Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_005284.1 Length=54865 Score E Sequences producing significant alignments: (Bits) Value seq276787 194 6e-45 seq233314 89.7 2e-13 >seq276787 Length=256 Score = 194 bits (214), Expect = 6e-45 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 5152 TCGTCCTGAATCCGATCGACTGGGCGTCGATCGAGTTGACGAAGGACAGCCAGGGGCGAT 5211 |||| ||||| ||||||||||||||| ||||||| | |||||||||| |||||| || | Sbjct 30 TCGTGCTGAACCCGATCGACTGGGCGACGATCGAACTCACGAAGGACACCCAGGGCCGCT 89 Query 5212 ACATCGTCGGCAATCCGGTCAACGGTACGACGCCGCGCCTGTGGAATCTGCCGGTCGTTG 5271 ||||| ||||| | |||| | | || | |||||| |||||||| |||||||| || | Sbjct 90 ACATCATCGGCGACCCGGCCGAGGGCGTGCAGCCGCGGCTGTGGAACCTGCCGGTGGTCG 149 Query 5272 AAACGCAGGCGATGACTGCGAACGAATTCCTCGTCGGCGCCTTCTCGATGGCGGCTCAGA 5331 || |||||| | | |||| |||||| ||| |||||| || ||||| |||| Sbjct 150 CGACCCAGGCGCAGGCGCAGAACCGGTTCCTCACCGGAGCCTTCGATATCGCGGCGCAGA 209 Query 5332 TCTTCGACCGCATGGAGATCGAGGTTCTTCTGTCGACCGAGAACGTC 5378 ||||||| ||||||||||||||||| | |||||||||||||||||| Sbjct 210 TCTTCGATCGCATGGAGATCGAGGTGTTGCTGTCGACCGAGAACGTC 256 >seq233314 Length=675 Score = 89.7 bits (98), Expect = 2e-13 Identities = 213/314 (68%), Gaps = 6/314 (2%) Strand=Plus/Minus Query 4722 ATGACGATTCGCGATTTGCTCATGCCGGGCCAGACGTCGTCGAGTAGCATCGAGTACACC 4781 |||||| |||| ||| | ||| ||| |||| || |||| ||| ||||| | Sbjct 400 ATGACGGTTCGGGATCTCATCACGCCCGGCCGCACCAACTCGAACGCGATCCAGTACGTC 341 Query 4782 GTCGAAACCGGCTTCACGAACAACGCAGCGGCAGTAGCCGAAGGCGCACAGAAACCGACT 4841 || ||||| ||| ||||| ||| ||||| || |||||||||| | ||| || Sbjct 340 CAGGAGACCGGGTTCGTGAACAGCGCCGCGGCGGTCGCCGAAGGCGTGCTGAAGCCCGAG 281 Query 4842 TCGGATCTGAAGTTCAATCTGAAGAACCAGCCGGTTCGCA-CGATCGCACATCTGTTCAA 4900 ||| |||||||| | || |||| |||||| |||| ||||||| ||| | | | Sbjct 280 TCGAGCATGAAGTTCGACCTCAAGACGGTGCCGGT-CGCAACGATCGCCCATTGGGTGCA 222 Query 4901 GGCGTCGCGTCAGATTCTCGACGATGCGCCGGCACT-GCAATCGTATATCGACGGCCGTG 4959 ||| ||| || || |||| |||||||||| || || | | || ||||| ||||| Sbjct 221 GGCATCGAAGCAAATCCTCGCCGATGCGCCGATGCTCGCGAGC-TACATCGATGGCCGGC 163 Query 4960 CCCGGTACGGGCTTCAACTCA-CCGAGGAAGGCCAAATTCTGAAGGGCGATGGTACCGGG 5018 || ||||| || | || ||||||| || | || ||||||||||| || || Sbjct 162 TGCGTTACGGCCT-CGCCTATGCCGAGGAGCTTCAGCTGCTCAAGGGCGATGGAACGGGA 104 Query 5019 GCGAACATTCTCGG 5032 ||||| |||| || Sbjct 103 TCGAACCTTCTGGG 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 174869118073642