Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq27512 208 2e-48
seq28654 196 1e-44
seq27511 196 1e-44
seq76306 158 3e-33
seq41046 141 2e-28
seq7533 107 4e-18
seq100037 104 5e-17
seq72971 100 7e-16
seq20524 96.9 8e-15
>seq27512
Length=242
Score = 208 bits (230), Expect = 2e-48
Identities = 183/228 (80%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||| || | |||||||| |||||| |||||||||||||||||||| ||||| |||
Sbjct 1 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCTGAT 60
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
|| || | || || || || || |||||||||||||| ||||| ||||| || |||||
Sbjct 61 AGTGTACGTCCATCCTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGA 120
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| ||||| ||||| ||||| ||||| || |||||||| | || || || || ||
Sbjct 121 ATGCCTTCCTTATCTTGAATTTTTGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACT 180
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| ||||| |||||||| ||||| ||||| ||||||||||| ||||||
Sbjct 181 TCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 228
>seq28654
Length=3315
Score = 196 bits (216), Expect = 1e-44
Identities = 164/201 (82%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||||||||| ||||||||||||||||| ||||| | |||||||| | ||| ||||||
Sbjct 2418 GTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTCTTCCAATTGCTTTCCA 2477
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| | | |||||||| ||||| || ||||| || || ||||| || ||||||
Sbjct 2478 GCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATTTTGGCTTTT 2537
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|||||||| | |||||| |||||| || || | ||||| || ||||| |||||||||
Sbjct 2538 ACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTTTTACCCGTAAGTGTT 2597
Query 104543 TTTACAAATATCTGCATTTTG 104563
|| ||||| ||||||||||||
Sbjct 2598 TTCACAAAGATCTGCATTTTG 2618
Score = 188 bits (208), Expect = 2e-42
Identities = 173/219 (79%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
|||| | ||||| ||||| |||||||| || ||||||||||| ||||||| || |
Sbjct 2169 AGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGG 2228
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| ||||| |||||||||||||||||||| |||||||||||||| || || || || |||
Sbjct 2229 CCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCT 2288
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521
|| || || |||||||| || |||||||| | || ||| || |||||||||| ||
Sbjct 2289 TTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTG 2348
Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || || || ||||| || || ||||| |||||||||
Sbjct 2349 ATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 2387
Score = 172 bits (190), Expect = 1e-37
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| | |||||||| || || ||||||||||| || || || ||||||
Sbjct 1929 ATACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCA 1988
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | ||| ||||||| ||| || || |||||||| || | |||||||| |||
Sbjct 1989 GACAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGA 2048
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || || || || ||||| |||||||| | || || || |||
Sbjct 2049 GGAATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCA 2108
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| |||| ||||| || || ||||| |||||||| ||||| || |||||
Sbjct 2109 ACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 2158
Score = 168 bits (186), Expect = 2e-36
Identities = 180/237 (76%), Gaps = 2/237 (1%)
Strand=Plus/Plus
Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382
||||| || || |||| || | ||||||| ||| | ||||| ||||| || || ||
Sbjct 1466 TATTTGCATACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTT 1525
Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442
|||||||| || || | ||| |||||||| || || |||||||| || || | |||||
Sbjct 1526 GTAGTCAGACAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTG 1585
Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502
||| || || || || |||||||| |||||||| || ||||||||||| | ||| ||
Sbjct 1586 ATCTGGGGGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGA 1645
Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || ||||| || || |||||||| || || ||||| || |||||||| |||||
Sbjct 1646 TGGCTCCACCTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 1702
Score = 165 bits (182), Expect = 2e-35
Identities = 175/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||| || | ||||| | || | || || |||||||| ||||| ||||||
Sbjct 1017 ATACCTCCTCGGAGACGGAGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCA 1076
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || ||||| |||||||| ||||| || || || | |||||||| |||
Sbjct 1077 GACAGGGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGA 1136
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| |||||||| ||||| |||||||| ||||| |||||||| | ||| || || ||
Sbjct 1137 GGAATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCA 1196
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || | || || || || |||||||||||||| |||||||| ||||||
Sbjct 1197 ACTTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 1247
Score = 163 bits (180), Expect = 7e-35
Identities = 179/237 (76%), Gaps = 2/237 (1%)
Strand=Plus/Plus
Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382
||||| ||||| || | || | ||| |||| || | || || ||||||||||||||
Sbjct 1238 TATTTGCATTCCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATT 1297
Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442
|| ||||| | ||| | ||| ||||| | ||| |||||||||||||| || | ||||||
Sbjct 1298 GTAATCAGACAAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAAAATGAGACGCTGTTG 1357
Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502
|| || || || || || |||||||| || || ||||| ||||| || | || ||
Sbjct 1358 GTCTGGGGGGATGCCCTCCTTATCCTGTATTTTAGCTTTGACATTCTCGATTGTGTCAGA 1417
Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||||| || || ||||| ||||| ||||| | |||||| |||||||| |||||
Sbjct 1418 TGGTTCTACTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 1474
Score = 163 bits (180), Expect = 7e-35
Identities = 179/237 (76%), Gaps = 2/237 (1%)
Strand=Plus/Plus
Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382
||||| || || |||| || | ||||||||||| | ||||| || || || || ||
Sbjct 1694 TATTTGCATACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTT 1753
Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442
|||||||| || || | ||| ||||| | ||| || |||||||| || || | ||| ||
Sbjct 1754 GTAGTCAGAGAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTG 1813
Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502
|||||| || || || ||||| || || || || |||||||||||||| | |||||
Sbjct 1814 ATCAGGTGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGA 1873
Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || ||||| ||||| ||||| || ||||| ||||| ||||||||
Sbjct 1874 GGGTTCCACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930
Score = 154 bits (170), Expect = 3e-32
Identities = 156/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || || || ||||||||||||||||||||||| ||||| | || || || || ||
Sbjct 816 TGCAAAGTGGACTCTTTCTGAATATTATAGTCAGAGAGAGTACGGCCATCCTCCAGCTGC 875
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||| ||||| || | |||||||| || || || || ||||| || || |||||
Sbjct 876 TTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTTA 935
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
||||| |||||||| | || || ||||| || |||| ||| ||||| || || ||
Sbjct 936 GCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTCCCTGTC 995
Query 104537 AGTGTTTTTACAAATATCTGCAT 104559
||||| |||||||| ||||||||
Sbjct 996 AGTGTCTTTACAAAGATCTGCAT 1018
Score = 150 bits (166), Expect = 4e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
|||||||| ||| || ||||||||||| || || |||||||| || ||||| | || ||
Sbjct 578 AAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATC 637
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|||| ||||| |||||||| || || | |||||| || || || || || || || ||
Sbjct 638 CTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTC 697
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|| ||||| || || |||||||| | || ||| || || ||||| | || || ||
Sbjct 698 TTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGT 757
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| |||||||| || || ||||| ||||||||
Sbjct 758 CTTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 790
>seq27511
Length=800
Score = 196 bits (216), Expect = 1e-44
Identities = 174/218 (80%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| ||||| |||| |||||||| || || ||||||||||||||||| || || |||
Sbjct 218 ATTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCA 159
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
||||| || | || ||||| || || |||||||||||||| || || || ||||| ||
Sbjct 158 GATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGG 99
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| ||||| |||||||||||||| |||||||| |||||||| | ||||| ||| ||
Sbjct 98 GGAATTCCCTCTTTATCCTGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCA 39
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547
|| || | || |||||||| ||||| ||||| |||||
Sbjct 38 ACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTAC 1
Score = 194 bits (214), Expect = 4e-44
Identities = 195/252 (77%), Gaps = 5/252 (2%)
Strand=Plus/Minus
Query 104311 GTCTTTCCATACTTTATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGAT 104368
|||||| || | ||||| ||||| ||||| |||| ||||| || || || || |||
Sbjct 692 GTCTTTACAAA---TATTTGCATTCCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGAT 636
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||||||||| ||||||||||| || | || ||||| || || ||||||||||||
Sbjct 635 TCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAA 576
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || || || ||||| || || || || |||||||||||||| || || || ||||||
Sbjct 575 ATAAGTCTTTGCTGATCTGGGGGAATACCCTCTTTATCCTGAATTTTCGCCTTAACATTT 516
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | ||||| || ||| || || | || |||||||| ||||| ||||| ||||||
Sbjct 515 TCAATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACA 456
Query 104549 AATATCTGCATT 104560
|| || ||||||
Sbjct 455 AAAATTTGCATT 444
Score = 187 bits (206), Expect = 6e-42
Identities = 180/231 (78%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || || || | || || | || || |||||||| |||||||||||||| ||
Sbjct 446 ATTCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTCTGAATATTATAATCT 387
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | || | || ||||| || |||||||| |||||||| ||||||||||| ||||||
Sbjct 386 GACAATGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGA 327
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || ||||||||||| || |||||||||| ||||| || |||
Sbjct 326 GGAATGCCTTCTTTGTCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCC 267
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || | || ||||| || ||||| ||||| |||||||| || ||||||
Sbjct 266 ACTTCCAAAGTGATAGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 216
Score = 111 bits (122), Expect = 4e-19
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491
|| || || ||||| || || ||||| |||||||||||||| || || || ||||||||
Sbjct 800 AGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCA 741
Query 104492 ACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAAT 104551
| ||||| || ||| || || | ||| |||||||| ||||| ||||| |||||||||
Sbjct 740 ATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAT 681
Query 104552 ATCTGCATT 104560
|| ||||||
Sbjct 680 ATTTGCATT 672
>seq76306
Length=316
Score = 158 bits (174), Expect = 3e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || ||||| | | |||| || || |||||||| ||||| |||||||||||
Sbjct 286 ATTCCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCT 227
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | || | || ||||| ||||| ||||| || ||||| || || |||||||| |||
Sbjct 226 GACAATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGA 167
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || ||||||||||| ||||| ||||| | ||||| || |||
Sbjct 166 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCC 107
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | ||| || || || ||||| | |||||||| || || |||||
Sbjct 106 ACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 57
>seq41046
Length=7774
Score = 141 bits (156), Expect = 2e-28
Identities = 163/218 (75%), Gaps = 1/218 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || ||||| ||||| ||||| || ||||| || |||||||| | || | || ||
Sbjct 7169 AAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATC 7228
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|||||||||||| |||||||| || | | || || || || || || ||||| |||||
Sbjct 7229 TTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATC 7288
Query 104467 CTGAATCTTTGCTTTT-ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAG 104525
|| || || |||||| |||||||||| ||||| | || ||||| || ||||| |
Sbjct 7289 TTGGATTTTAGCTTTTAACATTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGG 7348
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
| ||||| ||||| || || || || || |||||| ||
Sbjct 7349 TTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTG 7386
>seq7533
Length=2710
Score = 107 bits (118), Expect = 4e-18
Identities = 123/164 (75%), Gaps = 1/164 (1%)
Strand=Plus/Plus
Query 268855 TCTT-GCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCT 268913
|||| || || ||||| | | ||||||||| ||||| || || | || ||| || |
Sbjct 863 TCTTAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGAACTTGGTGGAGCGTTTTT 922
Query 268914 GTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAA 268973
|||||||| || | |||||||||| || || || || || || || ||||| ||||
Sbjct 923 CACAAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGTTTTCAAATTGCTATGGAAA 982
Query 268974 ATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATA 269017
|| ||||||||||||||||| | ||||||| || || ||||||
Sbjct 983 ATGTTCATTCAGAGATGTACTCTTTATTAATTGACACATATATA 1026
>seq100037
Length=1801
Score = 104 bits (114), Expect = 5e-17
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 237987 CAAGTTGACGCTCACAATATTGTACCTTGTTGGGAAGCATCTCATAAACAAGAATACGGT 238046
|| || || ||||||||| | || || ||||||| || ||| ||||||| |||||
Sbjct 277 CAGGTAGATGCTCACAATGTGGTGCCATGTTGGGTGGCTTCTGATAAACAGGAATATTCA 218
Query 238047 GCTAGAACATTACGTAAGAAAATAAATGGTATGTTAGATACATATCTTACAGAATTTCCT 238106
|| |||||| || | || ||||| ||| || |||||| |||||||||||||||||||
Sbjct 217 GCAAGAACAATAAGAAATAAAATCAATTCTAAATTAGATGAATATCTTACAGAATTTCCT 158
Query 238107 GTAATAACTAAACATCCTTA 238126
| | | ||||||||||||
Sbjct 157 CCAGTTATTAAACATCCTTA 138
>seq72971
Length=665
Score = 100 bits (110), Expect = 7e-16
Identities = 148/209 (71%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413
||||||| || ||||| || ||||| ||||| |||||||||||||| || || | ||||
Sbjct 216 AGATGTAGAGTCGATTCATTATGAATGTTATATTCAGATAGAGTTCTTCCATCATTTAGT 275
Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473
||||| || |||| |||| || || | ||| ||| || ||||| | || | |||
Sbjct 276 TGTTTGCCTTCAAATATTAATCTGTGATATTCATGAGAGATGCCTTCCCTTTCGTAAATT 335
Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533
|| | || |||| ||||||||| | | ||||| || | || | | | ||
Sbjct 336 TTAGACTTCACATGTTCTACGGTGTTAGTGGGTTCAACTGCGAG---GACAACGTGGCCC 392
Query 104534 GTAAGTGTTTTTACAAATATCTGCATTTT 104562
|| || | |||||| || |||||||||||
Sbjct 393 GTGAGGGATTTTACGAAAATCTGCATTTT 421
>seq20524
Length=616
Score = 96.9 bits (106), Expect = 8e-15
Identities = 147/209 (70%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413
||||||| || |||| || ||||| ||||| |||||||||||||| || || | ||||
Sbjct 168 AGATGTAGAGTCGATTTATTTTGAATGTTATATTCAGATAGAGTTCTTCCATCATTTAGT 227
Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473
||||| || |||| |||| || || | ||| | | || |||||| | || | |||
Sbjct 228 TGTTTGCCTTCAAATATTAATCTTTGATATTCATGGGAGATGCCTTCTCTTTCGTAAATT 287
Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533
|| | || |||| ||||||||| | | ||||| || | || | | | ||
Sbjct 288 TTAGACTTGACATGTTCTACGGTGTTAGTGGGTTCAACTGCGAG---GACAACGTGGCCC 344
Query 104534 GTAAGTGTTTTTACAAATATCTGCATTTT 104562
|| || | |||||| || |||||||||||
Sbjct 345 GTGAGGGATTTTACGAAAATCTGCATTTT 373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1147310790675764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |