Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq10526 206 2e-48
seq41046 87.8 2e-12
>seq10526
Length=5062
Score = 206 bits (228), Expect = 2e-48
Identities = 782/1206 (65%), Gaps = 47/1206 (4%)
Strand=Plus/Minus
Query 30232 TACTTTGTAGAGTGGGGTGTTTACGACAGACAATATCCAGCAGA-CTTAGTTCCCGTCCC 30290
||||| ||||| |||||||| || || ||| || | || | || | || | ||
Sbjct 4117 TACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTA-TACCTATACC 4059
Query 30291 CAACCTTACGCATCTTTTGTATGGCTTTGTGCCTCTCTGCGGTGGAGATGGTATAAACGA 30350
|| ||||| ||| | | || |||||| | || | ||||| || || || || || ||
Sbjct 4058 TAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATTAATGA 3999
Query 30351 TAGCTTAAAGCAAGTGCCGGGTTCGTTTGAGGCTTTACAAAAATCTTGCGCGGGTCGAGA 30410
||| ||||| | | || || | || |||| ||| || || || ||
Sbjct 3998 TAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGATCCTGTAGCGGCCGTGA 3939
Query 30411 GGATTTTAAAGTGACGATTCACGATATTTGGGGCGCTCTTCAAAAACCACAAAAAGGAGT 30470
||| || ||||| | || |||||| |||| || | |||||||||||||||||| |
Sbjct 3938 GGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATT 3879
Query 30471 GGGCGCTTGGGACGATCCGTATAAAGGAAATTTTGGCCAACTGATGGCGATTAAAAGACA 30530
| | ||| |||| || || ||||| || ||||||||| | ||| | | |||||
Sbjct 3878 GTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTC-ACTAAAA---- 3824
Query 30531 CAATCCCGACCTTAC-----GATTTTACCGTCTATTGGCGGGTGGACACTTAGCGACCCT 30585
||| |||| ||| | |||| | || |||||||| |||||||| ||| ||| |||
Sbjct 3823 CAAGCCCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCCGATCCT 3764
Query 30586 TTCTTTAAATTGAGTTCTGCCGAA---AATCGCGC-CGTTTTCGTTGAGTCCGCACGAGA 30641
||||| || |||| | | || || | | || ||| || |||| | | ||
Sbjct 3763 TTCTTCTTTTT-AGTT--GACAAATCTAAGAGAACACGATTT-GTGCAGTCAGTAAAGGA 3708
Query 30642 GTATTTGCGCACATGGAAATTTTTTGACGGACTAGACATCGACTGGGAGTTTCCGGGCGG 30701
|| | | | ||||||||||| || || || | || ||||| |||||||| || || ||
Sbjct 3707 GTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGG 3648
Query 30702 TAAAGGTGCTAATCCCGAATTAGGAGATCCAGAAAAGGATGGAGTAACATATGTGCAGTT 30761
||||||||||| || || | || |||||| ||||| | ||||| ||
Sbjct 3647 CAAAGGTGCTAACCCTGACCTCGGTAGCCCAGAA---GATGGTGATTGTTATGTAAGTTT 3591
Query 30762 ATTGAAAGAGCTCAGAGAAATGCTAAACGATCTTTCT--AAAGAAACAGGGAAAAAATAC 30819
||||||| | | || ||||| | || || ||| ||||| || || ||||||
Sbjct 3590 GATGAAAGAATTACGTGAGATGCTCGATGAGCTCTCTGCTAAGAA--TGGTAAGAAATAC 3533
Query 30820 CAGCTCACCTCGGCGATTAGCGCGGGGTACGATAAAATCTCTATAGTTAATTATGAAAAT 30879
| | || || || |||||||| || | ||||||||| | ||| | |||| ||
Sbjct 3532 GAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTTGTTGACTATGGTAAG 3473
Query 30880 GCGCAAGAGTATCTTGATCACATTTTTGTTATGACGTACGATTTTAAAGGCGCTTGGTCT 30939
|| ||| | ||| | ||||| ||||| | |||| ||||| || || || || |||||
Sbjct 3472 GCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTC- 3414
Query 30940 AACACGGACT-TGGGATATCACACTACACTTTATTCACCCTCTTGGAACGCTGAAGAAAA 30998
|| ||| | ||| |||| || || | || | || | ||||| | | ||||
Sbjct 3413 AAATGATACTCTTGGACATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAAC 3354
Query 30999 ATATACTGCCGAGTACGCGACAAAGGAGTTGTTAAAACAAAACGTCAATAGTAAGAAAAT 31058
|| || | || | | ||| | ||| | || || ||| |||||| ||
Sbjct 3353 TTACACATCTGACTTTGGAGTAAAATACTTGCTGGCGCAGGGAGTGAATCCTAAGAAGAT 3294
Query 31059 AGTGCTAGCTGTTGCAATGTACGGAAGAGGGTGGACGGGTGTGCATGACATAAAAAACAA 31118
|| ||| |||||| ||||| || | || ||||| || || ||||| || ||||
Sbjct 3293 TGTAGTAGGTGTTGCTATGTATGGTCGTGGCTGGACTGGCGTTCATGATTACGAAGACAA 3234
Query 31119 CAATCCCTTTACGGGTGTAGCTCAGGGGCCGATTAAAGGAACTTGGGAAAGTGGAGTTGT 31178
|| |||||| || || ||| || || | |||||||||||| || ||||| ||
Sbjct 3233 CATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGGAGTGGT 3174
Query 31179 AGATTACA--AAGATT-----TGATA----CAAAGGTACACCGACACTT--ATTATGACT 31225
|| |||| ||||| ||| | |||| | | | | || |||| |||
Sbjct 3173 TGACTACAGGGAGATTGCGAATGAAATTGCTCAAGGCA-AGTGGGAGTTCCATTACGACA 3115
Query 31226 CTGTAGCGCAAGCGGCATATGCGTTCGCAGAGAAT--GTTGGTGATCTACTTACTTACGA 31283
||| || ||||| | ||| ||| |||| || ||| ||||| | || || ||
Sbjct 3114 ATGTCGCCCAAGCCCCCTAT--GTTTTCAGACCATCAACTGGAGATCTTGTAACCTATGA 3057
Query 31284 TAACCCAACGAGTGTGCAAGCTAAGGGAAAGTTTGTAATAGACAACAATTTGGGTGGTTT 31343
||| | | ||| | ||||| || | ||||| | | ||||| | |||||| |
Sbjct 3056 TAATGCTAGATCTGTTATTGAAAAGGGTAAATATGTAAGAAATAACAAGCTAGGTGGTCT 2997
Query 31344 GTTTGCGTGGGAACTGGACGCCGACAATGGCGACATTCTTAACAGCATGAACGAGGGTTT 31403
||||| |||||| ||||||| || ||||| ||| | || || ||||||| |||| |
Sbjct 2996 CTTTGCTTGGGAAGTGGACGCTGATAATGGTGACCTACTGAATGCCATGAACATGGGTCT 2937
Query 31404 AGGTAA 31409
|||||
Sbjct 2936 CGGTAA 2931
>seq41046
Length=7774
Score = 87.8 bits (96), Expect = 2e-12
Identities = 161/234 (69%), Gaps = 3/234 (1%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||||||||| | | | ||| | ||| | |||| ||||||||||||||||| ||||
Sbjct 7154 ACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGA 7213
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|||| || | || || || || ||||| | | || ||||| ||||| || ||
Sbjct 7214 CAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGG 7273
Query 48619 CACACTTTCCTTGTCCATAATTTT--CTGCTTGATAGACGCTATGGTATCGGTAGACTCC 48676
| || |||||| || ||||| || || | | |||| ||||| | | ||||
Sbjct 7274 AATACCTTCCTTATCTTGGATTTTAGCT-TTTAACATTTTCTATAGTATCAGAGGCCTCC 7332
Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730
||||| || ||||||||||| || || || || || ||||| ||||| |||
Sbjct 7333 ACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTG 7386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419828656155083
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |