Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq243145 131 3e-26 seq275 127 3e-25 >seq243145 Length=620 Score = 131 bits (144), Expect = 3e-26 Identities = 186/262 (71%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||| || ||| | | | || | || ||||||||||| |||||||| |||||||| Sbjct 265 CGCTAAACGCCATAGAAAAGTACTCAGGGACAACATCCAAGGCATCACCAAACCAGCTAT 324 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | || | ||||| ||||| ||||| | || || || | || ||||| | Sbjct 325 AAGAAGATTAGCAAGACGTGGCGGAGTTAAGCGCATTTCCGGTTTAATTTACGAAGAAAC 384 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||||||||||| || || | | || ||| ||||| | ||||| || Sbjct 385 GCGTGGAGTTTTGAAGATTTTTCTAGAAAATGTCATCAGAGATGCCGTAACTTATACTGA 444 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| | |||||||| ||| |||||||| | || || || |||||| | ||||| Sbjct 445 ACACGCTAAAAGGAAGACTGTTACCGCCATGGATGTGGTTTACGCGTTGAAAAGACAAGG 504 Query 16672 CCGTAAGATTTATGGTTTTGGA 16693 ||| | | ||||| |||||| Sbjct 505 CCGCACCTTGTATGGATTTGGA 526 >seq275 Length=3821 Score = 127 bits (140), Expect = 3e-25 Identities = 193/275 (70%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| | | | || || ||||||||||| || ||||| ||||| || ||| Sbjct 2957 GCGAAGCGTCACAGGAAAGTGCTGCGCGATAACATCCAGGGCATCACGAAGCCGGCCATC 2898 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || || | || || ||||| ||| | || || || | || || |||| | Sbjct 2897 CGTCGTCTCGCCCGCAGGGGCGGCGTCAAACGTATATCCGGCCTGATATACGAGGAGACT 2838 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || ||||| | |||||| ||| || |||| || || || || || ||| Sbjct 2837 CGCGGAGTGCTGAAGGTGTTCCTCGAGAATGTGATCCGCGACGCCGTCACGTACACGGAG 2778 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | ||||| |||||| ||||||| |||| || || |||| || || || Sbjct 2777 CACGCCAAGAGGAAGACCGTCACCGCCATGGACGTCGTGTACGCCCTGAAGCGGCAGGGG 2718 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAA 16707 || | | || || || || |||||| || ||| Sbjct 2717 CGCACTCTGTACGGCTTCGGCGGTTAATATTTTAA 2683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78821861073519