Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq243145 131 3e-26
seq275 127 3e-25
>seq243145
Length=620
Score = 131 bits (144), Expect = 3e-26
Identities = 186/262 (71%), Gaps = 0/262 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||| || ||| | | | || | || ||||||||||| |||||||| ||||||||
Sbjct 265 CGCTAAACGCCATAGAAAAGTACTCAGGGACAACATCCAAGGCATCACCAAACCAGCTAT 324
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | || | ||||| ||||| ||||| | || || || | || ||||| |
Sbjct 325 AAGAAGATTAGCAAGACGTGGCGGAGTTAAGCGCATTTCCGGTTTAATTTACGAAGAAAC 384
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||||||||||| || || | | || ||| ||||| | ||||| ||
Sbjct 385 GCGTGGAGTTTTGAAGATTTTTCTAGAAAATGTCATCAGAGATGCCGTAACTTATACTGA 444
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||||||| | |||||||| ||| |||||||| | || || || |||||| | |||||
Sbjct 445 ACACGCTAAAAGGAAGACTGTTACCGCCATGGATGTGGTTTACGCGTTGAAAAGACAAGG 504
Query 16672 CCGTAAGATTTATGGTTTTGGA 16693
||| | | ||||| ||||||
Sbjct 505 CCGCACCTTGTATGGATTTGGA 526
>seq275
Length=3821
Score = 127 bits (140), Expect = 3e-25
Identities = 193/275 (70%), Gaps = 0/275 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| | | | || || ||||||||||| || ||||| ||||| || |||
Sbjct 2957 GCGAAGCGTCACAGGAAAGTGCTGCGCGATAACATCCAGGGCATCACGAAGCCGGCCATC 2898
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||| || || | || || ||||| ||| | || || || | || || |||| |
Sbjct 2897 CGTCGTCTCGCCCGCAGGGGCGGCGTCAAACGTATATCCGGCCTGATATACGAGGAGACT 2838
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | || ||||| | |||||| ||| || |||| || || || || || |||
Sbjct 2837 CGCGGAGTGCTGAAGGTGTTCCTCGAGAATGTGATCCGCGACGCCGTCACGTACACGGAG 2778
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || | ||||| |||||| ||||||| |||| || || |||| || || ||
Sbjct 2777 CACGCCAAGAGGAAGACCGTCACCGCCATGGACGTCGTGTACGCCCTGAAGCGGCAGGGG 2718
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAA 16707
|| | | || || || || |||||| || |||
Sbjct 2717 CGCACTCTGTACGGCTTCGGCGGTTAATATTTTAA 2683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 78821861073519
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |