Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_006658.1
Length=30655
Score E
Sequences producing significant alignments: (Bits) Value
seq1231 114 3e-21
>seq1231
Length=2775
Score = 114 bits (126), Expect = 3e-21
Identities = 348/527 (66%), Gaps = 28/527 (5%)
Strand=Plus/Minus
Query 4474 AAAAATAATTATGTTATTCACTATAAAAA---TTTGAAACAATGTTTAGATTTA-GGTTT 4529
||||| || |||||||| || |||| ||| |||| |||||| ||| || |||||
Sbjct 1030 AAAAAAAAATATGTTATACATTATAGAAACCTTTTG---CAATGTG-AGAAATATGGTTT 975
Query 4530 ---AGTTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATC 4586
||| | | ||| | || ||| || ||||| ||||| | ||| | |||
Sbjct 974 GCGAGTAC---AAAAAGTTCATAGAGTATTAAAATTCAAGCAAAAACCTTGGTTAAAAAA 918
Query 4587 ATATATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTT 4646
|||||| || ||| || || |||| |||| | || || |||||| | ||
Sbjct 917 ATATATTGAATTAAACACTCAATTACGAACTTTAGCAACATCCGACTTTGAAAAAGATTT 858
Query 4647 TTATAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAAATATAA 4706
|||||| | ||||||||| | || ||||||||||| ||||| ||| | |||||| | |
Sbjct 857 TTATAAGCTGATGAATAATTCTGTATTTGGAAAGACAATGGAAAATAT-CGAAAAAAGAG 799
Query 4707 -AGATATATATTTAAGAACAAAGTGGCAAAGTCA-------ATACAATGTATCG-GATTT 4757
| | | | ||| |||| | ||| ||| ||| || || || | | || |
Sbjct 798 TAAACGTGAAATTATTAACACATTGGGAAAATCATGGAAAAATCAAAGGTGTTGAGAGTC 739
Query 4758 AGTATG-TAGACCAAACTTCCACAGCCTTACAATTTTTGATGAGGATATGGTTATAGTTG 4816
|| | | || | |||||||| ||| | |||||| ||| || |||| |||
Sbjct 738 TCATTGCTCGCCCCGAATTCCACAGTCTTTCCATTTTTTCTGAAAATTTGGTCGCAGTCC 679
Query 4817 AACTTAAAAAAGCTAGAGTTTGCTTCAACAAGCCGATCTATGTAGGGTTTAGTATATTAG 4876
||||| ||| ||| | | | | || ||||| || ||| |||| ||||| |||||||
Sbjct 678 AACTTCGCAAAACTAAATTGTTTTATAATAAGCCCATATATTTAGGTTTTAGCATATTAG 619
Query 4877 ATTTATCTAAAATTTATATTTATGACTTTCATTACAATTATGTTATGCAAAATTATGTAA 4936
| |||| || | || || ||||||||||| || | || ||| ||||| | | |
Sbjct 618 AGATATCCAAGACTTTAATGTATGACTTTCACTATCAGTA---CATGAAAAATAAATTTA 562
Query 4937 ATACCTCAAAATTATTGTACACTGACACAGATAGTCTAATTTACCAA 4983
| | |||||| || || ||||| || |||||||| || ||||||
Sbjct 561 CCAACATAAAATTGTTATATACTGATACTGATAGTCTGATATACCAA 515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97652028891982
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |