Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq7533 111 2e-19
seq141872 95.1 1e-14
seq56708 86.0 7e-12
>seq7533
Length=2710
Score = 111 bits (122), Expect = 2e-19
Identities = 160/219 (73%), Gaps = 5/219 (2%)
Strand=Plus/Minus
Query 21477 ATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAAC 21536
|| |||||| || | || |||| |||||||| || | ||||||| || || || |
Sbjct 1879 ATACAAAATTACGAAACATACCT-CATCCCTAGAAATAAGTTCATTACTGAAAGTCAATC 1821
Query 21537 CGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT-CCTGAAAAGAAA 21595
||||||| | |||| ||||| |||||||||||||| ||||| ||| ||||| || ||
Sbjct 1820 CGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCAAA-GCTGCCTGAGAAAAAT 1762
Query 21596 ATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGAT-TCTTTATCCAA 21654
|| |||||||| || ||||| |||| || ||||| || |||||| | |||| | |
Sbjct 1761 ATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAATGTAGCTGTCTTGCTGC-C 1703
Query 21655 TATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACA 21693
||||| | | ||||| | |||||| | |||| |||
Sbjct 1702 GATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACA 1664
>seq141872
Length=750
Score = 95.1 bits (104), Expect = 1e-14
Identities = 107/141 (76%), Gaps = 2/141 (1%)
Strand=Plus/Minus
Query 21125 ATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATT 21184
|||||||| ||||||||||| | ||||||||| || || | ||| | ||||
Sbjct 749 ATTTAAAATTCAGCATCTAAAGTGAAAACATTGTCCATAGGTTGCGCCATCACTCCCCAC 690
Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATAT-AGA 21243
|| || || || | |||| | || || || |||||||| || ||||||||||| || |||
Sbjct 689 TTCTGGTATTCTCCAACTTTCTTCTCAAAGAAATTTGTTTTGCCTTCCAATGAGATGAGA 630
Query 21244 TTCCATAAAATCAAATGGATT 21264
|| ||||||||| ||||||||
Sbjct 629 TT-CATAAAATCGAATGGATT 610
>seq56708
Length=5257
Score = 86.0 bits (94), Expect = 7e-12
Identities = 216/323 (67%), Gaps = 8/323 (2%)
Strand=Plus/Plus
Query 131860 TCCTATGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGAAAAAGCAAT 131919
|| ||||||||| || ||| ||||| || || | ||| | || | |||| || ||
Sbjct 2028 TCTTATGACTCCAGTATTACCGATGTTAGCAGAAGCTTGCAAGTCAGTTGAAATGGCTAT 2087
Query 131920 AGATAAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCGTGTACAAAT 131979
| |||| | | |||| |||| ||| ||| ||||||||||||| || || || ||| |
Sbjct 2088 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 2147
Query 131980 TCATAAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGTTCTTACTCA 132039
|||||||| | |||| | ||| |||||| | |||||||| || | ||||
Sbjct 2148 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCA 2207
Query 132040 TAAAATTGATGGATTTGATAAACTGTTGA-CTGATGCATTTCCCACAGCAAAAAACTTCA 132098
||| || | |||| | | | | || | | | |||||||| | || | | | || |
Sbjct 2208 CAAAGTT-AGTCATTTTAAAGATTATTTACCCAAAGCATTTCCTAAAGGAGATGATTTGA 2266
Query 132099 TTTTAGATGCGGAATTAATAATGATAGAT-ACAAAA--TCAAATTCATTTTTACCATTTG 132155
| || ||||| ||| || | ||| | ||| ||| | ||| || || || || |
Sbjct 2267 TCTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCA---TTGCCTTTCG 2323
Query 132156 GTTCATTAGGTATACATaaaaaa 132178
|| |||||||||| || ||| ||
Sbjct 2324 GTACATTAGGTATTCACAAACAA 2346
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530058541632920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |