Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq170880 150 5e-31
seq257481 84.2 6e-11
seq26642 84.2 6e-11
>seq170880
Length=1133
Score = 150 bits (166), Expect = 5e-31
Identities = 328/481 (68%), Gaps = 15/481 (3%)
Strand=Plus/Plus
Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507
|| ||||||||||| ||| | ||||| || ||||| || ||||| || | || |
Sbjct 655 GAGCGCCCGCAGCACATGCTCATGCGCGTCGCTATCGGCATCCACGGCAACAACGTC-AC 713
Query 363508 GCC-GCGATTGAAACATATAAGCTTCTAAGTGCTCGT---GTA-TTCACGCACGCCACGC 363562
|| ||||| || || || || ||| || || ||| ||||| || ||| |||
Sbjct 714 GCGTGCGATCGAGACGTACAA----CTACATGTCCGAAAAGTACTTCACCCATGCCTCGC 769
Query 363563 CAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAA 363622
| || | | ||||||||| || | | || ||| | | |||||||| || | |
Sbjct 770 CCACCCTCTTCAATGCTGGCACGCCCCACCCCCAGCTTGCGTCTTGCTTCCTCGTGGCGA 829
Query 363623 TGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCA 363682
|||||||||| || |||||||| |||| ||||| || |||| || || | || ||||
Sbjct 830 TGAAGGACGACTCGATCGAGGGCATCTACGACACCCTGAAGACGTGCGCCATGATCTCCA 889
Query 363683 AGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA-CAGAACAGTTACATT 363741
||| || ||||| || || | || ||||| | ||||| | | | || |||||
Sbjct 890 AGACCGCCGGCGGTATCGGCCTCCACATTCACAACATCCGTGCCTCCGGA-AGCTACATC 948
Query 363742 CGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801
| |||||| ||||||||||| || | || |||||||| || || || |||| |||
Sbjct 949 GGTGGCACAAACGGATACTCGAACGGCATCGTGCCCATGCTCCGCGTCTTCAACAACACT 1008
Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAG 363861
|| | || |||||||||||||| |||||| || ||||| || || || || |||
Sbjct 1009 GCCCGCTATGTCGACCAGGGTGGGAACAAGCGCCCGGGTGCGTTCGCCATCTACCTTGAG 1068
Query 363862 CCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAA--AAGAG 363918
|| || |||| || |||| | || || ||||| || || || || || |||||
Sbjct 1069 CCGTGGCACCCCGACATCTTTGCCTGGCTCGATCTCCGCAAGAATCATGGCAAGGAAGAG 1128
Query 363919 G 363919
|
Sbjct 1129 G 1129
>seq257481
Length=676
Score = 84.2 bits (92), Expect = 6e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 65903 TATCTTCACTTGCCTTTACAAGACAACGCTGGATGTAACCACTGTTTGCAGTTTTTACCG 65962
|||||||| ||||| ||||||| ||||||||||||||| | | ||| || || ||||
Sbjct 86 TATCTTCAAGAGCCTTGACAAGACGGCGCTGGATGTAACCAGTCTCTGCGGTCTTGACCG 145
Query 65963 CGGTATCAACGAGACCTTCACGCCCGGACATTGCAGAAAAGAAAAACTCAGTCGGTTGTA 66022
| || |||| |||||||| || || | ||| ||| ||||| || || |||| |
Sbjct 146 CAGTGTCAATAAGACCTTCGCGTCCTGCCATGGCATGGAAGAAGAATTCCTGCGGTGTAA 205
Query 66023 GACCAAGCA 66031
||||| |||
Sbjct 206 GACCACGCA 214
>seq26642
Length=11175
Score = 84.2 bits (92), Expect = 6e-11
Identities = 106/143 (74%), Gaps = 2/143 (1%)
Strand=Plus/Plus
Query 65872 TTACGAATCGTTCCGTCATAATTGCACATAT-TATCTTCACTTGCCTTTACAAGACAACG 65930
||||| | ||||| ||||||| |||| | || || | ||||||| | || |||
Sbjct 8552 TTACGGACAGTTCCATCATAATGTACCATAACTGACTCCA-TAGCCTTTATTAAACGACG 8610
Query 65931 CTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGA 65990
||| ||||||||| | | ||||||||||| |||||||||| |||||||||||| ||
Sbjct 8611 CTGAATGTAACCAGTTTCAGCAGTTTTTACAGCGGTATCAATGAGACCTTCACGACCTCC 8670
Query 65991 CATTGCAGAAAAGAAAAACTCAG 66013
||| || || |||||||||
Sbjct 8671 CATGGCGTGGAAATAAAACTCAG 8693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1298726530578906
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |