Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq170880 150 5e-31 seq257481 84.2 6e-11 seq26642 84.2 6e-11 >seq170880 Length=1133 Score = 150 bits (166), Expect = 5e-31 Identities = 328/481 (68%), Gaps = 15/481 (3%) Strand=Plus/Plus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 || ||||||||||| ||| | ||||| || ||||| || ||||| || | || | Sbjct 655 GAGCGCCCGCAGCACATGCTCATGCGCGTCGCTATCGGCATCCACGGCAACAACGTC-AC 713 Query 363508 GCC-GCGATTGAAACATATAAGCTTCTAAGTGCTCGT---GTA-TTCACGCACGCCACGC 363562 || ||||| || || || || ||| || || ||| ||||| || ||| ||| Sbjct 714 GCGTGCGATCGAGACGTACAA----CTACATGTCCGAAAAGTACTTCACCCATGCCTCGC 769 Query 363563 CAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAA 363622 | || | | ||||||||| || | | || ||| | | |||||||| || | | Sbjct 770 CCACCCTCTTCAATGCTGGCACGCCCCACCCCCAGCTTGCGTCTTGCTTCCTCGTGGCGA 829 Query 363623 TGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCA 363682 |||||||||| || |||||||| |||| ||||| || |||| || || | || |||| Sbjct 830 TGAAGGACGACTCGATCGAGGGCATCTACGACACCCTGAAGACGTGCGCCATGATCTCCA 889 Query 363683 AGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA-CAGAACAGTTACATT 363741 ||| || ||||| || || | || ||||| | ||||| | | | || ||||| Sbjct 890 AGACCGCCGGCGGTATCGGCCTCCACATTCACAACATCCGTGCCTCCGGA-AGCTACATC 948 Query 363742 CGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801 | |||||| ||||||||||| || | || |||||||| || || || |||| ||| Sbjct 949 GGTGGCACAAACGGATACTCGAACGGCATCGTGCCCATGCTCCGCGTCTTCAACAACACT 1008 Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAG 363861 || | || |||||||||||||| |||||| || ||||| || || || || ||| Sbjct 1009 GCCCGCTATGTCGACCAGGGTGGGAACAAGCGCCCGGGTGCGTTCGCCATCTACCTTGAG 1068 Query 363862 CCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAA--AAGAG 363918 || || |||| || |||| | || || ||||| || || || || || ||||| Sbjct 1069 CCGTGGCACCCCGACATCTTTGCCTGGCTCGATCTCCGCAAGAATCATGGCAAGGAAGAG 1128 Query 363919 G 363919 | Sbjct 1129 G 1129 >seq257481 Length=676 Score = 84.2 bits (92), Expect = 6e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 65903 TATCTTCACTTGCCTTTACAAGACAACGCTGGATGTAACCACTGTTTGCAGTTTTTACCG 65962 |||||||| ||||| ||||||| ||||||||||||||| | | ||| || || |||| Sbjct 86 TATCTTCAAGAGCCTTGACAAGACGGCGCTGGATGTAACCAGTCTCTGCGGTCTTGACCG 145 Query 65963 CGGTATCAACGAGACCTTCACGCCCGGACATTGCAGAAAAGAAAAACTCAGTCGGTTGTA 66022 | || |||| |||||||| || || | ||| ||| ||||| || || |||| | Sbjct 146 CAGTGTCAATAAGACCTTCGCGTCCTGCCATGGCATGGAAGAAGAATTCCTGCGGTGTAA 205 Query 66023 GACCAAGCA 66031 ||||| ||| Sbjct 206 GACCACGCA 214 >seq26642 Length=11175 Score = 84.2 bits (92), Expect = 6e-11 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 65872 TTACGAATCGTTCCGTCATAATTGCACATAT-TATCTTCACTTGCCTTTACAAGACAACG 65930 ||||| | ||||| ||||||| |||| | || || | ||||||| | || ||| Sbjct 8552 TTACGGACAGTTCCATCATAATGTACCATAACTGACTCCA-TAGCCTTTATTAAACGACG 8610 Query 65931 CTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGA 65990 ||| ||||||||| | | ||||||||||| |||||||||| |||||||||||| || Sbjct 8611 CTGAATGTAACCAGTTTCAGCAGTTTTTACAGCGGTATCAATGAGACCTTCACGACCTCC 8670 Query 65991 CATTGCAGAAAAGAAAAACTCAG 66013 ||| || || ||||||||| Sbjct 8671 CATGGCGTGGAAATAAAACTCAG 8693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1298726530578906