Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq10526 302 4e-77
seq28654 111 1e-19
seq27511 104 2e-17
seq27512 98.7 9e-16
seq13366 96.9 3e-15
>seq10526
Length=5062
Score = 302 bits (334), Expect = 4e-77
Identities = 771/1158 (67%), Gaps = 33/1158 (3%)
Strand=Plus/Minus
Query 55653 AAAGGCGGTCGATATATAATGACCGTAAAGCTATGCAACTCGGACGGATGCACTTCGAGT 55712
||||| || |||| |||||| || |||| ||||| ||||| |||| ||| |||
Sbjct 4294 AAAGGTGGAAGATACCAAATGACAGTGGAGCTTTGCAATGAAGACGGCTGCAGTTCAAGT 4235
Query 55713 CAAGCGGTCGAAGTTGTAATCGCAGATACGGACGGTTCTCATCTTGCTCCGCTCTATTAC 55772
| | |||| |||| | || ||||| || || |||| | |||| || | ||
Sbjct 4234 GATCCCACCGAAATTGTCGTGGCCGATACCGATGGAAGTCATTTACCTCCTCTGGAATAT 4175
Query 55773 GAATATCAGGAATTAAATCAACCTTTCGAAACGCGAGTCGTGGATAAAATCGTTGCCGCA 55832
|| ||| |||| | || ||| || | || |||| ||| | || | ||
Sbjct 4174 ACATTGGGAGAAAAAAATAAGCCGTTC-AAGCAAACATC-TGGA-AAAGTTGTGGGTGCC 4118
Query 55833 TATTTTGTCGAGTGGGGTGTTTATCATAGAAACTTTCCTGTCACTCGAGTTCCCACTCCT 55892
|| || || || |||||||| |||| ||| || || || || ||| | || | |||
Sbjct 4117 TACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTATACCT 4058
Query 55893 AATCTGTCACACATTCTCTACGGATTCATACCGATATGCGGCGGCGACGGCATTAACGAC 55952
||||| | || | |||||||| || || || || |||||||| ||||||||||| ||
Sbjct 4057 AATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATTAATGAT 3998
Query 55953 AGTCTCAAGACGATAACCGGTAGTTTTGAAGCGCTTCAGCGATCGTGTTCGGGTCGAGAC 56012
||| | || ||| || ||||| |||| || |||||||| ||| || || ||
Sbjct 3997 AGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGATCCTGTAGCGGCCGTGAG 3938
Query 56013 GACTTCAAAGTGTCGATTCATGACCCGTGGGCTGCGGTCCAAAAGCCCCAAAAACAAGTG 56072
||||||||||| || || || || || ||||| || | ||||| || |||||| | ||
Sbjct 3937 GACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTG 3878
Query 56073 ACCGCATGGAACGAACCATACAAAGGCAACTTTGGACAATTGATGGCAGCTAAACTGGCG 56132
| |||||||||| || ||||||||||||||||| ||||| ||| || |||| ||
Sbjct 3877 TCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAAGC- 3819
Query 56133 AATCCCCATG--TTAAAG-TGCTGCCTTCGATCGGTGGCTGGACTTTATCCGATCC---G 56186
| || || || ||| | || || || || ||||| ||||| | |||||||
Sbjct 3818 --CCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCCGATCCTTTC 3761
Query 56187 TTCTTTTACTTTCACGATGCGGTCAAACGCAAAATTTTTGTCGATTCTGTCGTCGAGTTT 56246
||||||| || || | | || | | | ||||| | || || ||||||
Sbjct 3760 TTCTTTTTAGTTGACAAATC---TAAGAGAACACGATTTGTGCAGTCAGTAAAGGAGTTT 3704
Query 56247 TTACAGACCTGGAAATTTTTCGATGGTGTCGACATCGACTGGGAGTTTCCCGGCGGAAAG 56306
| | || |||||||| ||||||||||| || ||||| |||||||| || || || ||
Sbjct 3703 CTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAAA 3644
Query 56307 GGGGCCAATTCCAACGTCGGCGATGCCGAACGCGATCGCAACACGTACACGATTCTGTTA 56366
|| || || | || |||| | ||| ||| | | || | | || |
Sbjct 3643 GGTGCTAACCCTGACCTCGGTAGCCCAGAA---GATGGTGATTGTTATGTAAGTTTGATG 3587
Query 56367 CGAGATTTACGCGAAGCGCTAGACCGACTAAGC-CTC-GAAACGAATCG---AACATACG 56421
||| ||||| || ||| || | ||| ||| | | |||| | | |||||
Sbjct 3586 AAAGAATTACGTGAGATGCTCGA-----TGAGCTCTCTGCTAAGAATGGTAAGAAATACG 3532
Query 56422 AGCTAACCAGCGCCATTAGCGCCGGCGATGACAAAATCACGGTCGTCGACTACACAGCCG 56481
| |||| || |||||||| || || |||||| || || ||||| |
Sbjct 3531 AATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTTGTTGACTATGGTAAGG 3472
Query 56482 CTCAAAAATATTTAGATTATAtttttttGATGACATACGATTTTAAAGGCGCTTGGTCGA 56541
||||||| ||| | ||| ||||||| ||||||| ||||| || || || || ||||| |
Sbjct 3471 CTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTCAA 3412
Query 56542 ATAGCGATCTGGGCTATCAGACGACTTTGTACGCGCCTGCGTTTAATCCTAAAGAACACT 56601
|| ||| || |||| ||| | |||||||||||||||| ||||| || ||| |
Sbjct 3411 ATGATACTCTTGGACATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAACTT 3352
Query 56602 ATACGACCGATTTTGCGGT-TCGTGCTCTGCTTAAACAAAAAGTCGAGAATAAAAAGATT 56660
| || | || |||| || | || |||| || ||| | ||| ||||||
Sbjct 3351 ACACATCTGACTTTGGAGTAAAATACT-TGCTGGCGCAGGGAGTGAATCCTAAGAAGATT 3293
Query 56661 GTAGTCGGCGTAGCTATGTACGGTCGCGGGTGGACCGGCGTCGGTGATTTCGTCGACAAA 56720
||||| || || |||||||| ||||| || ||||| ||||| ||||| || |||
Sbjct 3292 GTAGTAGGTGTTGCTATGTATGGTCGTGGCTGGACTGGCGTTCATGATTACGAAGAC--- 3236
Query 56721 AACAATCCATTTTCCGGCACGGCCAAGGGACCTGTCAAAGGTACCTGGGAAGACGGAGTC 56780
|||| ||| || | |||| || | |||||||||||||| || ||| ||||||||||
Sbjct 3235 AACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGGAGTG 3176
Query 56781 GTTGATTTTAGAGAAATT 56798
||||| | || || |||
Sbjct 3175 GTTGACTACAGGGAGATT 3158
>seq28654
Length=3315
Score = 111 bits (122), Expect = 1e-19
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| |||||| | ||||||||| | ||||| | ||||| || ||
Sbjct 2158 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 2099
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | || ||| || || |||||||||||||| ||||| ||||||
Sbjct 2098 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 2039
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTATA 24168
|| | || |||| | ||||||||| | |||||| | | | || ||| || || |
Sbjct 2038 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTC--TGACTACA 1981
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||| |||||||||||||| | || ||||| | | || ||||| ||
Sbjct 1980 ACATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGG 1932
Score = 104 bits (114), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
|||||| | ||||| || || | || |||||| | || || | || || ||| |
Sbjct 2387 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTC 2328
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|||||| ||||| | || || |||||| |||||||| || || || || |||||
Sbjct 2327 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 2268
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATA 24168
|||||| || |||| | || || ||||| ||||||| | | || | | | |||||||
Sbjct 2267 ACAGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCG-TACATTATCTGATTATA 2209
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202
| |||||||| |||||||| | |||||||| ||
Sbjct 2208 ATATTCAAAAGGAATCTACCCTACATTTAGTATT 2175
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||||||||| | ||||| |||||| | || || ||| | ||||| | ||||| || |
Sbjct 2618 CAAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACC 2559
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
||| || || || | || ||| || ||| ||||| |||||||| ||||| ||
Sbjct 2558 TTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGA 2499
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
|||||| | |||||| || || |||||| | ||||| | | | | || ||
Sbjct 2498 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTA 2439
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202
||| ||||||||||||||||| |||| || || ||
Sbjct 2438 TAATATTCAAAAAGAATCTACTCTTCACTTGGTATT 2403
>seq27511
Length=800
Score = 104 bits (114), Expect = 2e-17
Identities = 153/213 (72%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
||||||| | |||||||| ||| | ||||| ||| | || || | ||||| || ||
Sbjct 216 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACTATCACTTTGGAAGTGGAAGCTTC 275
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|| || || || | || || ||||||| |||||||||||||| ||||| || ||
Sbjct 276 TGATACAATAGAAAATGTTAAGGCAAAGATTCAAGACAAAGAAGGCATTCCTCCTGACCA 335
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGA-AACGTCAGCGATTAT 24167
|||||| || |||| | || || || || |||||| ||| | | |||| ||||||
Sbjct 336 ACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACATTGTCA--GATTAT 393
Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTG 24200
|| ||||| || |||||||| | || || |||
Sbjct 394 AATATTCAGAAGGAATCTACTTTGCACTTGGTG 426
>seq27512
Length=242
Score = 98.7 bits (108), Expect = 9e-16
Identities = 162/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
||||||| | |||||||| ||| | ||||| || | || || | ||||| ||| ||
Sbjct 228 AATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 169
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
||||| ||||| | || || ||| ||| || || |||||||| ||||| || ||
Sbjct 168 TGACACAATCGAAAATGTTAAGGCAAAAATTCAAGATAAGGAAGGCATTCCTCCAGACCA 109
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG-ACAGAAACG-TCAGCGATTAT 24167
||| || || |||| | || ||||| || || |||| || | || |||| | ||
Sbjct 108 ACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAGGATGGACGTACACTATCAG--ACTAC 51
Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||| ||||||||||| | |||||||| | | ||||||| ||
Sbjct 50 AATATTCAGAAAGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 1
>seq13366
Length=6323
Score = 96.9 bits (106), Expect = 3e-15
Identities = 335/515 (65%), Gaps = 11/515 (2%)
Strand=Plus/Plus
Query 132197 AGATGTTGATTTACTATTTGATATTCACCCGATAAGACTCTTCGTACGTACAAATTACTA 132256
||||| || || |||| || |||| || ||||||||||||| | ||| | |||
Sbjct 844 AGATGATGGTTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGAT 903
Query 132257 GTAAACGGCTCGAACGATTCGTTGTTTCCCAATATTTGAGCTGTCGTTGCCGTCGGCATG 132316
||||| || || || ||||| |||| || | ||||| || || | || ||||||||
Sbjct 904 GTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATA 963
Query 132317 TAGGCAATCAATAATGAATTGCGCAGCCCGTGTATGGCCATTTGCCGTTTAAGCTCGTCC 132376
|| ||||||| |||||||||| || ||| | || || | |||||| | ||
Sbjct 964 GGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCC 1023
Query 132377 CAGTTCCACAGATCATTCGATTGAGAGATATTCCACAAATCAAACTGTAAATGACCGCTA 132436
|||| ||| || || | | ||| | | ||||| |||| |||| | |||
Sbjct 1024 CAGTCCCAAAGGTCTGTAG---GAGTTTTGTCCCACATATCATACTGGAGGATACCTTGG 1080
Query 132437 CTTGCAGGAGATCCGTTATAAGAATCGTATGCTCCGTGTAATTTGGCAAGTTCTATGCTC 132496
||||| ||| || | ||| | |||||| || | | || || | ||| ||
Sbjct 1081 CTTGCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACT- 1139
Query 132497 TGACTC-AGGGCACCATAATAAATAGTCTCTGAGATTTTTCTATTCAATTCCCTTGCTTG 132555
| || | |||||||||||||| || || | |||| | ||| | ||||||
Sbjct 1140 AGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTT 1199
Query 132556 TTGACTGTCGTAGGGCAAATT-TAA--AATAGCGAACGCATCGGCAAGTCCCTGAATGCC 132612
| ||| ||||| | | ||| | | || | | |||||||| || | ||||||| ||
Sbjct 1200 CTCACTTTCGTAAG--ATATTCTCATCAACA-CAAACGCATCTGCCATGCCCTGAACACC 1256
Query 132613 GATACCGATGGGTCTATGTTTAAAATTCGATACTTGTGCGCTAGTCAGCGGATAAAAGTT 132672
||||| || ||||||||| | | ||| || || ||| || | |||||||| ||
Sbjct 1257 AATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCCTCAGGGACAGGATAAAAATT 1316
Query 132673 TTTGTCTATTATTTTATTGAGATTGTTAGTGACAA 132707
|| || | ||| || | ||| | ||| ||||
Sbjct 1317 AACATCAATAACTTTGTTTAAATTTTGAGTTACAA 1351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428484128027865
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