Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq10526 302 4e-77 seq28654 111 1e-19 seq27511 104 2e-17 seq27512 98.7 9e-16 seq13366 96.9 3e-15 >seq10526 Length=5062 Score = 302 bits (334), Expect = 4e-77 Identities = 771/1158 (67%), Gaps = 33/1158 (3%) Strand=Plus/Minus Query 55653 AAAGGCGGTCGATATATAATGACCGTAAAGCTATGCAACTCGGACGGATGCACTTCGAGT 55712 ||||| || |||| |||||| || |||| ||||| ||||| |||| ||| ||| Sbjct 4294 AAAGGTGGAAGATACCAAATGACAGTGGAGCTTTGCAATGAAGACGGCTGCAGTTCAAGT 4235 Query 55713 CAAGCGGTCGAAGTTGTAATCGCAGATACGGACGGTTCTCATCTTGCTCCGCTCTATTAC 55772 | | |||| |||| | || ||||| || || |||| | |||| || | || Sbjct 4234 GATCCCACCGAAATTGTCGTGGCCGATACCGATGGAAGTCATTTACCTCCTCTGGAATAT 4175 Query 55773 GAATATCAGGAATTAAATCAACCTTTCGAAACGCGAGTCGTGGATAAAATCGTTGCCGCA 55832 || ||| |||| | || ||| || | || |||| ||| | || | || Sbjct 4174 ACATTGGGAGAAAAAAATAAGCCGTTC-AAGCAAACATC-TGGA-AAAGTTGTGGGTGCC 4118 Query 55833 TATTTTGTCGAGTGGGGTGTTTATCATAGAAACTTTCCTGTCACTCGAGTTCCCACTCCT 55892 || || || || |||||||| |||| ||| || || || || ||| | || | ||| Sbjct 4117 TACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTATACCT 4058 Query 55893 AATCTGTCACACATTCTCTACGGATTCATACCGATATGCGGCGGCGACGGCATTAACGAC 55952 ||||| | || | |||||||| || || || || |||||||| ||||||||||| || Sbjct 4057 AATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATTAATGAT 3998 Query 55953 AGTCTCAAGACGATAACCGGTAGTTTTGAAGCGCTTCAGCGATCGTGTTCGGGTCGAGAC 56012 ||| | || ||| || ||||| |||| || |||||||| ||| || || || Sbjct 3997 AGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGATCCTGTAGCGGCCGTGAG 3938 Query 56013 GACTTCAAAGTGTCGATTCATGACCCGTGGGCTGCGGTCCAAAAGCCCCAAAAACAAGTG 56072 ||||||||||| || || || || || ||||| || | ||||| || |||||| | || Sbjct 3937 GACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTG 3878 Query 56073 ACCGCATGGAACGAACCATACAAAGGCAACTTTGGACAATTGATGGCAGCTAAACTGGCG 56132 | |||||||||| || ||||||||||||||||| ||||| ||| || |||| || Sbjct 3877 TCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAAGC- 3819 Query 56133 AATCCCCATG--TTAAAG-TGCTGCCTTCGATCGGTGGCTGGACTTTATCCGATCC---G 56186 | || || || ||| | || || || || ||||| ||||| | ||||||| Sbjct 3818 --CCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCCGATCCTTTC 3761 Query 56187 TTCTTTTACTTTCACGATGCGGTCAAACGCAAAATTTTTGTCGATTCTGTCGTCGAGTTT 56246 ||||||| || || | | || | | | ||||| | || || |||||| Sbjct 3760 TTCTTTTTAGTTGACAAATC---TAAGAGAACACGATTTGTGCAGTCAGTAAAGGAGTTT 3704 Query 56247 TTACAGACCTGGAAATTTTTCGATGGTGTCGACATCGACTGGGAGTTTCCCGGCGGAAAG 56306 | | || |||||||| ||||||||||| || ||||| |||||||| || || || || Sbjct 3703 CTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAAA 3644 Query 56307 GGGGCCAATTCCAACGTCGGCGATGCCGAACGCGATCGCAACACGTACACGATTCTGTTA 56366 || || || | || |||| | ||| ||| | | || | | || | Sbjct 3643 GGTGCTAACCCTGACCTCGGTAGCCCAGAA---GATGGTGATTGTTATGTAAGTTTGATG 3587 Query 56367 CGAGATTTACGCGAAGCGCTAGACCGACTAAGC-CTC-GAAACGAATCG---AACATACG 56421 ||| ||||| || ||| || | ||| ||| | | |||| | | ||||| Sbjct 3586 AAAGAATTACGTGAGATGCTCGA-----TGAGCTCTCTGCTAAGAATGGTAAGAAATACG 3532 Query 56422 AGCTAACCAGCGCCATTAGCGCCGGCGATGACAAAATCACGGTCGTCGACTACACAGCCG 56481 | |||| || |||||||| || || |||||| || || ||||| | Sbjct 3531 AATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTTGTTGACTATGGTAAGG 3472 Query 56482 CTCAAAAATATTTAGATTATAtttttttGATGACATACGATTTTAAAGGCGCTTGGTCGA 56541 ||||||| ||| | ||| ||||||| ||||||| ||||| || || || || ||||| | Sbjct 3471 CTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTCAA 3412 Query 56542 ATAGCGATCTGGGCTATCAGACGACTTTGTACGCGCCTGCGTTTAATCCTAAAGAACACT 56601 || ||| || |||| ||| | |||||||||||||||| ||||| || ||| | Sbjct 3411 ATGATACTCTTGGACATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAACTT 3352 Query 56602 ATACGACCGATTTTGCGGT-TCGTGCTCTGCTTAAACAAAAAGTCGAGAATAAAAAGATT 56660 | || | || |||| || | || |||| || ||| | ||| |||||| Sbjct 3351 ACACATCTGACTTTGGAGTAAAATACT-TGCTGGCGCAGGGAGTGAATCCTAAGAAGATT 3293 Query 56661 GTAGTCGGCGTAGCTATGTACGGTCGCGGGTGGACCGGCGTCGGTGATTTCGTCGACAAA 56720 ||||| || || |||||||| ||||| || ||||| ||||| ||||| || ||| Sbjct 3292 GTAGTAGGTGTTGCTATGTATGGTCGTGGCTGGACTGGCGTTCATGATTACGAAGAC--- 3236 Query 56721 AACAATCCATTTTCCGGCACGGCCAAGGGACCTGTCAAAGGTACCTGGGAAGACGGAGTC 56780 |||| ||| || | |||| || | |||||||||||||| || ||| |||||||||| Sbjct 3235 AACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGGAGTG 3176 Query 56781 GTTGATTTTAGAGAAATT 56798 ||||| | || || ||| Sbjct 3175 GTTGACTACAGGGAGATT 3158 >seq28654 Length=3315 Score = 111 bits (122), Expect = 1e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| |||||| | ||||||||| | ||||| | ||||| || || Sbjct 2158 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 2099 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || ||| || || |||||||||||||| ||||| |||||| Sbjct 2098 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 2039 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTATA 24168 || | || |||| | ||||||||| | |||||| | | | || ||| || || | Sbjct 2038 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTC--TGACTACA 1981 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||| |||||||||||||| | || ||||| | | || ||||| || Sbjct 1980 ACATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGG 1932 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || || | || |||||| | || || | || || ||| | Sbjct 2387 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTC 2328 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||| ||||| | || || |||||| |||||||| || || || || ||||| Sbjct 2327 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 2268 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATA 24168 |||||| || |||| | || || ||||| ||||||| | | || | | | ||||||| Sbjct 2267 ACAGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCG-TACATTATCTGATTATA 2209 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 | |||||||| |||||||| | |||||||| || Sbjct 2208 ATATTCAAAAGGAATCTACCCTACATTTAGTATT 2175 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||||||||| | ||||| |||||| | || || ||| | ||||| | ||||| || | Sbjct 2618 CAAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACC 2559 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||| || || || | || ||| || ||| ||||| |||||||| ||||| || Sbjct 2558 TTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGA 2499 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 |||||| | |||||| || || |||||| | ||||| | | | | || || Sbjct 2498 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTA 2439 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 ||| ||||||||||||||||| |||| || || || Sbjct 2438 TAATATTCAAAAAGAATCTACTCTTCACTTGGTATT 2403 >seq27511 Length=800 Score = 104 bits (114), Expect = 2e-17 Identities = 153/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | |||||||| ||| | ||||| ||| | || || | ||||| || || Sbjct 216 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACTATCACTTTGGAAGTGGAAGCTTC 275 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | || || ||||||| |||||||||||||| ||||| || || Sbjct 276 TGATACAATAGAAAATGTTAAGGCAAAGATTCAAGACAAAGAAGGCATTCCTCCTGACCA 335 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGA-AACGTCAGCGATTAT 24167 |||||| || |||| | || || || || |||||| ||| | | |||| |||||| Sbjct 336 ACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACATTGTCA--GATTAT 393 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || ||||| || |||||||| | || || ||| Sbjct 394 AATATTCAGAAGGAATCTACTTTGCACTTGGTG 426 >seq27512 Length=242 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | |||||||| ||| | ||||| || | || || | ||||| ||| || Sbjct 228 AATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 169 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| ||||| | || || ||| ||| || || |||||||| ||||| || || Sbjct 168 TGACACAATCGAAAATGTTAAGGCAAAAATTCAAGATAAGGAAGGCATTCCTCCAGACCA 109 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG-ACAGAAACG-TCAGCGATTAT 24167 ||| || || |||| | || ||||| || || |||| || | || |||| | || Sbjct 108 ACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAGGATGGACGTACACTATCAG--ACTAC 51 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| ||||||||||| | |||||||| | | ||||||| || Sbjct 50 AATATTCAGAAAGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 1 >seq13366 Length=6323 Score = 96.9 bits (106), Expect = 3e-15 Identities = 335/515 (65%), Gaps = 11/515 (2%) Strand=Plus/Plus Query 132197 AGATGTTGATTTACTATTTGATATTCACCCGATAAGACTCTTCGTACGTACAAATTACTA 132256 ||||| || || |||| || |||| || ||||||||||||| | ||| | ||| Sbjct 844 AGATGATGGTTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGAT 903 Query 132257 GTAAACGGCTCGAACGATTCGTTGTTTCCCAATATTTGAGCTGTCGTTGCCGTCGGCATG 132316 ||||| || || || ||||| |||| || | ||||| || || | || |||||||| Sbjct 904 GTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATA 963 Query 132317 TAGGCAATCAATAATGAATTGCGCAGCCCGTGTATGGCCATTTGCCGTTTAAGCTCGTCC 132376 || ||||||| |||||||||| || ||| | || || | |||||| | || Sbjct 964 GGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCC 1023 Query 132377 CAGTTCCACAGATCATTCGATTGAGAGATATTCCACAAATCAAACTGTAAATGACCGCTA 132436 |||| ||| || || | | ||| | | ||||| |||| |||| | ||| Sbjct 1024 CAGTCCCAAAGGTCTGTAG---GAGTTTTGTCCCACATATCATACTGGAGGATACCTTGG 1080 Query 132437 CTTGCAGGAGATCCGTTATAAGAATCGTATGCTCCGTGTAATTTGGCAAGTTCTATGCTC 132496 ||||| ||| || | ||| | |||||| || | | || || | ||| || Sbjct 1081 CTTGCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACT- 1139 Query 132497 TGACTC-AGGGCACCATAATAAATAGTCTCTGAGATTTTTCTATTCAATTCCCTTGCTTG 132555 | || | |||||||||||||| || || | |||| | ||| | |||||| Sbjct 1140 AGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTT 1199 Query 132556 TTGACTGTCGTAGGGCAAATT-TAA--AATAGCGAACGCATCGGCAAGTCCCTGAATGCC 132612 | ||| ||||| | | ||| | | || | | |||||||| || | ||||||| || Sbjct 1200 CTCACTTTCGTAAG--ATATTCTCATCAACA-CAAACGCATCTGCCATGCCCTGAACACC 1256 Query 132613 GATACCGATGGGTCTATGTTTAAAATTCGATACTTGTGCGCTAGTCAGCGGATAAAAGTT 132672 ||||| || ||||||||| | | ||| || || ||| || | |||||||| || Sbjct 1257 AATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCCTCAGGGACAGGATAAAAATT 1316 Query 132673 TTTGTCTATTATTTTATTGAGATTGTTAGTGACAA 132707 || || | ||| || | ||| | ||| |||| Sbjct 1317 AACATCAATAACTTTGTTTAAATTTTGAGTTACAA 1351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428484128027865