Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq223285 161 3e-35 >seq223285 Length=663 Score = 161 bits (178), Expect = 3e-35 Identities = 219/301 (73%), Gaps = 6/301 (2%) Strand=Plus/Plus Query 39222 CGGCGACCTTCATCGCGCGCATCGGCTCCGGATTCAGCAGGCCGCCGCCGACGCGCTTCG 39281 || ||| || |||||| ||||| || || ||| ||| ||| |||||||| ||||||| Sbjct 350 CGCCGATCTGCATCGCCTTCATCGCGTCAGGGTTCTGCACGCCCCCGCCGACCCGCTTCG 409 Query 39282 TCGTGTAGAACAGTACGTACGGCTTCGCCGTGTACGGATCGCGCAGCA--CGCGAACCCC 39339 | |||||||| ||| ||||||| ||||||||||||||||||| || || | Sbjct 410 TGGTGTAGAAGCTGACGAACGGCTTGTTGGTGTACGGATCGCGCAGCATCATCGTCCCGC 469 Query 39340 GATGCGGTCGATGATCAGATACGTCTGCTGGAAGTCGCCGAAGAGAATCGGCGTCGAGTT 39399 || ||||||||||| || || ||| ||| | ||||||||| || | |||| | Sbjct 470 GA--CGGTCGATGATGAGGTAGGTCCGCTCCATGTCGCCGAACAGCA-AGGCGATGTTGC 526 Query 39400 CGCCGCC-ACATCCGGCATGTCCGGCACCTCGGTAACCGGATAGCCCGCCAGCGTCGCCG 39458 | |||| || ||||||||||||| ||| | | || || || ||| || | | Sbjct 527 CAGCGCCAACGGTGGGCATGTCCGGCATGTCGATCAGCGAGTAACCGCCCAAGGTGGAGG 586 Query 39459 GCTGCCCCGCTACGTACGACGGTTGCCAGAGATAGTTCCCTTGGCCGTCCTTCAGCTTCC 39518 |||| ||||| ||||| | ||| ||||| || ||||| || ||||||||||||||||| | Sbjct 587 GCTGGCCCGCGACGTAGGTCGGCTGCCACAGGTAGTTGCCCTGGCCGTCCTTCAGCTTGC 646 Query 39519 G 39519 | Sbjct 647 G 647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142945704376028