Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq10526 214 2e-50 seq15523 145 6e-30 seq28654 109 5e-19 seq41046 95.1 1e-14 seq133356 87.8 2e-12 >seq10526 Length=5062 Score = 214 bits (236), Expect = 2e-50 Identities = 620/936 (66%), Gaps = 44/936 (5%) Strand=Plus/Minus Query 32039 TGCGATGATGACGGCTG---TTCC-GTGAGCGAACCGGTAACTGTCAAAGTCGCCGACAC 32094 ||| |||| |||||||| ||| |||| | |||| || |||| || ||||| || Sbjct 4261 TGCAATGAAGACGGCTGCAGTTCAAGTGATCCCACCGA-AATTGTC---GTGGCCGATAC 4206 Query 32095 GGACGGCGGACATTTGCTTCCGATGGAATA--CGTTTGGCAAGAAAACAACAAGCCCGGC 32152 || || | ||||| | ||| ||||||| | || || |||||| || ||||| | Sbjct 4205 CGATGGAAGTCATTTACCTCCTCTGGAATATACATTGGG--AGAAAAAAATAAGCCGTTC 4148 Query 32153 CGGCGCGCAA----ACAAGACCGTCGCTGCGTATTTTGTAGAATGGGGCGTGTACGGGCG 32208 || || | ||| || | ||| || || ||||||||||| || || | Sbjct 4147 AAGCAAACATCTGGAAAAGTT-GTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAG 4089 Query 32209 CAATTTCCCAATAGACAAAGTGCCGTTGCCCAATTTGTCGCATCTGTTGTACGGATTTAT 32268 || ||||| | || | || | || ||| | | ||| || | ||||| ||||| Sbjct 4088 GAAATTCCCCGTGGATCGTATACCTATACCTAATCTTACTCATTTGCTCTACGGCTTTAT 4029 Query 32269 TCCTATTTGCGGCGGCGACGGACTAAACGATGCCCTCAAAACGATACCGGGCAGTTTTGA 32328 ||| ||||||||||| ||||| | || ||| | ||| ||| |||||||| | Sbjct 4028 TCCAATTTGCGGCGGTGACGGCATTAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCA 3969 Query 32329 GGCGCTGCAACGTTCGTGCAAAGGCCGCGCAGACTTTAAGGTTGCCATTCACGACCCTTG 32388 || || || || || || | ||||| | ||||| || || | || ||||| || || Sbjct 3968 AGCACTACAGCGATCCTGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATG 3909 Query 32389 GGCCGCAATACAAAAACCGCAGAAGGGCGTGTCTGCGTGGAACGAACCCTACAAAGGCAA 32448 ||| ||| |||||||||| || || || ||||| | |||||||| |||||||||||||| Sbjct 3908 GGCAGCATTACAAAAACCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAA 3849 Query 32449 CTTTGGCCAATTGATGGCGGCCAAGTTGGCAAACCCTCACATAAAAATTTTACCATCTAT 32508 |||||||||||| ||| | || || |||| | | || ||| | || ||||| Sbjct 3848 CTTTGGCCAATTAATGTCACTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCTAT 3789 Query 32509 TGGCGGGTGGACGTTGTCGGATCC---CTTTTATTTTATGCACGACGCGGAAAAACGGCA 32565 ||| ||||||||| | | ||||| ||| | ||| | || | | || | || Sbjct 3788 TGGTGGGTGGACGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATC--TAAGAGAACA 3731 Query 32566 CGTGTTTGTCGATTCCGTCAAAGAGTTTTTACAGGTTTGGAAATTCTTTGACGGAGTGGA 32625 || ||||| | || || || |||||| | | ||||||||||| || || || || Sbjct 3730 CG-ATTTGTGCAGTCAGTAAAGGAGTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGA 3672 Query 32626 CATTGATTGGGAGTTCCCGGGCGGCAAAGGTGCCAACCCGGCGCTCGGTAACGGGGAGCG 32685 || |||||||||||||| || ||||||||||| ||||| | ||||||| | || Sbjct 3671 TATCGATTGGGAGTTCCCTGGTGGCAAAGGTGCTAACCCTGACCTCGGTAGCCCAGA--- 3615 Query 32686 CGACGCGCACACGTACATTATTTTGTTACAAGAATTGCGTTCTATGCTGGACGACCT-TC 32744 || | | || | | |||| | ||||||| ||| ||||| || || || || Sbjct 3614 AGATGGTGATTGTTATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCTCTC 3555 Query 32745 AATTGC--AAACGGGCAAAACGTACGAGTTGACTAGCGCAATTAGTGCCGGCCACGACAA 32802 ||| | | || || | ||||| || ||| || ||||| || || || || Sbjct 3554 ---TGCTAAGAATGGTAAGAAATACGAATTAACTTCTGCTATTAGCGCTGGATGGGATAA 3498 Query 32803 AATTGCTGTGGTGCAATATG--AAGCCGCGCAAAAGTACCTCGATAAAATATTTCTCATG 32860 ||| || || | |||| ||| || ||||| || | ||| | || || | ||| Sbjct 3497 AATCCAAGTTGTTGACTATGGTAAG--GCTCAAAATTATATGGATCATATTTTCTTGATG 3440 Query 32861 AGTTACGACTTTAAAGGGGCATGGTCTAACACCGAT----TTGGGCTATCAGACCACTTT 32916 ||||||||||| || || || ||||| || ||| |||| | |||| || | || Sbjct 3439 AGTTACGACTTCAAGGGAGCCTGGTCAAA---TGATACTCTTGGAC-ATCAAACGCCATT 3384 Query 32917 GTACGCTCCAAGTTGGAATCCCGATGAATTGTACAC 32952 |||||| || ||||||||| | ||| ||||| Sbjct 3383 GTACGCGCCTGCGTGGAATCCCAAGGAAACTTACAC 3348 >seq15523 Length=5906 Score = 145 bits (160), Expect = 6e-30 Identities = 179/242 (74%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 109259 TGCGCA-CTTTTGCAGAATGGCCTCGTGGTTTGAAACAGCAACCCGATAAACTAGCCGAG 109317 |||||| ||| || || |||||||| || |||| ||| | || || |||| ||||| Sbjct 5838 TGCGCAGCTTCAGC-GACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCCGAA 5780 Query 109318 GCCGGGTTTTATTACACGGGCCAGGGCGATAAAACCAAATGTTTTTATTGTGACGGCGGT 109377 || || || | ||||| |||||||| || ||||| || || || || ||||||||||| Sbjct 5779 GCGGGATTCTTCTACACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGA 5720 Query 109378 TTGAAAGACTGGGAGGCGGACGATGAGCCGTGGAAACTGCACGCGCGTTGGTTTGACCGT 109437 | || ||||||||| ||||| | ||||||| | | |||||| || ||||| ||||| Sbjct 5719 CTCAAGGACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCACGCTGGTTCGACCGG 5660 Query 109438 TGCCCTTACGTGTTGCTTGTTAAGGGTCGAGATTATGTGCAAAAAATTGTAACGGAATCG 109497 ||| | |||||| ||| || || || ||||| || || || || | | |||||| || Sbjct 5659 TGCGCCTACGTGCAGCTGGTCAAAGGCCGAGAGTACGTCCAGAAGGTGATCACGGAAGCG 5600 Query 109498 TG 109499 || Sbjct 5599 TG 5598 >seq28654 Length=3315 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||| ||||| ||||| |||||||| ||||| | ||| || | Sbjct 2158 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 2099 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || ||| ||||| || ||||||||| | || ||||| Sbjct 2098 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 2039 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| ||||||||| ||||||||||||| || || | || || ||| Sbjct 2038 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACAAC 1979 Query 115466 ATTCAAAAAGAGTCTACT 115483 || |||||||| |||||| Sbjct 1978 ATCCAAAAAGAATCTACT 1961 Score = 95.1 bits (104), Expect = 1e-14 Identities = 170/247 (69%), Gaps = 1/247 (0%) Strand=Plus/Minus Query 115269 TTTATAAGAGAT-TAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACC 115327 ||| | | |||| | |||||||| || ||||| ||||| || ||||| ||||||||||| Sbjct 2632 TTTGTTACAGATATCAAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACT 2573 Query 115328 GTCGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAA 115387 | ||| || | ||| ||| ||| | | |||||| |||||| || || ||| Sbjct 2572 TTGGAAGTTGAACCTTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAA 2513 Query 115388 GGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAA 115447 ||| | || ||||| ||| | | |||| || || || ||||| ||||| | Sbjct 2512 GGCATTCCTCCAGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGC 2453 Query 115448 ACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGA 115507 || | | || ||||| ||||||||||| |||||| | || |||| ||| | | || Sbjct 2452 ACTCTTTCTGACTATAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGT 2393 Query 115508 GGAGGAA 115514 || |||| Sbjct 2392 GGTGGAA 2386 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| |||||||| || || || || || || || || | || |||| ||| | Sbjct 1702 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAGGTGGAG-CCATC 1644 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| | | ||||| || ||| |||||||| || | ||| ||||| Sbjct 1643 TGACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCA 1584 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | ||||| | ||| ||||| || ||||||||| ||| || | || || || Sbjct 1583 ACAACGTCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAA 1524 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| |||||||||||||| | ||| | || || | ||||||| || Sbjct 1523 CATCCAAAAAGAGTCTACCCTTCATTTAGTACTGCGTCTGCGAGGTGG 1476 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || ||||| || || || || ||||||||||| || | || ||| | Sbjct 2387 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTC 2328 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||||| | | | | || || ||| || || ||||| || | ||| ||||| Sbjct 2327 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 2268 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || || ||||||| ||| || |||||| | ||||||| | || | | |||||||| Sbjct 2267 ACAGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAA 2208 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||||||| || ||||| ||||| | || ||| Sbjct 2207 TATTCAAAAGGAATCTACCCTACATTTAGTATTG 2174 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| ||||||||||| || || |||||||| || || | ||| ||| ||| Sbjct 1247 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAG-CCAT 1189 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | ||||| ||| | | || ||| || ||| ||||| ||||| | || |||| Sbjct 1188 CAGACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATC 1129 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | ||| | ||||| | || || |||||| | ||||||| | ||| || | || || | Sbjct 1128 AACAACGTCTTATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACCCTGTCTGACTACA 1069 Query 115464 ACATTCAAAAAGAGTCTAC 115482 | || || |||||||| || Sbjct 1068 ATATCCAGAAAGAGTCGAC 1050 >seq41046 Length=7774 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| ||||| || || ||||| |||||||||||| |||| |||| || Sbjct 7383 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTC 7324 Query 115345 CGACACTGTTGGACAAG-TAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 || ||| | | | | | ||||| ||||| ||||| ||||| | || || | Sbjct 7323 TGATACTATAGAAAATGTTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACC 7264 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 ||||| | | || | ||| || |||||| ||||||||| || || | || || | Sbjct 7263 AGCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACA 7204 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 |||||||||| || || || | ||| | ||| | || | || ||||| || Sbjct 7203 ACATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAA 7152 >seq133356 Length=434 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 109048 GGATTTTATTATTTGGGTCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAAATA 109107 || || |||||| |||| |||||||| ||||| |||||||||||||| ||||| ||||| Sbjct 221 GGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAATT 162 Query 109108 ATGCGTTGGCTTGAGGGTGACGACCCAGCGGTTGACCATAAAAGATTAGCGCCACAGTGT 109167 ||| ||| ||| ||| ||||| || || ||||| | | | ||||| ||||| Sbjct 161 ATGAAATGGGTTGCGGGCGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCTCAGTGC 102 Query 109168 CCGTTC 109173 || ||| Sbjct 101 CCTTTC 96 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423907634977960