Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq10526 187 2e-42 seq13366 163 3e-35 seq28654 125 7e-24 seq41046 111 1e-19 seq21024 86.0 6e-12 seq133356 84.2 2e-11 seq266287 82.4 7e-11 >seq10526 Length=5062 Score = 187 bits (206), Expect = 2e-42 Identities = 337/492 (68%), Gaps = 8/492 (2%) Strand=Plus/Minus Query 23643 GCCTACTTTGTCGAGTGGGGCGTATATCCCAGACAATTTCCCGTAGACAAAGTGCCCGTG 23702 |||||||| || || ||||| || ||||| || |||| ||||| || | || | Sbjct 4120 GCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTATA 4061 Query 23703 CCTAATTTGTCACATTTGCTCTACGGCTTCGTACCTATATGCGGCGGCGAGGGAATTAAC 23762 |||||| | | ||||||||||||||||| | || || |||||||| || || ||||| Sbjct 4060 CCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATTAAT 4001 Query 23763 GACGCTCTCAAAACCGTGCCGGGCAGTTTCGAGGCGCTGCAGCGTTCGTGCGCGGGCCGC 23822 || | | ||| | ||||||||| | || || ||||| || || ||||| Sbjct 4000 GATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGATCCTGTAGCGGCCGT 3941 Query 23823 GCCGACTTCAAGGTATCCATCCACGATCCGTGGGCAGCTCTTCAGAAGCCGCAGAAGGGA 23882 | |||||||| || || ||||||||||| |||||||| | || || || || || ||| Sbjct 3940 GAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGA 3881 Query 23883 GTGTCGGCGTGGAACGAGCCGTATCGTGGAAACTTTGGTCAGTTGATGGCAACGAAACTG 23942 |||| | ||||||||||| || || |||||||| || || ||| || |||| Sbjct 3880 TTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAA 3821 Query 23943 GCGTATCCGCACTTGAAAGTGCTACCTTCGATCGGTGGCTGGACGCTGTCTGATCCGTT- 24001 || || | ||||| | || || || || ||||| |||||||| | ||||| || Sbjct 3820 GCCCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCCGATCCTTTC 3761 Query 24002 ---TTATCACATGCACGAGCCCAGCGTACGCCGTGTGTTTATCGACTCTGTCGAAGAGTT 24058 || | | || | | || | || | ||| | | || || | ||||| Sbjct 3760 TTCTTTTTAGTTGACAAATCTAAGAGAACAC----GATTTGTGCAGTCAGTAAAGGAGTT 3705 Query 24059 TTTGTTAACGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTCCCCGGCGGCAA 24118 | | |||| ||||||||||| || || || || || |||||||||||||| || ||||| Sbjct 3704 TCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAA 3645 Query 24119 AGGGGCAAATCC 24130 ||| || || || Sbjct 3644 AGGTGCTAACCC 3633 >seq13366 Length=6323 Score = 163 bits (180), Expect = 3e-35 Identities = 448/685 (65%), Gaps = 10/685 (1%) Strand=Plus/Plus Query 145103 TTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTG 145162 || || || |||||||||||||| || | ||||| || ||||| || || | || || Sbjct 898 TTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTC 957 Query 145163 GGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGC 145222 ||||| || | ||||| |||||||||| || || || || | ||| || || Sbjct 958 GGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGG 1017 Query 145223 GTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCC 145282 | |||| ||||| || || || | ||||||||| || ||||| | || || Sbjct 1018 ACAGCCCAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCT 1077 Query 145283 TCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTT--GGCGAGCTCGC 145340 | ||| || || || |||||| | | ||||| ||| || |||| || | || | Sbjct 1078 TGGCTTGCTGGACTCCCTTGATATGTGCTGTA--TGCACCTTCTTTTTCAGCTAATTCAC 1135 Query 145341 AACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCG 145400 |||| || || | || || |||||||||| || ||||| ||||| || || | Sbjct 1136 AACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTG 1195 Query 145401 CTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTC 145460 ||| || || ||||| | || | || || ||||| ||||| || | ||||| | | Sbjct 1196 CTTTCTCACTTTCGTAAGATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACAC 1255 Query 145461 CCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGAT 145520 | | || || || | |||| |||| || | | ||| || |||||| || Sbjct 1256 CAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCCTCAGGGACAGGATAAAAAT 1315 Query 145521 TACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTT 145580 || || |||| ||| || || ||| | ||| | |||||| || | || |||| Sbjct 1316 TAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTT 1375 Query 145581 CAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAAT 145640 ||| | ||| | | ||||| | || | || | || || || || | | Sbjct 1376 TAAAATTAAATCTGTTATTTTCAACAAACA------TGTTAAGTGCTATGGAAGCAAGGT 1429 Query 145641 TACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTAC 145700 | || |||||| || || | ||||||| || | ||| | ||| | |||||||| Sbjct 1430 TGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTAC 1489 Query 145701 ATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760 |||| || || || ||||||| |||||||| || ||||| || || ||||| || | || Sbjct 1490 ATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACA 1549 Query 145761 TGTACGGTCCGCCAGTCTCCACCTG 145785 |||| ||| ||||||||||| || Sbjct 1550 TGTATGGTGTACCAGTCTCCACTTG 1574 >seq28654 Length=3315 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| |||| ||| | ||| ||||||||||| |||||||| || Sbjct 1704 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAG 1763 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | ||||| || || |||| | ||||||||| || || ||| Sbjct 1764 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 1823 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| |||||| || | | || | |||||| | || || | Sbjct 1824 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 1883 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| || || ||||| ||||| || ||||||||||| Sbjct 1884 TCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| |||||||| | ||| ||||| ||||| |||||||| || | Sbjct 1476 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGAC 1535 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || |||||||||||||| || |||| | ||| || || || || || Sbjct 1536 AGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 1595 Query 131128 ATTCCTTCTTTGTC 131141 || || ||||| || Sbjct 1596 ATACCCTCTTTATC 1609 >seq41046 Length=7774 Score = 111 bits (122), Expect = 1e-19 Identities = 162/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | || ||||| | ||| | || || ||||||||||||||||| || | Sbjct 7155 CCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAC 7214 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || ||||| || || || || |||| ||||| |||||||| || || Sbjct 7215 AATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGA 7274 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| || || |||||| || | | | || | |||||| | || ||| | Sbjct 7275 ATACCTTCCTTATCTTGGATTTTAGCTTTTAACATTTTCTATAGTATCAGAGGCCTCCAC 7334 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||||| ||||||||| || || || || |||||||| ||||| Sbjct 7335 CTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 7382 >seq21024 Length=8359 Score = 86.0 bits (94), Expect = 6e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 131112 CTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGT 131171 ||||||||| || || ||||| |||||||| ||| || ||| | | ||| | ||| Sbjct 1971 CTGCTGGTCTGGGGGAATTCCCTCTTTGTCTTGGATCTTGGCCTTTACATTCTCGATAGT 1912 Query 131172 ATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTG 131231 || | || ||||| || | ||| | ||| ||||| ||||| ||||| ||||||||||| Sbjct 1911 GTCCGAGGGCTCGACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTCACGAAAATCTG 1852 Query 131232 CATGA 131236 ||||| Sbjct 1851 CATGA 1847 >seq133356 Length=434 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/123 (76%), Gaps = 6/123 (5%) Strand=Plus/Minus Query 113786 GGCTTTTACTATTTGAATCGTGGCGATGAAGTGCGCTGCGCTTTCTGCAAAGTCGAGATA 113845 ||||| || ||| || || ||||||||||| |||||||| || || ||||| || || Sbjct 221 GGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAATT 162 Query 113846 ATGAGATGGAGACCCGGCGACGATCCTCTCGCC---GACCACAAACGTTGGGCGCCTCAC 113902 |||| |||| | ||||||||||| |||| |||||| | || ||||||||||| Sbjct 161 ATGAAATGGGTTGCGGGCGACGATCC---CGCCAAGGACCACCAGCGCTGGGCGCCTCAG 105 Query 113903 TGC 113905 ||| Sbjct 104 TGC 102 >seq266287 Length=596 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 || |||| ||| |||||||||||||| || || ||| || | ||| |||||| | || Sbjct 366 TTCACGATCTGGAACTCGCCGGCCAAGACGCGGCGCGTGTAGATGTTGGACGTGTACGGC 425 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||| || || || || ||| | || || |||||| ||||| Sbjct 426 TCAAAGCACTCGTTGAATCCAAGAATCTGGCTGGTGCTCGCTGTCGGCATGGGCGCCAGA 485 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | |||||||| | || | || | | || || ||||| |||| ||||| Sbjct 486 AGGAGCGAATTGCGGATACCTTTGGCCTGAACGCGCTCTTTCAGCGTCGCCCAGTCCCAG 545 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTG 145272 || | |||| ||||| |||||||||| ||||| Sbjct 546 AGGTCCGACGGCGTCACGCCCCACATGTCATACTG 580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470377965966720