Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq10526 199 3e-46
seq28654 120 2e-22
seq5960 84.2 2e-11
>seq10526
Length=5062
Score = 199 bits (220), Expect = 3e-46
Identities = 770/1194 (64%), Gaps = 33/1194 (3%)
Strand=Plus/Plus
Query 95829 ATATTCATGGCATTAAGCAGATCGCCATTGTCAGCGTCTATTTCCCAGGCAAACAAACCT 95888
|| ||||||||||| || || || ||||| |||||||| | |||||| ||||| | |||
Sbjct 2943 ATGTTCATGGCATTCAGTAGGTCACCATTATCAGCGTCCACTTCCCAAGCAAAGAGACCA 3002
Query 95889 CCTAACTTGTTTTGTTCCACATATCGACCTTTAGCTATAACAGAATCAACACTATCATAT 95948
|||| |||||| | | |||||| ||| || | |||||||| | || |||||||
Sbjct 3003 CCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACAGATCTAGCATTATCATAG 3062
Query 95949 GAAATTAAATCGCCT-TTGGTTTTATCAAAAACGTAGGCGGCTTTTGCTACGTTGTCA-A 96006
| | | ||| || ||| | | | |||| | |||| ||||| || || ||||| |
Sbjct 3063 GTTACAAGATCTCCAGTTGATGGTCTGAAAA-CATAGGGGGCTTGGGCGACATTGTCGTA 3121
Query 96007 ATTTAACAATATATTTGTTT-----ATTTCGTTTTTGATTTGGCGATAATCAACAACGCC 96061
|| ||| || || ||||| || || | | || ||||| || ||
Sbjct 3122 ATGGAACTCCCACTTGCCTTGAGCAATTTCATTCGCAATCTCCCTGTAGTCAACCACTCC 3181
Query 96062 ATCTTCCCAAGTGCCCGAAACGGGCCCGTTACTACTTCCCAAAAAATAGTTATCGTTTTC 96121
|||| |||||| || || || || || | || || | | || |||
Sbjct 3182 GTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAATGTTGTCTTC 3241
Query 96122 GTAATT-TGACACTCCAGTCCAGCCGCGACCGTACATGGCCACGCCCACAATAATTTTGC 96180
||||| ||| || ||||||||||| ||||| ||||| || || || || | ||| ||
Sbjct 3242 GTAATCATGA-ACGCCAGTCCAGCCACGACCATACATAGCAACACCTACTACAATCTTCT 3300
Query 96181 GCGGGTCCACGCCTTGATTTGTGAGCAA---TTTAACGGCATGGTCCGTGTTGTACAGCT 96237
|| | ||| || || | ||||| ||| || || ||| | |||| |
Sbjct 3301 TAGGATTCACTCCCTGC---GCCAGCAAGTATTTTACTCCAAAGTCAGATGTGTAAGTTT 3357
Query 96238 CGTTTGGGTTCCAACTCGGCGCGTACAGTGTAGTTTGGTATCCCAAATCAATGTTTGACC 96297
| || || ||||| |||||||||| || ||||| | ||| | | | |||||||
Sbjct 3358 CCTTGGGATTCCACGCAGGCGCGTACAATGGCGTTTGATGTCCAAGAGTATCATTTGACC 3417
Query 96298 ACGCGCCTTTAAAATCGTAGCTCATGAGAAATATTTTGTCGAGGAACTTTTGCGCAACGT 96357
| || || || || ||||| ||||| | || || | || | | ||||| ||
Sbjct 3418 AGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATTTTGAGCCTTAC 3477
Query 96358 CGTATTTTACTACAGCAATTTTGTCGTGGCCGGCACTGATTGCACTTGTCAACTCGTACG 96417
| || | || || ||||| || || || || || ||| || || |||||
Sbjct 3478 CATAGTCAACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGTTAATTCGTATT 3537
Query 96418 TTTTGCCCGTTT--GCAGTTGCAACTCGTCTAACATCACGCGCAATTCCTTTAATAGAAT 96475
| || || | | |||| | ||| || | |||| | || ||||| || | | | |
Sbjct 3538 TCTTACCATTCTTAGCAGAG--AGCTCATCGAGCATCTCACGTAATTCTTTCATCAAACT 3595
Query 96476 GTTGTACGTGTCAGCGTCGCGCTCTTTGTTGCCGAGCGTC-GGGTTGGCGCCTTTACCGC 96534
|| ||| | || ||| | | ||||| ||| ||||| || ||||| || |
Sbjct 3596 TACATAACAATCACCATCT---TCTGGGCTACCGAG-GTCAGGGTTAGCACCTTTGCCAC 3651
Query 96535 CCGGAAATTCCCAGTCGATGTCCACTCCGTCGAAAAATTTCCAAACCTGCAAAAATTCTC 96594
| || || ||||| ||||| || || || ||||| |||||||| | | ||| ||
Sbjct 3652 CAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAGAAACTCCT 3711
Query 96595 TGACGGAGTCTACAAACACGCGCCGTTTTTCCGCGTCGTGCATGTAATA----GAACGGG 96650
| || || | ||||| || | | | | | || || ||| | ||| ||
Sbjct 3712 TTACTGACTGCACAAAT---CGTGTTCTCTTAGATTTGT-CAACTAAAAAGAAGAAAGGA 3767
Query 96651 TCGGACAGTGTCCAGCCGCCGATAGACGGCAGAATTTTAAGGTGTGGATTAGCCAGTTTG 96710
|||| || ||||| || || ||||| || ||||| || | | || || ||||
Sbjct 3768 TCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGTTTT 3827
Query 96711 GCCGCCATCAACTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGACACGCCCTTT 96770
| ||| || || ||||||||||||||||||||||||||||| | ||||| || |||
Sbjct 3828 AGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTTT 3887
Query 96771 TGCGGTTTTTGTACTGCGGCCCAAGGGTCGTGAATAGCAACTTTAAAATCTGAACGGCCC 96830
|| |||||||||| ||| ||||| || ||||| || | ||||| || || ||||||
Sbjct 3888 TGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGCCG 3947
Query 96831 TGGCAAGAGCGTTGCAGCGCTTCAAAACTACCGGGTATGGTTTTAAGGGCATCGTTAAGG 96890
|| || || || || |||| ||||| || || ||| | ||| |||| |
Sbjct 3948 CTACAGGATCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACTATCATTAATG 4007
Query 96891 CCGTCGCCGCCACAAATGGGTATAAACCCGTACAACAAATGTGACAAGTTGGGCAGCGGC 96950
||||| ||||| ||||| || ||||| ||||| | |||||| | | || || | ||
Sbjct 4008 CCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAAGATTAGGTATAGGT 4067
Query 96951 ACTTTGTCCACCGGAAAGTTACGACCATACACGCCCCATTCCACAAAATACGCA 97004
| ||||| || || || | | ||| || |||||||| || || || |||
Sbjct 4068 ATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGCA 4121
>seq28654
Length=3315
Score = 120 bits (132), Expect = 2e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| || | |||||| | ||| || || ||||||||||| ||||||||||| |
Sbjct 1704 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAG 1763
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | || |||||||| || || ||| | ||||| ||||| || || ||
Sbjct 1764 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 1823
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| |||||||||||| || || ||| || || | | | ||| || ||| |||
Sbjct 1824 ATGCCCTCTTTGTCTTGGATTTTAGCT--TTTACATTTTCAATAGTATCAGAGGGTTCCA 1881
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| ||| ||||| ||||| || || ||||| ||||||||||||||
Sbjct 1882 CTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930
Score = 104 bits (114), Expect = 2e-17
Identities = 162/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || |||| || ||| | ||| || || || |||||||| || || || || |
Sbjct 2160 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGAT 2219
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | | || |||| |||||| || ||| ||||||||| |||||| || ||
Sbjct 2220 AATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGA 2279
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||||||||| || ||||| |||||| | | | ||||||| |||||
Sbjct 2280 ATACCCTCTTTGTCTTGGATCTTTGC--CTTCACATTTTCGATAGTGTCGGACGGCTCTA 2337
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|| | |||||||||||||| || || || || ||||| |||||||||
Sbjct 2338 CCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 2387
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
||| || || || | ||||| | ||||| || || || ||||| ||||| ||||| |
Sbjct 563 CCCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGA 622
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
|| || | | ||||| || ||||| || ||| | || || ||||||||||| ||
Sbjct 623 CAGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGG 682
Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885
| |||||| ||||| || || || ||| || | | | ||||||| ||||||
Sbjct 683 AATGCCCTCCTTGTCTTGGATCTTAGC--CTTAACATTTTCGATAGTGTCGGATGGCTCC 740
Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| |||||||| || || || || || || ||||| ||||||||
Sbjct 741 ACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 790
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|||||||| || | ||||||| || || || ||||| || || || |||||||| | |
Sbjct 1020 CCTCCTCGGAGACGGAGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGAC 1079
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | || |||| |||||| || || | ||||| || ||||| || |||
Sbjct 1080 AGGGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGA 1139
Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| || || || || ||| | ||| || || | | | ||||| |||||
Sbjct 1140 ATTCCTTCCTTATCTTGAATCTTAGCT--TTAACATTTTCAATGGTGTCTGATGGCTCAA 1197
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
||||| || || |||||||| || || ||||||||||| || ||||||
Sbjct 1198 CTTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 1247
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/214 (69%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
||||| | |||| || || || ||||| ||||||||||| | || || | ||
Sbjct 1947 AGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTACGACCATCT 2006
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842
|| ||||| ||||||||| ||||||| || ||||| ||| ||| | ||| ||||||||
Sbjct 2007 TCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCT 2066
Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
|| || ||| ||||| | | | ||||| | || ||| | || || |
Sbjct 2067 TGGATTTTAGCT--TTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTG 2124
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||||| || || ||||| ||||| || |||||
Sbjct 2125 TTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 2158
>seq5960
Length=5068
Score = 84.2 bits (92), Expect = 2e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 29344 GGCGGCGTGGGGCTGAATCTAACGGGCGGCAACCACCTCGTTTTGTTGGAGCCGCACTGG 29403
|||||||| |||||||| || |||| | |||||| | || |||| |||||||||
Sbjct 3603 GGCGGCGTAGGGCTGAACCTGTGCGGCGCGAGCCACCTGCTGCTGCTGGACCCGCACTGG 3544
Query 29404 AACCCGCAGGTGGAGTTGCAGGCGCAGGGCCGCATCCACCGTTTGGGCCAG 29454
||||||||| ||||| |||||| |||| |||| | |||| |||| |||
Sbjct 3543 AACCCGCAGCTGGAGGAGCAGGCACAGGACCGCGTGTACCGCGTGGGGCAG 3493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 403720038458170
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