Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq28654 154 1e-32
seq27512 145 7e-30
seq27511 143 2e-29
seq41046 132 4e-26
>seq28654
Length=3315
Score = 154 bits (170), Expect = 1e-32
Identities = 160/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| |||||| | || || ||| ||||||| | || || ||| ||||
Sbjct 2387 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTC 2328
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||||||||| ||||| ||| ||| |||||||| || ||||| || || ||
Sbjct 2327 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 2268
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| || |||||||||| || |||||| | ||||||| || || | ||||| ||
Sbjct 2267 ACAGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAA 2208
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGT 25207
||||||||| ||||| || |||||||||||
Sbjct 2207 TATTCAAAAGGAATCTACCCTACATTTAGT 2178
Score = 145 bits (160), Expect = 7e-30
Identities = 163/215 (76%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| || || ||||| || || |||| || | ||||| || | |||
Sbjct 1474 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 1415
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| |||||| | || |||| |||| || || || || || || || || |||
Sbjct 1414 GACACAATCGAG--AATGTCAAAGCTAAAATACAG-GATAAGGAGGGCATCCCCCCAGAC 1358
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||||| | |||||||| || || ||||| ||||||| ||||||| || ||||||
Sbjct 1357 CAACAGCGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTAC 1298
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||||| ||||| || || || || ||||||||
Sbjct 1297 AATATTCAGAAAGAGTCAACCCTGCACTTAGTGCT 1263
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || || | || || ||| | || || | ||||| || | |||
Sbjct 2158 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 2099
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || |||| |||||| ||||||||||| ||||| || || |||
Sbjct 2098 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 2039
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || |||||||||| ||||| ||||||||||||| ||| || || || |||||
Sbjct 2038 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACAAC 1979
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||||||||| || | || ||||| || | ||||||| ||
Sbjct 1978 ATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGG 1932
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||| | || || || ||||||| | || |||||| | ||
Sbjct 790 ATGCAGATCTTTGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCC 731
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||||||||| | ||| || ||| ||||| || || ||||| || ||||||
Sbjct 730 GACACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAA 671
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || ||||| || ||||| ||||| |||| |||||| || || || ||
Sbjct 670 CAGCGTCTCATCTTTGCTGGTAAACAGTTAGAGGATGGCCGCACTCTGTCGGACTATAAC 611
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||||||||| || | |||||||| ||
Sbjct 610 ATCCAAAAAGAATCTACTTTGCATTTAGTACT 579
Score = 116 bits (128), Expect = 3e-21
Identities = 155/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| ||||| | || || || | || || | || |||||| | |||
Sbjct 1702 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAGGTGGAGCCATCT 1643
Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | || || || | ||| || ||||| || ||||| || || ||
Sbjct 1642 GACACCATTGAAAATGTAAAGGCTAAGATTCA-AGATAAAGAGGGTATTCCCCCAGATCA 1584
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || |||| ||||| ||||| || ||||||||| |||||| || || |||||
Sbjct 1583 ACAACGTCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAA 1524
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| |||||||| || || || |||||||| ||
Sbjct 1523 CATCCAAAAAGAGTCTACCCTTCATTTAGTACT 1491
Score = 105 bits (116), Expect = 6e-18
Identities = 153/213 (72%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| || || | || |||||| |||| || | ||||| || | ||
Sbjct 2615 AATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCTTC 2556
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| ||||| || | || |||| |||| ||| ||||| ||||| ||||| || ||
Sbjct 2555 CGATACTATTGAA--AATGTAAAAGCCAAAATTCAA-GACAAGGAAGGCATTCCTCCAGA 2499
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || | ||||| || || || ||||| ||||| | |||||| | || ||
Sbjct 2498 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTA 2439
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207
||||||||||||||||| || || || || ||
Sbjct 2438 TAATATTCAAAAAGAATCTACTCTTCACTTGGT 2406
Score = 102 bits (112), Expect = 7e-17
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||||||||| || || | || || ||| | || || | ||||| ||| | ||
Sbjct 1247 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATC 1188
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || | || |||| || | ||| || || ||||| ||||| || ||
Sbjct 1187 AGACACCATTGA--AAATGTTAAAGCTAAGATTCA-AGATAAGGAAGGAATTCCTCCAGA 1131
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || |||| || || || |||||| | ||||||| ||||| || || ||
Sbjct 1130 TCAACAACGTCTTATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACCCTGTCTGACTA 1071
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||| || ||||| || || || || || || || | || |||||||
Sbjct 1070 CAATATCCAGAAAGAGTCGACCCTTCACTTGGTACTCCGTCTCCGAGGAGG 1020
Score = 100 bits (110), Expect = 2e-16
Identities = 162/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||||||||| |||| || ||| | |||||| | ||||| || | ||
Sbjct 1018 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 959
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||||| || | || |||| || ||| |||||||| || ||||| || ||
Sbjct 958 GACACTATTGA--AAATGTTAAAGC-TAAGATCCAAGACAAAGAGGGTATTCCCCCAGAT 902
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| || | ||||| || ||||| || | || |||| || ||| | || ||
Sbjct 901 CAACAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTAT 842
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||||| ||||| ||||| | || || || || | || |||||||
Sbjct 841 AATATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGG 792
>seq27512
Length=242
Score = 145 bits (160), Expect = 7e-30
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||||||||||||||| |||| || || | |||||| | ||||| ||| | ||
Sbjct 228 AATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 169
Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||| ||||| | ||| |||||| ||| || || ||||| ||||| || ||||
Sbjct 168 TGACACAATCGAAAATGTTAAGGCAAAAATTCAA-GATAAGGAAGGCATTCCTCCAGACC 110
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| || |||||||||| || || || | || |||| || || | || ||||
Sbjct 109 AACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAGGATGGACGTACACTATCAGACTACA 50
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||||| |||||||| || |||||||||| || | || ||||| ||
Sbjct 49 ATATTCAGAAAGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 1
>seq27511
Length=800
Score = 143 bits (158), Expect = 2e-29
Identities = 172/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||||||||| |||| || ||| | ||||| | |||||||| | ||
Sbjct 216 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACTATCACTTTGGAAGTGGAAGCTTC 275
Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||| || || || | || ||||| | ||| ||||||||||| ||||| |||||||
Sbjct 276 TGATACAATAGAAAATGTTAAGGCAAAGATTCA-AGACAAAGAAGGCATTCCTCCTGACC 334
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
||||| || |||||||||| || ||||| | ||||||| || || || ||||| |
Sbjct 335 AACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACATTGTCAGATTATA 394
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||||||| || ||||| || | || || ||||| | || || || ||||
Sbjct 395 ATATTCAGAAGGAATCTACTTTGCACTTGGTGCTGCGCCTTAGGGGTGGAA 445
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||||||||| |||| || || | ||||| | |||||||| | ||
Sbjct 444 AATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTC 503
Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||| || || || | || || |||| ||| || ||||| || ||||| || || |
Sbjct 504 TGATACAATTGAAAATGTTAAGGCGAAAATTCA-GGATAAAGAGGGTATTCCCCCAGATC 562
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || | |||||||||| || || || | ||||||| ||||| | || ||||
Sbjct 563 AGCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACA 622
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||||||| || ||||| || | || | || || |||| ||||| ||||
Sbjct 623 ATATTCAGAAGGAATCAACTTTGCACCTGGTACTGCGGCTGAGAGGTGGAA 673
>seq41046
Length=7774
Score = 132 bits (146), Expect = 4e-26
Identities = 176/242 (73%), Gaps = 7/242 (3%)
Strand=Plus/Minus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
||||||||||| || || ||||| | || |||||| |||| || |||| |||||| |
Sbjct 7385 ACAATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCC 7326
Query 25056 TCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111
||||| ||||| || || | |||| |||||| || || ||||| ||||||||
Sbjct 7325 TCTGATACTATAGAAAATGTTA--AAAGC-TAAAATCCAAGATAAGGAAGGTATTCCACC 7269
Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171
||||| || || | || ||||| || |||||| ||||||||| || || || ||
Sbjct 7268 AGACCAGCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGA 7209
Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231
||||| |||||||| |||||||| | ||| | ||||| | || | ||||| || ||
Sbjct 7208 CTACAACATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAACTA 7149
Query 25232 TT 25233
||
Sbjct 7148 TT 7147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 431864673416645
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |