Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq7533 159 4e-34
seq132478 131 2e-25
seq114119 129 7e-25
seq43185 129 7e-25
>seq7533
Length=2710
Score = 159 bits (176), Expect = 4e-34
Identities = 165/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414
||| | ||| ||||| || ||||| | ||| ||||| || ||||| ||||| ||||| ||
Sbjct 1032 ATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGC 973
Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474
|||||| || || ||||| || || ||||| || | || || ||||| ||||| | |||
Sbjct 972 AATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAAAAACGCTC 913
Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534
|| | || ||||| || |||||||| || || ||||| || || || | |||||| ||
Sbjct 912 CACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGAT 853
Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATC 93570
||||||||||||| |||||| | | ||||||||
Sbjct 852 AAAATGTTTCTCACAATCTTTTAATGTCTCCCAATC 817
Score = 156 bits (172), Expect = 5e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193
||||| ||||| || || || || | ||| |||||||| || | ||||||||||||||||
Sbjct 1839 TCATTACTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCA 1780
Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253
|| || || || |||||||| || || || |||||||| || | |||||||| ||||
Sbjct 1779 AAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAAT 1720
Query 93254 TTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313
| || | || |||| |||||| | ||| ||||| || || || ||||||| ||| |||
Sbjct 1719 GTAGCTGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATGGT 1660
Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATC 93342
|| ||||| || || || |||| | ||||
Sbjct 1659 AGAGTTTCAATTGCATTGAATAAGAAATC 1631
Score = 125 bits (138), Expect = 8e-24
Identities = 107/132 (81%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 93590 TCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCT 93649
|| |||||||| ||||||||||||||||||| |||||||| ||||| | |||||| |||
Sbjct 671 TCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGCCATATATCT 612
Query 93650 TGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGT 93709
||||||| ||||| ||||| |||||||| |||| || || | | | || || |||
Sbjct 611 GGATATTGGATTGGGAATATAACAAAACGTCTAGGATTTTCCCTCAACAGGGGTTCAAGT 552
Query 93710 TGTGGGTCAAAC 93721
||||||||||||
Sbjct 551 TGTGGGTCAAAC 540
>seq132478
Length=2458
Score = 131 bits (144), Expect = 2e-25
Identities = 80/84 (95%), Gaps = 2/84 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||
Sbjct 346 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATTGGGAGCG 405
Query 126324 TGGGTTCGAACCCCACACCTGACA 126347
||||||||||||||||||||||||
Sbjct 406 TGGGTTCGAACCCCACACCTGACA 429
>seq114119
Length=553
Score = 129 bits (142), Expect = 7e-25
Identities = 80/85 (94%), Gaps = 2/85 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 85 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGGGGGAGC 26
Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347
|||||||||||||||||||||||||
Sbjct 25 GTGGGTTCGAACCCCACACCTGACA 1
>seq43185
Length=17735
Score = 129 bits (142), Expect = 7e-25
Identities = 80/85 (94%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 5952 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGGGAGGGAGCG 6011
Query 126324 TGGGTTCGAACCCCACACCTGACAA 126348
|||||||||||||||||||||||||
Sbjct 6012 TGGGTTCGAACCCCACACCTGACAA 6036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 554932091736920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |