Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq35919 93.3 9e-14 seq31747 91.5 3e-13 seq9139 89.7 1e-12 seq160769 87.8 4e-12 seq105956 87.8 4e-12 seq42944 87.8 4e-12 seq30320 87.8 4e-12 seq6439 87.8 4e-12 >seq35919 Length=1689 Score = 93.3 bits (102), Expect = 9e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758 || || || || ||||| |||||||||||||| |||||| | ||||| || || | Sbjct 1332 GGCTCGCTCTCCGGTGGATGGAAGATGAAGCTCGCCCTCGCGCGCGCTATGCTTTTCAAG 1273 Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818 || || |||| || ||||| ||||| |||||||| | ||| |||||| ||| Sbjct 1272 GCTGACATCCTGCTCCTTGACGAGCCGACCAACCATCTCGACGTGCTCAACGTCCAGTGG 1213 Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878 || || |||||| ||||| ||| || | || |||| ||||| |||||| | Sbjct 1212 CTGATGGACTACCTTACCAGCTTGACGACCTGCACGTCGATCATCGTCTCCCACGACAGT 1153 Query 279879 GGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCAC 279914 |||||||| || |||||| | | |||| | ||| Sbjct 1152 GGCTTCCTTGACAAGGTGTGCACGGACATCCTCCAC 1117 >seq31747 Length=4812 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 74 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 15 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 14 CCCCACGTTGGGC 2 >seq9139 Length=6839 Score = 89.7 bits (98), Expect = 1e-12 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 142046 AACGCAT-GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGG 142104 ||| ||| ||| |||||||||| ||| ||||||||||||||||||||||||||| | || Sbjct 4481 AACACATCGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGG 4540 Query 142105 GTTCGACCCCCGCCAGAGA 142123 |||||| |||| |||| || Sbjct 4541 GTTCGATCCCCACCAGGGA 4559 >seq160769 Length=1648 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 1 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 60 Query 142113 CCCGCCAGAGA 142123 ||| |||| || Sbjct 61 CCCACCAGGGA 71 >seq105956 Length=1208 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 73 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 14 Query 142113 CCCGCCAGAGA 142123 ||| |||| || Sbjct 13 CCCACCAGGGA 3 >seq42944 Length=5196 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 1750 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 1809 Query 142113 CCCGCCAGAGA 142123 ||| |||| || Sbjct 1810 CCCACCAGGGA 1820 >seq30320 Length=5022 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 1728 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 1787 Query 142113 CCCGCCAGAGA 142123 ||| |||| || Sbjct 1788 CCCACCAGGGA 1798 >seq6439 Length=3438 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 2342 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 2283 Query 142113 CCCGCCAGAGA 142123 ||| |||| || Sbjct 2282 CCCACCAGGGA 2272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1024187849916803