Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq35919 93.3 9e-14
seq31747 91.5 3e-13
seq9139 89.7 1e-12
seq160769 87.8 4e-12
seq105956 87.8 4e-12
seq42944 87.8 4e-12
seq30320 87.8 4e-12
seq6439 87.8 4e-12
>seq35919
Length=1689
Score = 93.3 bits (102), Expect = 9e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758
|| || || || ||||| |||||||||||||| |||||| | ||||| || || |
Sbjct 1332 GGCTCGCTCTCCGGTGGATGGAAGATGAAGCTCGCCCTCGCGCGCGCTATGCTTTTCAAG 1273
Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818
|| || |||| || ||||| ||||| |||||||| | ||| |||||| |||
Sbjct 1272 GCTGACATCCTGCTCCTTGACGAGCCGACCAACCATCTCGACGTGCTCAACGTCCAGTGG 1213
Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878
|| || |||||| ||||| ||| || | || |||| ||||| |||||| |
Sbjct 1212 CTGATGGACTACCTTACCAGCTTGACGACCTGCACGTCGATCATCGTCTCCCACGACAGT 1153
Query 279879 GGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCAC 279914
|||||||| || |||||| | | |||| | |||
Sbjct 1152 GGCTTCCTTGACAAGGTGTGCACGGACATCCTCCAC 1117
>seq31747
Length=4812
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 74 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 15
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 14 CCCCACGTTGGGC 2
>seq9139
Length=6839
Score = 89.7 bits (98), Expect = 1e-12
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand=Plus/Plus
Query 142046 AACGCAT-GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGG 142104
||| ||| ||| |||||||||| ||| ||||||||||||||||||||||||||| | ||
Sbjct 4481 AACACATCGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGG 4540
Query 142105 GTTCGACCCCCGCCAGAGA 142123
|||||| |||| |||| ||
Sbjct 4541 GTTCGATCCCCACCAGGGA 4559
>seq160769
Length=1648
Score = 87.8 bits (96), Expect = 4e-12
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112
||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| |
Sbjct 1 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 60
Query 142113 CCCGCCAGAGA 142123
||| |||| ||
Sbjct 61 CCCACCAGGGA 71
>seq105956
Length=1208
Score = 87.8 bits (96), Expect = 4e-12
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112
||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| |
Sbjct 73 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 14
Query 142113 CCCGCCAGAGA 142123
||| |||| ||
Sbjct 13 CCCACCAGGGA 3
>seq42944
Length=5196
Score = 87.8 bits (96), Expect = 4e-12
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112
||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| |
Sbjct 1750 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 1809
Query 142113 CCCGCCAGAGA 142123
||| |||| ||
Sbjct 1810 CCCACCAGGGA 1820
>seq30320
Length=5022
Score = 87.8 bits (96), Expect = 4e-12
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112
||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| |
Sbjct 1728 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 1787
Query 142113 CCCGCCAGAGA 142123
||| |||| ||
Sbjct 1788 CCCACCAGGGA 1798
>seq6439
Length=3438
Score = 87.8 bits (96), Expect = 4e-12
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112
||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| |
Sbjct 2342 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 2283
Query 142113 CCCGCCAGAGA 142123
||| |||| ||
Sbjct 2282 CCCACCAGGGA 2272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1024187849916803
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |