Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq10526 233 1e-56 seq27511 113 3e-20 seq27512 104 2e-17 seq28654 96.9 2e-15 seq76306 82.4 5e-11 >seq10526 Length=5062 Score = 233 bits (258), Expect = 1e-56 Identities = 415/596 (70%), Gaps = 27/596 (5%) Strand=Plus/Plus Query 84237 GGGTTGGCTCCTTTGCCTCCCGGAAATTCCCAATCGATGTCTACACCGTCGAAAAATTTC 84296 ||||| || |||||||| || || || ||||||||||| || ||||| ||||| |||||| Sbjct 3633 GGGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTC 3692 Query 84297 CATACTTGTAAAAACTCCTTAACCGAATTTACAAAAACGT-TTCTTTTTTCAACATTGTG 84355 ||| | | | ||||||||| || || | ||||| ||| |||| || | ||| || Sbjct 3693 CATGTTAGAAGAAACTCCTTTACTGACTGCACAAAT-CGTGTTCTCTT----AGATT-TG 3746 Query 84356 CATGAAATAAAACG------GGTCCGACAA-CGTCCATCCTCCTATGGACGGAAGAATCT 84408 | || ||||| | || || ||| |||||| || || || || |||||||||| Sbjct 3747 --TCAACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCT 3804 Query 84409 ----TTAGGTGCGGGTTCGCCAATTTAGCTGCCATCAATTGTCCAAAATTGCCTTTATAC 84464 || | ||||| | | ||||| || ||| ||||| ||||| |||||||| || Sbjct 3805 TCAATTCAGGGCGGGCTTG---TTTTAG-TGACATTAATTGGCCAAAGTTGCCTTTGTAG 3860 Query 84465 GGTTCGTTCCAAGCGGACACGCCCTTTTGGGGCTTTTGTACGGCGGCCCACGGATCGTGG 84524 || |||||||| | |||| || ||||| || ||||||| || ||||| ||||||||| Sbjct 3861 GGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGG 3920 Query 84525 ATGGCAATTTTAAAATCCGCACGTCCCCTGCACGATCGTTGCAGAGATTCGAAACTACCG 84584 || | | ||| || ||| |||| || || || ||||| || || | || |||||| || Sbjct 3921 ATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGATCGCTGTAGTGCTTGGAAACTGCCT 3980 Query 84585 GGTATCACTTTGAGAGCATCGTTTATTCCATTACCGCCGCAAATGGGTATGAAACCGTAC 84644 ||| |||| | | ||| || || || | |||||||||||| || || || ||||| Sbjct 3981 TCGATCTCTTTTAAACTATCATTAATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAG 4040 Query 84645 AACAAGTGTGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAATTGCGCCCGTACACT 84704 | ||| || | | ||| || | || | || ||||| || || | || || Sbjct 4041 AGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACA 4100 Query 84705 CCCCATTCAACAAAATACGCAGCAACCGTTTTATCGTCTCTT---CTGCCCGGTTTGTTG 84761 |||||||| || || || ||| | || ||| | | || || ||| || || Sbjct 4101 CCCCATTCTACGAAGTAGGCACCCACAACTTTTCCAGATGTTTGCTTGAACGGCTTATTT 4160 Query 84762 TTTTCCCGCCATGTATATTCCAGCGGAGCCAAATGACCGCCGTCGGTGTCTGCCAC 84817 ||||| | | ||||||||||||| |||| ||||||| || ||||| || ||||| Sbjct 4161 TTTTCTCCCAATGTATATTCCAGAGGAGGTAAATGACTTCCATCGGTATCGGCCAC 4216 >seq27511 Length=800 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| ||| | || ||| | || |||||||| || || ||||| |||||| | Sbjct 216 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACTATCACTTTGGAAGTGGAAGCTTC 275 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || ||||| ||| ||| || ||||| || | ||| |||| Sbjct 276 TGATACAATAGAAAATGTTAAGGCAAAGATTCAAGACAAAGAAGGCATTCCTCCTGACCA 335 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 |||||| ||||| ||||| || ||||| || |||||| | || || | ||||| || Sbjct 336 ACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACATTGTCAGATTATAA 395 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGT 22042 ||||||||||||||||||| | || |||| Sbjct 396 TATTCAGAAGGAATCTACTTTGCACTTGGT 425 Score = 109 bits (120), Expect = 4e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| ||| | || ||| | || ||||| || || || ||||| |||||| | Sbjct 444 AATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTC 503 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || ||||| |||||| |||||||||||| | || | | || Sbjct 504 TGATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGTATTCCCCCAGATCA 563 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTA--AAAACTATGGCCGATTAC 22010 || |||||||| |||||||| || || || |||||| | | ||||| | || ||| Sbjct 564 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGACTAC 621 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 ||||||||||||||||| ||| | || ||||| | || | |||| ||| Sbjct 622 AATATTCAGAAGGAATCAACTTTGCACCTGGTACTGCGGCTGAGAGGTGGA 672 >seq27512 Length=242 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||||||| | || ||| | || ||||| || || || ||||| || || | Sbjct 228 AATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 169 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || ||||| ||||||| ||||| || || | ||| | |||| Sbjct 168 TGACACAATCGAAAATGTTAAGGCAAAAATTCAAGATAAGGAAGGCATTCCTCCAGACCA 109 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAA--AAACTATGGCCGATTAC 22010 ||| || ||||| |||||||| || || || || ||| | | ||||| | || ||| Sbjct 108 ACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAGGATGGACGTACACTAT--CAGACTAC 51 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||||||||| ||||||||| | ||| | ||| | ||| | |||| || Sbjct 50 AATATTCAGAAAGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 1 >seq28654 Length=3315 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||||||| | |||||| | || || ||||| || || ||||| || | | Sbjct 1247 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATC 1188 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| || | | || |||| || ||| ||||| || || | ||| | | || Sbjct 1187 AGACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 1128 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||| | |||||||| ||||| |||||||| |||||| || || | || ||||| Sbjct 1127 ACAACGTCTTATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACCCTGTCTGACTACAA 1068 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||| ||||| || || || ||||| ||||| | ||| | |||||||| Sbjct 1067 TATCCAGAAAGAGTCGACCCTTCACTTGGTACTCCGTCTCCGAGGAGG 1020 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | || ||| |||| ||||| || || || |||| ||| | | Sbjct 1702 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAGGTGGAGCCATCT 1643 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| || ||| |||||||||||| | || | | ||| Sbjct 1642 GACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAA 1583 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | ||||||||||||||||| || ||||||||| || || | || ||||| Sbjct 1582 CAACGTCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAAC 1523 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || || || ||||| |||||| | ||| | ||| | ||||| || Sbjct 1522 ATCCAAAAAGAGTCTACCCTTCATTTAGTACTGCGTCTGCGAGGTGG 1476 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | |||||||| || || || ||||||||| ||||| ||| | | Sbjct 1474 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 1415 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || ||||| ||||| ||||| | || | ||||| Sbjct 1414 GACACAATCGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 1355 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| | || || |||||||| || ||| | |||||| ||| || | ||||||||| Sbjct 1354 CAGCGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 1295 Query 22014 ATTCAGAAGGAATCTACTCTTCA 22036 |||||||| || || || || || Sbjct 1294 ATTCAGAAAGAGTCAACCCTGCA 1272 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| ||||||| |||| || || ||||||||| ||||| |||| || | Sbjct 1930 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCT 1871 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | || | || ||||| || |||||||| | ||||| | Sbjct 1870 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTG---AT 1814 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || ||| | |||||||||||||| || ||| | |||||| || | | || ||| Sbjct 1813 CAGCAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTCTCTGACTAC 1754 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || || ||||| ||||| |||||| | ||| | ||| | ||||| || Sbjct 1753 AACATCCAAAAGGAGTCTACCCTTCATCTAGTACTGCGTCTGCGAGGTGG 1704 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCG- 21891 |||||| || ||| |||| || | || || |||||||| || | || || |||| Sbjct 2387 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGA-GCCGT 2329 Query 21892 CAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACC 21951 | || || | | || | ||| ||| || || ||||||||| | || | | | Sbjct 2328 CCGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATC 2269 Query 21952 AACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACA 22011 ||||||| ||||| |||||||| |||||||| |||||| || | | ||||| | Sbjct 2268 AACAGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATA 2209 Query 22012 ATATTCAGAAGGAATCTACTCTTCATATGGTATTACG 22048 ||||||| ||||||||||| || ||| | ||||| || Sbjct 2208 ATATTCAAAAGGAATCTACCCTACATTTAGTATTGCG 2172 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||||||||| || ||| | |||||| | ||||| ||||||||||| ||||| ||| | Sbjct 2618 CAAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACC 2559 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | || || | | || | || |||||| || || || || | ||| | | Sbjct 2558 TTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGA 2499 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 ||||| | | || || ||||| || ||| | ||||| | ||| | | || || Sbjct 2498 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTA 2439 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 |||||||| || |||||||||||||| ||||||| ||| | || || ||| Sbjct 2438 TAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGGA 2387 >seq76306 Length=316 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | ||||| ||||| || |||||||| || ||||| |||||| | Sbjct 57 ATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCT 116 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | ||| ||| ||| || || || || | ||| | | ||| Sbjct 117 GATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 176 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || ||||| || || || || || ||||| |||||| || || | || || ||| Sbjct 177 CAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 236 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 || ||||||||||||||| | || | || || ||| || | || ||| Sbjct 237 ATCCAGAAGGAATCTACTTTGCACTTAGTTTTGCGTCTAAGGGGTGGA 284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356915430792382