Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq64317 84.2 5e-13 seq40014 84.2 5e-13 >seq64317 Length=4061 Score = 84.2 bits (92), Expect = 5e-13 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 3410 ACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCT 3469 |||| | ||||||||||| ||| ||||| |||||||||||||| ||| ||||||||| Sbjct 3254 ACGACGCGCTCTGCATCCTGCCGCTCAACGTCGTCAACGAGAAGATATACGTTTTCCTCT 3195 Query 3470 GGTTCTGGTTC 3480 ||||||||||| Sbjct 3194 GGTTCTGGTTC 3184 >seq40014 Length=5783 Score = 84.2 bits (92), Expect = 5e-13 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391 |||| ||| ||||| ||||| | | | || ||| || || |||||||||||||||| Sbjct 2889 ACCCTATGGCTCGAGTATTTCCTAAAGTTACAAAATGCACATTCCACAAATACGGTCCTT 2830 Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451 |||| || || | || | ||| || || || | || || ||| | || || |||| Sbjct 2829 CGGGAACCGTGCAGAAGTTCGACGGGCTGTGTGTACTACCATTGAATATTGTAAATGAGA 2770 Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTTC 3480 ||||||| | ||||| |||||||||||| Sbjct 2769 AGATCTATGTATTCCTGTGGTTCTGGTTC 2741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12442178170500