Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq266287 132 9e-26
seq200937 127 4e-24
seq259364 118 2e-21
seq275772 84.2 4e-11
>seq266287
Length=596
Score = 132 bits (146), Expect = 9e-26
Identities = 237/338 (70%), Gaps = 6/338 (2%)
Strand=Plus/Plus
Query 243874 GAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTGCGGCCATGGTGATGA 243932
|| |||||| ||||| |||||||| | ||| | |||| || || || || | ||| | ||
Sbjct 149 GACGTTGAGCGACTGACTCTGGTCAATGAACG-CGCCTCGGTCGGCAGCAA-GGTCAAGA 206
Query 243933 G-GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAAC 243991
| |||||||||| ||||| | | |||||||||| || ||| | ||| |||| |
Sbjct 207 ACGACCTTCTGAGAAATCTCCCAGACGGTCTTGTAGACGGCCTTCATGTGTGCGGGTATA 266
Query 243992 CCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTC 244051
|| | ||||||||| | ||||||| |||| | |||| | || | ||| | ||| | |
Sbjct 267 CCGTTGATGTTCTGGATTGAGCCCTGGTGGGCAATGATCCGGTTCTTCATCTCATCATCC 326
Query 244052 CACAGGCCCA-AGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCC 244110
|| ||||| | || | ||| ||| || ||| |||||| | ||| ||||| ||
Sbjct 327 CAGAGGCCGGCATCGA-CGAGCTCCTTGAGCAGCCATGGGTTCACGATCTGGAACTCGCC 385
Query 244111 CGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCC 244170
| || ||||||||| ||||| |||| || |||||| | || ||| || ||
Sbjct 386 GGCCAAGACGCGGCGCGTGTAGATGTTGGACGTGTACGGCTCAAAGCACTCGTTGAATCC 445
Query 244171 CAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACA 244208
|| ||||| |||||||| ||||||||||||| ||
Sbjct 446 AAGAATCTGGCTGGTGCTCGCTGTCGGCATGGGCGCCA 483
>seq200937
Length=824
Score = 127 bits (140), Expect = 4e-24
Identities = 298/442 (67%), Gaps = 17/442 (4%)
Strand=Plus/Minus
Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344
||| || |||| || |||||| || |||||| || || || |||||| |||
Sbjct 430 ATCAAGTACCACGAAATCTGGGCCGCATACAAGCGTGCTGAGGCGTCGTTCTGGACGGCC 371
Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGA-GTCA--CTGTCTGAGAACGAA 42401
|||||||| |||||| | ||||| | | || |||||| || ||| ||| ||||
Sbjct 370 GAGGAGATGGACCTGTCGAAGGATATGCACGACTGGGACAACAAGCTGAATGACGACGAG 311
Query 42402 AAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAG 42461
| ||| |||| || | || |||||||| ||| |||| || ||||| ||||| |||
Sbjct 310 CGCTACTTCATCAAGCACGTCCTTGCCTTCTTTGCCACCTCGGATGGCATCGTCAACGAG 251
Query 42462 AACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGC 42521
|||||| | | ||| ||| ||||| | |||| | | | |||||||
Sbjct 250 AACCTGCTCGAGCGCTTCTCGAACGAGGTCC---------AGGC-CCCCGAATCTACGGG 201
Query 42522 TTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTAC 42581
|||||||| || |||||| | || || ||||| ||| | || || |||| |||
Sbjct 200 TTCCAGATCATGATGGAGAACATCCATTCCGAGGTCTACTCGCTCCTCATCGACACTTAC 141
Query 42582 ATCCTGGATCCCGTC-GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640
|||| || | || | ||||| | |||||| ||| || || ||||| ||||||||
Sbjct 140 ATCCGCGA-CTCGACAGAGCGCCAGCATCTGTTCGAGGGTATTGACACGATCCCCTGCAT 82
Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGA-TCGAGAGTCCCGACGCAACGTTCGGCG 42699
| || ||||| || ||||||||| |||| | ||| | |||| | ||||| || |
Sbjct 81 CCGCAAAAAGGCAGAGTGGGCGCTCCGGTGGATTTCAGA-TGACGACTCGACGTTTGGTG 23
Query 42700 AGAGGCTGGTAGCCTTTACCGC 42721
| |||| | ||||| ||||
Sbjct 22 AACGGCTTATGGCCTTCGCCGC 1
>seq259364
Length=501
Score = 118 bits (130), Expect = 2e-21
Identities = 134/177 (76%), Gaps = 6/177 (3%)
Strand=Plus/Minus
Query 42969 CTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTC 43028
||| ||||||||||| |||||| |||||| |||||||| ||| ||||||||||| ||
Sbjct 459 CTGATCGGCATGAACGCCGACCTTATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTT 400
Query 43029 CT-GTGCCAGATGGGTCTCAGCCGC--CTCTACAACACGCCGTGCCCCTTCGACTTTATG 43085
|| || | | || | | ||| | ||||||| | | | ||| ||||| || |||
Sbjct 399 CTTGTTGCCGTCGG---TAACCCGAAGCACTACAACGCTCAGAACCCGTTCGATTTCATG 343
Query 43086 GAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTAC 43142
|||| ||||| | | || |||||||||||||||||||||||||| ||||||||
Sbjct 342 GAGATGATCTCCCTCGCCGGAAAGACCAACTTTTTCGAGAAGCGCGTTTCCGACTAC 286
>seq275772
Length=427
Score = 84.2 bits (92), Expect = 4e-11
Identities = 204/305 (67%), Gaps = 8/305 (3%)
Strand=Plus/Plus
Query 244334 GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCG 244393
|||||||| | | ||| ||| ||||| || |||| || || | | | | |||
Sbjct 4 GGGCTGCCGGGGAACGTCTCGTACGGACCATCACGCTCCGCGAGTTCAGACGATGCCTCG 63
Query 244394 AGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAG 244453
|| ||| ||| ||||| |||||| |||||| ||| | | ||| |||| | ||
Sbjct 64 AGTGCGCCGTGGTAGAGGGTCTCAAAGATCTGGAGGTTGAGCTTGCGCGCCTC-CGGCGA 122
Query 244454 GTGAAGGGGATGCCC-ATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGAT 244512
|| || ||| ||| | ||| ||| | ||||| || ||||| || |||||||||||
Sbjct 123 GTCAAAGGGGAGCCGGAGGATCTGGAAAGCATCGGCAAGACCCTGGACACCGATGCCGAT 182
Query 244513 GGGTCTGTGTCGCTTGTTGGA---GCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTC 244569
|| | ||| ||| |||| || |||| || |||||||| |||||| | || ||||
Sbjct 183 CGGGCGGTGACGCATGTTCGACTTGCGC---GCCTCGGGCACAGGGTAATAATTAACGTC 239
Query 244570 GATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTC 244629
||| | || || ||| ||||| | | |||| ||| |||| || |||||
Sbjct 240 GATGATGCGATTAAGATTGTAGGTGACAACTTTGGCGACCTCGTGCAGCTTCTCAAAGTT 299
Query 244630 GTACT 244634
|||||
Sbjct 300 GTACT 304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 941068445768080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |