Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_009447.1 Length=52414 Score E Sequences producing significant alignments: (Bits) Value seq152983 87.8 6e-13 >seq152983 Length=1386 Score = 87.8 bits (96), Expect = 6e-13 Identities = 171/251 (68%), Gaps = 14/251 (6%) Strand=Plus/Minus Query 29344 CCATGCACATGTGGCGAGCATTGATCGTGACGTAAACCGCGCGCGGCT-GAACGTGTTGG 29402 ||||||||| ||| || | |||| |||| ||| ||||||| | || | || || Sbjct 540 CCATGCACAGGTGTTCGGCCTCGATCACGACGATCACCCCGCGCGGGTCGAGCTTGC-GG 482 Query 29403 GCCAGCGCATCCGCGATCTGGTTCGTCAGGCGCTCTTGAACTTGCAGGCGCTTGGCGAAA 29462 |||| || || ||||||||| | |||||||| || || || ||| | ||||||||| | Sbjct 481 ACCAGGGCGTCGGCGATCTGGGTGGTCAGGCGTTCCTGCACCTGCGGACGCTTGGCGTAG 422 Query 29463 ATGTCTGCCAGCCGCTTGAGCTTCGAAATACCGA---------CGACTTTGCCGCTCGGG 29513 | ||| ||| |||| |||||||| | ||| || ||||||| |||| Sbjct 421 AGGTCGACCACCCGCGCCAGCTTCGAGAGTCCGGTCACCTGACCGTCTTTGCC---CGGG 365 Query 29514 ATATAGCCGATATGGGCCGTTCCCATGATCGCCGCCATATGGTGTTCGCAGTGCGAATAG 29573 || || || | || ||| || || || | ||| ||||||||||| ||| || Sbjct 364 ATGTACCCCACGTGCGCCACGCCGTGGAACGACACCAGGTGGTGTTCGCACGTCGAGTAC 305 Query 29574 ATCGGGATATC 29584 |||||||| || Sbjct 304 ATCGGGATGTC 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167051725030096