Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq123 152 4e-32
seq28654 91.5 1e-13
>seq123
Length=7390
Score = 152 bits (168), Expect = 4e-32
Identities = 94/98 (96%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 6204 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 6263
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429
|||||||||||||||||||||||| ||||||| |||||
Sbjct 6264 AAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 6301
Score = 152 bits (168), Expect = 4e-32
Identities = 94/98 (96%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 6204 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 6263
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626
|||||||||||||||||||||||| ||||||| |||||
Sbjct 6264 AAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 6301
Score = 82.4 bits (90), Expect = 6e-11
Identities = 50/52 (96%), Gaps = 1/52 (2%)
Strand=Plus/Plus
Query 114145 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 114195
||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 6142 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 6193
Score = 82.4 bits (90), Expect = 6e-11
Identities = 50/52 (96%), Gaps = 1/52 (2%)
Strand=Plus/Plus
Query 115342 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 115392
||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 6142 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 6193
>seq28654
Length=3315
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| |||| ||| ||||| || |||||||| || |||||| || |||||||| || |
Sbjct 1703 ACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGA 1762
Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
| || | || ||||||||||| || ||||| || || ||||||||||| ||
Sbjct 1763 GAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGG 1822
Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGC 34078
| || |||||||| | | |||| |||| || | | |||||| | |||
Sbjct 1823 GATGCCCTCTTTGT-CTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCA 1881
Query 34079 ATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
||| | || || || ||||| ||||| ||||| ||||| || |||||
Sbjct 1882 CTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395721540500566
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |