Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq101679 259 2e-64 seq177095 233 9e-57 seq235485 154 7e-33 >seq101679 Length=5800 Score = 259 bits (286), Expect = 2e-64 Identities = 683/1021 (67%), Gaps = 40/1021 (4%) Strand=Plus/Minus Query 59889 GGATTGCCTCGGTTAGCTGCATCATCGAACATAAGGTAAGGATAGCCAGACTCAAACTGA 59948 || ||| | ||||| | | || |||||||| | ||| || ||||| ||||| ||||| Sbjct 5354 GGGTTGGCCCGGTTCACCGTGTCCTCGAACATGATGTAGGGGTAGCCCGACTCGAACTGC 5295 Query 59949 ACCTCTGCGATGGTCTGGAACAGCTTTCGAGCGTCGATAAAGGTCTTAGCGATCCTATCA 60008 | ||| |||| ||||||||| | || || || | ||| || ||| ||||| Sbjct 5294 AGCTCGGCGAGGGTCTGGAAGAACTCGCGGGCCTTGATCTTGGACTTTCGGATCCGCCGG 5235 Query 60009 TCTTTTAGCCACGTGTCGTACATCTCGGTTACGGAGAACTCGGACAGTGACTTTCCGTAC 60068 || | | | | || |||| | ||| | ||| || |||| | | | ||||| Sbjct 5234 TCCTCGACCATCTCGTGGTACTTGTCGCTGACGTTGATGTCGGCGAACGGCACCCCGTAG 5175 Query 60069 ACCTTATTGATGTCATAAGGAGAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCGG 60128 || | || ||| || || ||| ||| ||| ||| | |||||| || | Sbjct 5174 ACGCGCTCGACGTCGTACGGGCTGAACAGGTACATGTCGTCGTTGCGCTTGGCCAGCTCG 5115 Query 60129 AACGTGACATCAGGAACGATAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCG 60188 || |||| || || | | || || || || || ||||| || ||||||||||||||| Sbjct 5114 AAGGTGATGTCGGGGATCACCACACCCAGCGACAGGGTCTTGATGCGGATCTTCTCGTCG 5055 Query 60189 GCGTTTTCACGCTTGGTATCCAGGAA-CGCAAGGATGTCGGGGTGGTGTGCGTTCAAATA 60247 ||||| || |||||||| || ||||| || || ||||||||||| || |||| || || Sbjct 5054 GCGTTCTCGCGCTTGGTGTCGAGGAAGCGGTAG-ATGTCGGGGTGATGGGCGTGCAGGTA 4996 Query 60248 TACCGCCCCTGCGCCCTGCCTTGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAG 60307 ||||| || || ||||| | || || || ||||| | |||| ||| ||| || || Sbjct 4995 CACCGCGCCGGCACCCTGGCGCGCGCCGAGCTGGTTGGCGTAGCTGAACGAATCCTCGAG 4936 Query 60308 AATCTTCATCACAGGGATGACTCCAGAGGCCTGACCTTCTCGA--CCCTTAATCGGAGCT 60365 | |||||| | |||||||| || ||| ||| ||||||| ||| ||||| || Sbjct 4935 CAGCTTCATGATGGGGATGACACCCGAGCTCTG--GTTCTCGATTTTCTTGATCGGCGCG 4878 Query 60366 CCTGCCTCGCGGAGGTTG--GAGAATCCAATGCCGACTCCGCCACCACGCTTAGACAGCT 60423 || |||||||| |||| ||| | ||| | |||||||||| |||||||| ||||||| Sbjct 4877 CCGTGCTCGCGGATGTTGCTGAGCA-GCAACG-CGACTCCGCCGCCACGCTTCGACAGCT 4820 Query 60424 GGAG---AGAGTCCTGAACGATTCGACCGATGGACCCCATGGTGTCCTGAACATCGAGGA 60480 | || |||| ||| || |||||||| ||| ||||| |||||| | || | Sbjct 4819 GCAGTGCCGAGT--TGATGGA-GCGACCGATCGACTCCATGTTGTCCTCGATGCGCAGCA 4763 Query 60481 TGAAGCATGATACTGGCTTGC----CTGCGTCGAGAAGCCCCGCGTTGAGGAAGGTCGGA 60536 |||||| || || |||| || |||| || | |||| ||||||||| ||||| Sbjct 4762 GGAAGCACGACACCGGCTCGCCGCGCTGCTTCTTG----CCCGAGTTGAGGAACGTCGGG 4707 Query 60537 GTTGCAGGCTGGAAGATTCCCTTGATAATGAGATCCACAAG-GGACTCAGCGTGCTCGAA 60595 || || ||||||||| || ||| || || || || | || | || | ||| Sbjct 4706 GTGGCCGGCTGGAAGCGACCGGAGATGATCTCGTCGACGAGCGCACGC-GCCAGTTCG-- 4650 Query 60596 GTCTTCGCTGTAGTGGA-TGGCCGTGAGTACC------ACTCGATCTTCGTAGCGCTCGT 60648 || |||| || | || | | | | | ||| || || || ||| | |||||| Sbjct 4649 GT-GTCGCCGTCGGCGAGCGTCAGCGCG-ACCATGCAGACCCGGTCCTCGAACCGCTCGA 4592 Query 60649 AATAGCGCTTGCCATCGTTAGTCTTCAAGGCGTAGGAGTTATAGAACTTCAGCGCTCCCA 60708 || ||||| || ||| ||||| | || ||| ||| | ||| |||| | ||| |||| Sbjct 4591 GGTAACGCTTCCCGTCGAAGGTCTTGAGGGTGTACGAGGTGTAGTACTTGAACGCGCCCA 4532 Query 60709 TGTAGGTCTTGAAGCGGAACTTGTGTCCGTAGGCCTGTTTCATGAGTCTCTTTAGGTCCT 60768 | | ||| ||| |||||||| | |||||| | | ||| ||| | | || Sbjct 4531 GGAACGTCGGGAACCGGAACTTCTTCTTGTAGGCGTAGCCGAAGAGGTCCTTCACGAACT 4472 Query 60769 CGAAGCCGTAGCGAAGGACGACATCCTTGTCCCATAGTTGGACTTCCTCTGTGAGGTGAT 60828 || | ||||||| || || || | | | |||| | | ||||| ||||| | Sbjct 4471 CGCGGTCGTAGCGCTCGAGGAACTC--GGGCTCGTAGTAGTTC-TCCTCGACGAGGTAGT 4415 Query 60829 CCACCTTCTCCTCTAGGGAGTGAAAGAATACGGTGTTCTTGTTGACGTGCTCCAGGAAGT 60888 | | |||||| || ||| ||| ||||| || ||||||| ||||||||||| |||||||| Sbjct 4414 CGAGCTTCTCGTCGAGGTCGTGGAAGAACACCGTGTTCTGGTTGACGTGCTGCAGGAAGT 4355 Query 60889 A 60889 | Sbjct 4354 A 4354 >seq177095 Length=919 Score = 233 bits (258), Expect = 9e-57 Identities = 393/563 (70%), Gaps = 8/563 (1%) Strand=Plus/Plus Query 59910 TCATCGAACATAAGGTAAGGATAGCCAGACTCAAACTGAACCTCTGCGATGGTCTGGAAC 59969 || |||||||| | ||| |||||||| ||||| ||||| | ||| |||| |||||||| Sbjct 310 TCCTCGAACATGACGTACGGATAGCCCGACTCGAACTGGATCTCGGCGAGCGTCTGGAAG 369 Query 59970 AGCTTTCGAGCGTCGATAAAGGTCTTAGCGATCCTATCATCTTTTAG-CCACGT-GTCGT 60027 | | || || | ||| |||| |||| | | || | | ||| | || || Sbjct 370 AACAGGCGCGCCTTGATCTTCTTCTTGTGGATCGACT--TGTTGTCGACCATCTCGTGGT 427 Query 60028 ACATCTCGGTTACGGAGAACTCGGACAGTGACTTTCCGTACACCTTATTGATGTCATAAG 60087 || |||| | ||| || ||||| | | | |||||| || | || ||| || | Sbjct 428 ACTTCTCCGAGACGTTGATCTCGGCGAACGGCACTCCGTAGACGCGCTCGACGTCGTACG 487 Query 60088 GAGAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCGGAACGTGACATCAGGAACGA 60147 | ||||| ||| ||| |||| ||| ||| || || |||||||| || || | || Sbjct 488 GCGAGAACAGGTACATGTCCTCGTTCTTCTTCGCCAGCTCGAACGTGATGTCGGGGATGA 547 Query 60148 TAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTCACGCTTGGTAT 60207 || || || || || ||||| || |||||||||||||| ||||| || |||||||| | Sbjct 548 CGACACCCAGCGACAGGGTCTTGATGCGGATCTTCTCGTCCGCGTTCTCCCGCTTGGTGT 607 Query 60208 CCAGGAACGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCCTGCGCCCTGCC 60267 |||||||| | ||||||||||||||| |||| || || ||||| || || ||||| | Sbjct 608 CCAGGAACCGCATGATGTCGGGGTGGTGCGCGTGCAGGTACACCGCGCCGGCACCCTGAC 667 Query 60268 TTGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAGAATCTTCATCACAGGGATGA 60327 ||||| || ||||| | |||||||||| || || || | ||||||||| ||||||| Sbjct 668 GGGCACCGAGCTGGTTGGCGTAGGAGAAGGAGTCCTCCAGCAGCTTCATCACCGGGATGA 727 Query 60328 CTCCAGAGGCCTGACCTTCTCGACC--CTTAATCGGAGCTCCTGCCTCGCGGAGGTTGGA 60385 | || ||| ||| ||||||| | ||| ||||| || || ||| |||| ||| || Sbjct 728 CGCCGGAGCTCTG--GTTCTCGATCTTCTTGATCGGGGCGCCGTGCTCACGGATGTTCGA 785 Query 60386 GAATCCAATGCCGACTCCGCCACCACGCTTAGACAGCTGGAGAGAGTCCTGAACGATTCG 60445 | | | | || |||||||| ||||| |||||||| || | | | | | || Sbjct 786 CAGCAGCAGGGCCACACCGCCACCGCGCTTGGACAGCTGCAGGGCGGAGTTGATGCCGCG 845 Query 60446 ACCGATGGACCCCATGGTGTCCT 60468 |||| ||| ||||| |||||| Sbjct 846 GGCGATCGACTCCATGTTGTCCT 868 >seq235485 Length=973 Score = 154 bits (170), Expect = 7e-33 Identities = 255/365 (70%), Gaps = 10/365 (3%) Strand=Plus/Minus Query 58452 CGGATGTAGTACAGAGACTTCAGGCCCTTCTTGTGAGCGTAGATCTGCGCTCGGTTAATG 58511 |||||||||||||| | ||| | |||||| |||||||||||||| ||| ||| Sbjct 475 CGGATGTAGTACAGCGTCTTGATGCCCTTGCGCCACGCGTAGATCTGCGCCTTGTTGATG 416 Query 58512 TCTCGCGTTGTCGCTGTATCTGGGAAGAACAGCGTGAGAGACATGCCCTGGTCTACCCAA 58571 || || || || || || || |||||||||||| || |||| ||||||||| || Sbjct 415 TCGCGGGTGGTGGCGGTGTCCTTGAAGAACAGCGTCAGCGACAGGCCCTGGTCGACGTGC 356 Query 58572 GGAGATGCTACAGCGTACATATCAATGATCGGGT--TAGGTCCGATAGCGTAAGCGCTAT 58629 | | || | ||||| | || |||||| | ||| ||||| |||| ||| | Sbjct 355 TGGGTGGCCGCCGCGTAGGTGTCGATGATCTTCTCGTAG--CCGATCTCGTAGGCGTCCT 298 Query 58630 CAATTGATTCTACATTCTCATTGGTCACTCCGTACTGAG---GGTAATAGACTCGACCAA 58686 | | || | || || || |||| |||| | | |||| ||||| ||||| | Sbjct 297 CGTAGAACTCGGCGTTGTCGTTCGTCAT---GTACGGCGCCGGGTAGTAGACGCGACCGA 241 Query 58687 GCTTACCCTCCTTGCGAACCTCAACAGGAGAGGTCACAGGGTGAATCGAGGCCGTGGCAT 58746 |||| ||||||||||| | ||| | || | ||| ||||| |||||| |||| | Sbjct 240 GCTTGCCCTCCTTGCGGATCTCGATCTTCGACGCCACCGGGTGGATCGAGCTGGTGGAGT 181 Query 58747 GGTTAATGTACGAGATAGAGCCGGTTGGTGGGATCGCCTGGAGGTTCTGGTTGTAAATAC 58806 ||| ||||| ||||| |||||||| || |||| ||||| |||||||||||||| || | Sbjct 180 TGTTGATGTAGGAGATCGAGCCGGTCGGCGGGACGGCCTGCAGGTTCTGGTTGTAGATGC 121 Query 58807 CATGC 58811 | ||| Sbjct 120 CGTGC 116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 224965728042020