Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_009820.1 Length=58692 Score E Sequences producing significant alignments: (Bits) Value seq232712 197 5e-46 >seq232712 Length=770 Score = 197 bits (218), Expect = 5e-46 Identities = 179/221 (81%), Gaps = 12/221 (5%) Strand=Plus/Minus Query 44778 GCCATCAACCAGCTGCGGCCGGGCGTCGTAGTCATCGAAAACGTAAGGGGGTTGCTGAGT 44837 ||||||| ||| || || ||| || ||| ||||||||||| || |||||| |||| ||| Sbjct 217 GCCATCACCCACCTCCGACCGCGCTACGTGGTCATCGAAAATGTCAGGGGGCTGCTCAGT 158 Query 44838 GCAAAAGCCTATCGCGCAATGGAATCCGCAGAGACAACTG---TGGGAGACG--GA-TCA 44891 || |||| ||||| || ||||||||| || | | || |||||||| || || Sbjct 157 GCCCGAGCCCATCGCCCAGTGGAATCCG---AGTCGAATGGTCTGGGAGACCACGACTC- 102 Query 44892 GGTGGACCTGTTATCCGGGCACTCGGAGCCGTACTCGGAGACCTTGCCGACATCGGGTAT 44951 | |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||| Sbjct 101 --TCGACCTGTTCTCCGAGCACTCGGAGCCGTACTCGGAGACCTTTCCGACATCGGGTAT 44 Query 44952 GACGCGCAGTGGGTCACTGTTGCCGCTTCCGCAGTCGGCGC 44992 ||||||||||||||||||||| |||| ||||| |||| ||| Sbjct 43 GACGCGCAGTGGGTCACTGTTCCCGCCTCCGCCGTCGACGC 3 Score = 168 bits (186), Expect = 3e-37 Identities = 158/196 (81%), Gaps = 14/196 (7%) Strand=Plus/Minus Query 46145 GTTGTGATCGAGAACGTGAGGGGGATATTGAGTGCCGCCGCCAATCGCACAGTGGAATCC 46204 || || ||||| || || |||||| | | |||||| ||| ||||| ||||||||||| Sbjct 190 GTGGTCATCGAAAATGTCAGGGGGCTGCTCAGTGCCCGAGCCCATCGCCCAGTGGAATCC 131 Query 46205 GA--CGA--GGCAACTTTGGGAGACG--GA-TCAGGTGGACCTGTTATCCGGGCACTCGG 46257 || ||| || | |||||||| || || | |||||||| |||| |||||||| Sbjct 130 GAGTCGAATGG----TCTGGGAGACCACGACTC---TCGACCTGTTCTCCGAGCACTCGG 78 Query 46258 AGCCGTACTCGGAGACCTTGCCGACATCGGGTATGACGCGCAGTGGGTCACTGTTGCCGC 46317 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 77 AGCCGTACTCGGAGACCTTTCCGACATCGGGTATGACGCGCAGTGGGTCACTGTTCCCGC 18 Query 46318 TTCCGCAGTCGGCGCC 46333 ||||| |||| |||| Sbjct 17 CTCCGCCGTCGACGCC 2 Score = 120 bits (132), Expect = 1e-22 Identities = 163/225 (72%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 45813 GAGGTGGAGTCATGAGGATTGGCAGTCTCTTCTCCGGCGCTGGCGGTCTCGATCTGGCTG 45872 ||| ||| ||||||||||| || |||||||| || ||||| ||||| || || | Sbjct 466 GAGTTGGCGTCATGAGGATCGGATCACTCTTCTCGGGGTACGGCGGCCTCGACCTCGC-G 408 Query 45873 TG-GAGGAGGTGTTCGGCGGGCGCACGGTGTGGCACTGCGAGATTGACCCCGCCGCGTCG 45931 || |||| | | ||||| | | || | |||||| ||| || ||||| || |||||| Sbjct 407 TGTGAGGCGTTCTTCGGTGCGACGACCGCATGGCACGCCGACATCGACCCTGCTGCGTCG 348 Query 45932 AAGGTGCTGGCCCACCGTTGGCCCAGCGTGCCGAACTTCGGCAGTGTCACCGACATCGAC 45991 | | || ||||||| ||||| | |||||||||| |||| |||||| ||||||| Sbjct 347 CGGATCCTCGCCCACCACTGGCCGACCGTGCCGAACCACGGCGACATCACCGCCATCGAC 288 Query 45992 TGGAGCACGGTTGAACCCGTAGACGTGCTGTGTGGCGGCTTCCCG 46036 |||| |||| ||||| || |||||| | ||||| |||||| Sbjct 287 TGGACTGCGGTCGAACCAGTGGACGTGATCACCGGCGGGTTCCCG 243 Score = 105 bits (116), Expect = 3e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44483 CATGAAAATCGGCTCGTTGTTCTCTGGTGCTGGCGGCCTCGACATCGCTGTTGAGCAGTT 44542 ||||| ||||| || | ||||| || |||||||||||| |||| |||| ||| Sbjct 456 CATGAGGATCGGATCACTCTTCTCGGGGTACGGCGGCCTCGACCTCGCGTGTGAGGCGTT 397 Query 44543 CTTCGGTGCCCGCACCGTTTGGCACTGTGAGCTGAACCCGGCCGCCGCAAAGGTGCTCGC 44602 ||||||||| |||| |||||| || | |||| || || | | | ||||| Sbjct 396 CTTCGGTGCGACGACCGCATGGCACGCCGACATCGACCCTGCTGCGTCGCGGATCCTCGC 337 Query 44603 GCACCGCTGGCCCGGCGTACCGAACCTCGGTGACATCACCGCTGTCGACTGGTCGACCGT 44662 |||| |||||| ||| ||||||| ||| ||||||||||| |||||||| | | || Sbjct 336 CCACCACTGGCCGACCGTGCCGAACCACGGCGACATCACCGCCATCGACTGGACTGCGGT 277 Query 44663 CGAACCCGTCGACATTCTCGCGGGCGGATTTCC 44695 |||||| || ||| | || | ||||| || || Sbjct 276 CGAACCAGTGGACGTGATCACCGGCGGGTTCCC 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187075223001284