Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq10526 239 5e-58
seq28654 118 1e-21
seq27511 87.8 2e-12
seq193070 86.0 7e-12
seq76306 84.2 2e-11
>seq10526
Length=5062
Score = 239 bits (264), Expect = 5e-58
Identities = 645/984 (66%), Gaps = 27/984 (3%)
Strand=Plus/Minus
Query 94966 AAAGTGACGGGGGCTTATTTTGTAGAATGGGGCGTGTACGATCGTAAGTTTCCCGCGGAC 95025
||||| ||| || || || ||||||||||| || || | | || || |||| |||
Sbjct 4132 AAAGTTGTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGAT 4073
Query 95026 AAGGTGCCCATTCCCAATCTGACGCATCTATTGTACGGTTTCATACCCATTTGCGGAGGC 95085
| || || || ||||| || ||| | | ||||| || || || |||||||| ||
Sbjct 4072 CGTATACCTATACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGT 4013
Query 95086 GACGGTATCAACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAATCA 95145
||||| || || || ||| ||||| || | ||| ||| | || |||| |||
Sbjct 4012 GACGGCATTAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGATCC 3953
Query 95146 TGTGCCGGCAGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAAAA 95205
||| |||| | || || ||||| || |||||||| | | || ||||||||
Sbjct 3952 TGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 3893
Query 95206 CCGCAAAAAGGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCATG 95265
|| |||||||| | || || || || || ||| ||||| |||||||| | |||
Sbjct 3892 CCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATG 3833
Query 95266 GCTATTCGCAAACATAA-----TCCTCATTTGAAAATTTTGCCTAGCATCGGTGGTTGGA 95320
|| | || | || ||| | ||||| ||| | || || ||||| ||||
Sbjct 3832 -----TCACTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGA 3778
Query 95321 CACTGAGCGACCCTTTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTTGTGGACT 95380
| || ||| ||||||| ||||| | ||| | | ||| ||| | ||||||| | |
Sbjct 3777 CGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAGAGAACACGATTTGTGCAGT 3718
Query 95381 CTGTTCGTGAATTCTTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAGT 95440
| || || || | | | ||||| || |||||||| || || ||||| |||||||
Sbjct 3717 CAGTAAAGGAGTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGT 3658
Query 95441 TTCCCGGCGGAAAGGGTGCCAACCCCGACGTAGGCGATCCTAGCGTGGATGGAAACACAT 95500
| || || || || ||||| ||||| ||| | || | || | | ||||| | |
Sbjct 3657 TCCCTGGTGGCAAAGGTGCTAACCCTGACCTCGG-TAGCCCA--GAAGATGGTGATTGTT 3601
Query 95501 ATGTAACTCTATTGAAAGAACTACGCCTAATGCTAGACGAACTGGGTG-------TGGTG 95553
|||||| | | |||||||| |||| ||||| || || || || ||||
Sbjct 3600 ATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCTCTCTGCTAAGAATGGT- 3542
Query 95554 AACAAACGCGTGTACGAGTTGACCAGCGCCGTGGGAGCGGGCTACGATAAAATAGACGTG 95613
|| ||| ||||| || || || | | || || | |||||||| | ||
Sbjct 3541 AAGAAA------TACGAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTT 3488
Query 95614 ATAGATTACTCTTCGGCTAGTCAATATTTGGATCATGTGTTTTTAATGAGTTACGACTTT 95673
| || || | |||| | ||| |||||||| | || || ||||||||||||||
Sbjct 3487 GTTGACTATGGTAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTC 3428
Query 95674 AAAGGCGCATGGTCCAACACGGATTTGGGTCATCAAACACCATTGTACGCACCTTCGTGG 95733
|| || || ||||| || | | || |||||||| ||||||||||| ||| |||||
Sbjct 3427 AAGGGAGCCTGGTCAAATGATACTCTTGGACATCAAACGCCATTGTACGCGCCTGCGTGG 3368
Query 95734 AACCCTGACGACAAGTACACAACTGACTATGCCGTAAAAGAACTGCTTAAGCAAAAAGTA 95793
|| || | || | |||||| |||||| || |||||| | |||| ||| |||
Sbjct 3367 AATCCCAAGGAAACTTACACATCTGACTTTGGAGTAAAATACTTGCTGGCGCAGGGAGTG 3308
Query 95794 CCTTCCAACAAAATTGTTGTGGGAGTCGCCATGTACGGCAGAGGGTGGAGTGGTGTGCAC 95853
| | || || ||||| || || || || ||||| || | || |||| ||| || ||
Sbjct 3307 AATCCTAAGAAGATTGTAGTAGGTGTTGCTATGTATGGTCGTGGCTGGACTGGCGTTCAT 3248
Query 95854 GATTACAAAAACAATAACGTATTTACGGGCGTCGCCACAGGTCCGGTAAAAGGCACATGG 95913
|||||| || |||| | || || ||| ||| || || || || ||||| || |||
Sbjct 3247 GATTACGAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGG 3188
Query 95914 GAAAACGGTGTCGTCGATTATAGG 95937
|| |||| || || || || |||
Sbjct 3187 CAAGACGGAGTGGTTGACTACAGG 3164
>seq28654
Length=3315
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
|||||||| |||||| || ||||| ||||| ||| ||| || |||||||| || ||||
Sbjct 791 ACCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTATAGTCAGA 850
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| || | || || |||||||| |||||||| ||||| || || || || | ||
Sbjct 851 GAGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGG 910
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | ||| ||||| ||| || ||| | | | | ||||| | ||| ||
Sbjct 911 AATACCCTCTTTGTCTTGGATCTTAGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAAC 970
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | ||||| ||||| || || || |||||||||||||| |||||
Sbjct 971 TTCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 1018
Score = 93.3 bits (102), Expect = 5e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | ||| || |||| || ||| || |||||||||||||||| || ||| || |
Sbjct 1259 ACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACC 1318
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || | ||||| ||||| || ||||| ||||| ||||| | || | || ||||||
Sbjct 1319 ATCTTCCAATTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTT 1378
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
||| ||||| ||||| || | | ||||| | ||| || || | || ||
Sbjct 1379 ATCCTGTATTTTAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAAT 1438
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||| || || || | || || ||||| ||||||||
Sbjct 1439 GGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 1474
Score = 87.8 bits (96), Expect = 2e-12
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
|||||| ||||| || | || || ||||||||||| || |||| ||||| || |
Sbjct 2399 ACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCC 2458
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || | ||||| |||||||| || | || || || || | || | || |||||
Sbjct 2459 GTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTT 2518
Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
|| | ||| |||| | ||| | | | | || ||| | ||| || || | || |
Sbjct 2519 GT-CTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAA 2577
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
||||||| ||||| || || || |||||||| ||||||||
Sbjct 2578 TGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 2617
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||| | ||||| || | ||| | || ||||||||| || ||||| ||||
Sbjct 1703 ACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGA 1762
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || || | || || | ||||||||||| || || || |||||||| || | |||
Sbjct 1763 GAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGG 1822
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| || ||| ||||| |||||| ||| | | | | || || | ||||||
Sbjct 1823 GATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCAC 1882
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | || ||||| || || ||||| || || ||||| || |||||
Sbjct 1883 TTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930
>seq27511
Length=800
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053
|||| |||||| ||||| || ||||| |||||||| ||||| | || || || |
Sbjct 431 CGCAGCACCAAGTGCAAAGTAGATTCCTTCTGAATATTATAATCTGACAATGTACGTCCA 372
Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113
|| || ||||| || || || || || || | ||| ||||| | || | || || |||
Sbjct 371 TCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGAATGCCTTCTTTG 312
Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
|| ||| | |||| | | | | | | || || | |||||| || | |||||
Sbjct 311 TCT-TGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGAT 253
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|||||||| || || ||||||||||| |||||||||
Sbjct 252 AGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 216
>seq193070
Length=305
Score = 86.0 bits (94), Expect = 7e-12
Identities = 55/60 (92%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079
|||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| |||
Sbjct 2 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAAGAT 61
>seq76306
Length=316
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| || |||| |||||| || || ||||| || ||||| || ||||| || || | |
Sbjct 283 CCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAC 224
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
| || ||| | || || || ||||| || ||||| || |||| || || || | ||
Sbjct 223 AATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 164
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCAC 42160
| || |||||||| ||| | |||| | ||| | | || || | ||||||
Sbjct 163 ATGCCTTCCTTGTCT-TGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCAC 105
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | ||||||||||| || |||| || ||||| |||||||||||
Sbjct 104 TTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 57
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 541331362096720
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