Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_010811.2
Length=231255
Score E
Sequences producing significant alignments: (Bits) Value
seq231474 96.9 5e-15
seq84152 91.5 2e-13
seq154643 89.7 8e-13
>seq231474
Length=516
Score = 96.9 bits (106), Expect = 5e-15
Identities = 186/272 (68%), Gaps = 8/272 (3%)
Strand=Plus/Plus
Query 41612 ATGCTGTGGGCGCAGGACTTCGCTCGGCAGAATCGTGCGGTGATGTTGCAGATCGTGATC 41671
|||| |||||| ||| ||||||| | || || || | || |||| |||| ||| |
Sbjct 181 ATGCGGTGGGCCCAGCACTTCGCCCTGCTCAACCGCGAGGAGATGATGCACCGCGT---C 237
Query 41672 CAAGCGCTGCGTCGTC----ATCTGCCGGCCTTCGAGCTGACGGAAGAGGCGGTGAACTG 41727
|| | | | ||||| | ||| || || || | |||| ||| || | |||||
Sbjct 238 CAGGAGGT-CGTCGCGGACGAGCTGGGCGCGACCGTGCAGGCGGACGAGACGATCAACTG 296
Query 41728 CCACCACAACTATTGTGAGCAGGAGAACCACTTCGGGCGCAACGTGTGGGTCACGCGCAA 41787
|||||||||||| |||| ||| | ||||| ||| | |||||||| | |||||
Sbjct 297 CCACCACAACTACACCGAGCGCGAGCGCGTGTTCGGTCGCGAGGTGTGGGTGTCCCGCAA 356
Query 41788 GGGTGCGGTTCGTGCACGTGAAGACGATCTGGGGATCATTCCGGGATCCATGGGTACGAA 41847
||| ||| | ||||| | | | |||| ||| | || || || || ||||| |||
Sbjct 357 GGGCGCGATCCGTGCGGGCAAGGGTGATCGCGGGCTGATCCCCGGCTCGATGGGCACGGC 416
Query 41848 GTCGTACATCGTCAAGGGCAAGGGCAATCCGC 41879
||||||| |||||| |||| |||| | ||||
Sbjct 417 GTCGTACGTCGTCACGGGCCTGGGCTACCCGC 448
>seq84152
Length=5826
Score = 91.5 bits (100), Expect = 2e-13
Identities = 113/154 (73%), Gaps = 3/154 (2%)
Strand=Plus/Plus
Query 40967 CTGCCCTTCATCCATCCGCACGGCGTCGCGTTGATGCCGGACGCGCACGCAGGCATCGGC 41026
||||||||| | || ||||||| | |||||||||||||| |||||| |||| ||
Sbjct 4442 CTGCCCTTCGTGCACCCGCACG---TGGCGTTGATGCCGGATGCGCACTACGGCAAGGGA 4498
Query 41027 AGCACGGTAGGATCGGTGATCGCTACGCAAGGTGCCATCATTCCGGCGGCGGTGGGCGTG 41086
| |||| || | || ||| | ||| | ||| |||| ||||| ||||| || ||
Sbjct 4499 TCCGCGGTCGGTACCGTCATCCCGACGGTCGACGCCGTCATCCCGGCCGCGGTCGGGGTC 4558
Query 41087 GACATCGGCTGCGGCATGGTGGCGGTTCGTACCA 41120
|||||||| ||||||||| | || || || ||||
Sbjct 4559 GACATCGGGTGCGGCATGATCGCCGTCCGGACCA 4592
Score = 89.7 bits (98), Expect = 8e-13
Identities = 136/191 (71%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 41378 GAGCAGCTTGGCACGCTGGGTTCCGGCAACCACTTCATTGAACTGTGCGTGGACCAGTCG 41437
|||||||| || |||| || ||||||||||||||| || |||||| | ||| ||||
Sbjct 4728 GAGCAGCTCGGGTCGCTCGGCGGCGGCAACCACTTCATCGAGCTGTGCCTCGACGAGTCC 4787
Query 41438 CAAGACGTGTGGATCATGCTGCATAGCGGTTCGCGCGGTGTGGGCAACATCATCG-GCCG 41496
| |||||||| | ||||| ||||||||| ||||| |||||| |||| || |
Sbjct 4788 GATCGGGTGTGGATGTTCCTGCACTCCGGTTCGCGGGGTGTCGGCAACCGGATCGCGCAG 4847
Query 41497 TCACTACATCGAGCGTGCGCAGAAGGAGTGCGGCATGTGGCACAGCAGCCTGCCGCACAA 41556
|| |||||| | ||||||||| | | | | |||||||| | || ||| ||
Sbjct 4848 CGAC-ACATCGCGATCGCGCAGAAGCTGGCCAGGAAGTGGCACATCGTGCTCCCGAACCC 4906
Query 41557 CGATCTCGCGT 41567
|| |||||||
Sbjct 4907 GGACCTCGCGT 4917
>seq154643
Length=325
Score = 89.7 bits (98), Expect = 8e-13
Identities = 65/74 (88%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 186529 TGGTCCGAGTGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACC 186588
||||| | | || ||||||||||||| |||||||||| ||||||| |||||||||| |||
Sbjct 325 TGGTCGGGGCGATAGGATTCGAACCTGCGACCCCCTGGTCCCAAACCAGGTGCGCT-ACC 267
Query 186589 AGACTGCGCTACAC 186602
||||||||| ||||
Sbjct 266 AGACTGCGCCACAC 253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 737325370166200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |