Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_010811.2 Length=231255 Score E Sequences producing significant alignments: (Bits) Value seq231474 96.9 5e-15 seq84152 91.5 2e-13 seq154643 89.7 8e-13 >seq231474 Length=516 Score = 96.9 bits (106), Expect = 5e-15 Identities = 186/272 (68%), Gaps = 8/272 (3%) Strand=Plus/Plus Query 41612 ATGCTGTGGGCGCAGGACTTCGCTCGGCAGAATCGTGCGGTGATGTTGCAGATCGTGATC 41671 |||| |||||| ||| ||||||| | || || || | || |||| |||| ||| | Sbjct 181 ATGCGGTGGGCCCAGCACTTCGCCCTGCTCAACCGCGAGGAGATGATGCACCGCGT---C 237 Query 41672 CAAGCGCTGCGTCGTC----ATCTGCCGGCCTTCGAGCTGACGGAAGAGGCGGTGAACTG 41727 || | | | ||||| | ||| || || || | |||| ||| || | ||||| Sbjct 238 CAGGAGGT-CGTCGCGGACGAGCTGGGCGCGACCGTGCAGGCGGACGAGACGATCAACTG 296 Query 41728 CCACCACAACTATTGTGAGCAGGAGAACCACTTCGGGCGCAACGTGTGGGTCACGCGCAA 41787 |||||||||||| |||| ||| | ||||| ||| | |||||||| | ||||| Sbjct 297 CCACCACAACTACACCGAGCGCGAGCGCGTGTTCGGTCGCGAGGTGTGGGTGTCCCGCAA 356 Query 41788 GGGTGCGGTTCGTGCACGTGAAGACGATCTGGGGATCATTCCGGGATCCATGGGTACGAA 41847 ||| ||| | ||||| | | | |||| ||| | || || || || ||||| ||| Sbjct 357 GGGCGCGATCCGTGCGGGCAAGGGTGATCGCGGGCTGATCCCCGGCTCGATGGGCACGGC 416 Query 41848 GTCGTACATCGTCAAGGGCAAGGGCAATCCGC 41879 ||||||| |||||| |||| |||| | |||| Sbjct 417 GTCGTACGTCGTCACGGGCCTGGGCTACCCGC 448 >seq84152 Length=5826 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/154 (73%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 40967 CTGCCCTTCATCCATCCGCACGGCGTCGCGTTGATGCCGGACGCGCACGCAGGCATCGGC 41026 ||||||||| | || ||||||| | |||||||||||||| |||||| |||| || Sbjct 4442 CTGCCCTTCGTGCACCCGCACG---TGGCGTTGATGCCGGATGCGCACTACGGCAAGGGA 4498 Query 41027 AGCACGGTAGGATCGGTGATCGCTACGCAAGGTGCCATCATTCCGGCGGCGGTGGGCGTG 41086 | |||| || | || ||| | ||| | ||| |||| ||||| ||||| || || Sbjct 4499 TCCGCGGTCGGTACCGTCATCCCGACGGTCGACGCCGTCATCCCGGCCGCGGTCGGGGTC 4558 Query 41087 GACATCGGCTGCGGCATGGTGGCGGTTCGTACCA 41120 |||||||| ||||||||| | || || || |||| Sbjct 4559 GACATCGGGTGCGGCATGATCGCCGTCCGGACCA 4592 Score = 89.7 bits (98), Expect = 8e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 41378 GAGCAGCTTGGCACGCTGGGTTCCGGCAACCACTTCATTGAACTGTGCGTGGACCAGTCG 41437 |||||||| || |||| || ||||||||||||||| || |||||| | ||| |||| Sbjct 4728 GAGCAGCTCGGGTCGCTCGGCGGCGGCAACCACTTCATCGAGCTGTGCCTCGACGAGTCC 4787 Query 41438 CAAGACGTGTGGATCATGCTGCATAGCGGTTCGCGCGGTGTGGGCAACATCATCG-GCCG 41496 | |||||||| | ||||| ||||||||| ||||| |||||| |||| || | Sbjct 4788 GATCGGGTGTGGATGTTCCTGCACTCCGGTTCGCGGGGTGTCGGCAACCGGATCGCGCAG 4847 Query 41497 TCACTACATCGAGCGTGCGCAGAAGGAGTGCGGCATGTGGCACAGCAGCCTGCCGCACAA 41556 || |||||| | ||||||||| | | | | |||||||| | || ||| || Sbjct 4848 CGAC-ACATCGCGATCGCGCAGAAGCTGGCCAGGAAGTGGCACATCGTGCTCCCGAACCC 4906 Query 41557 CGATCTCGCGT 41567 || ||||||| Sbjct 4907 GGACCTCGCGT 4917 >seq154643 Length=325 Score = 89.7 bits (98), Expect = 8e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 186529 TGGTCCGAGTGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACC 186588 ||||| | | || ||||||||||||| |||||||||| ||||||| |||||||||| ||| Sbjct 325 TGGTCGGGGCGATAGGATTCGAACCTGCGACCCCCTGGTCCCAAACCAGGTGCGCT-ACC 267 Query 186589 AGACTGCGCTACAC 186602 ||||||||| |||| Sbjct 266 AGACTGCGCCACAC 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 737325370166200