Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_011054.1
Length=58037
Score E
Sequences producing significant alignments: (Bits) Value
seq219746 201 4e-47
>seq219746
Length=1062
Score = 201 bits (222), Expect = 4e-47
Identities = 240/326 (74%), Gaps = 0/326 (0%)
Strand=Plus/Plus
Query 44946 TCCCCGTCGTGCACCAAACACTCCATCGCCCAAGGGTTGAAACGTCTCGACAAACAACCC 45005
||||||||||||||| | ||||| ||||||| || | || || |||||| | |||
Sbjct 16 TCCCCGTCGTGCACCCATCACTCGGTCGCCCAGGGCATCAAGCGCGCCGACAAGCGCCCC 75
Query 45006 GACCTGTTCGGAGAAACCCTCCCCGACGCGGCAGCCGAACGGTCCAGAGCCACCATGTGG 45065
|||| ||| || | ||||||| || |||||||| || | || || ||||||
Sbjct 76 GACCCCAACGGGGAGGTGTTGCCCGACGACGCCGCCGAACGCTCGCGGGCGACGATGTGG 135
Query 45066 GACGTCGTCCGGTTCTCCGAATACCACCACTACCAAGCAGTGATCGTCGAAAACGTCGTC 45125
||||||||||||||| |||| |||||||| |||| | || | ||||||||||||| |||
Sbjct 136 GACGTCGTCCGGTTCGCCGAGTACCACCAGTACCGATCAATCGTCGTCGAAAACGTTGTC 195
Query 45126 GACGTCTACCACTGGCCACCATTCCAAGCGTGGCTGGCAGCGATGGACTCCATCGGCTAC 45185
||||| || |||||| ||| ||||||| || |||| |||| || | ||||||
Sbjct 196 GACGTGTATTTCTGGCCGTTGTTCGCGCCGTGGCTCGCCGCGACGGACGCCCTGGGCTAC 255
Query 45186 GCCCACCACATCGTGTACCTGAACTCGATGCACGCCCAAGTGTTCGGACCTGGTGCCCCG 45245
|||| | ||||||| || |||||||||||||| || ||||||| | |||||
Sbjct 256 AACCACGAGATCGTGTGGCTCAACTCGATGCACGCGCAGCTGTTCGGTCAGCCGGCCCCT 315
Query 45246 CAGTCACGTGACCGCATCTACATCGT 45271
|| ||| | ||| | ||||| ||||
Sbjct 316 CAATCAAGGGACAGGATCTATGTCGT 341
Score = 82.4 bits (90), Expect = 3e-11
Identities = 171/249 (69%), Gaps = 8/249 (3%)
Strand=Plus/Plus
Query 45340 CGTGCGGACCTGTTCGGGCAATGCAGGTGTGGAAGCAGCCCGATCGTGCACCGTGGGGCC 45399
|||| || ||||| | | | || || ||||||| || || ||| | ||||||||
Sbjct 389 CGTGTGGCCCTGTCCAGTCGGTGAAGACCTGGAAGCGCCCGGAGCGT---CAGTGGGGCC 445
Query 45400 GATACAGAGCCCAATACGTGTACCGCTGCCC-ATCGGTGAAGTGCCGCAACCAGATCGTT 45458
| ||| | ||||| ||| || | |||||| | ||| | ||| || ||| | ||
Sbjct 446 GCTACCGCGCCCAGTACACGTTCTCCTGCCCGAACGGCTCA-TGC-GCGGCCACA--GTG 501
Query 45459 GAACCAGTGTTCCGGCCAGCCGCCGAGATCATCGACTGGACGTTGGTTGGCCAGAGGATC 45518
||||| | | || || ||||| || |||||||||||| || || ||| | |||
Sbjct 502 GAACCCGACTGGCGACCCGCCGCAGACATCATCGACTGGTCGCTGCCCGGCACCCGCATC 561
Query 45519 GGAGACCGCGACAAACCGTTGGCGGCCAAAACACTGTCACGCATCCAGGCCGGGATCGAA 45578
|| |||||| | ||| |||| | || || || | || |||||||||||||||||
Sbjct 562 GGTGACCGCAAACGCCCGCTGGCCGAGAAGACCATGACCCGTATCCAGGCCGGGATCGAC 621
Query 45579 CGATACTGG 45587
|| ||||||
Sbjct 622 CGCTACTGG 630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 184986119597154
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |