Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_011054.1 Length=58037 Score E Sequences producing significant alignments: (Bits) Value seq219746 201 4e-47 >seq219746 Length=1062 Score = 201 bits (222), Expect = 4e-47 Identities = 240/326 (74%), Gaps = 0/326 (0%) Strand=Plus/Plus Query 44946 TCCCCGTCGTGCACCAAACACTCCATCGCCCAAGGGTTGAAACGTCTCGACAAACAACCC 45005 ||||||||||||||| | ||||| ||||||| || | || || |||||| | ||| Sbjct 16 TCCCCGTCGTGCACCCATCACTCGGTCGCCCAGGGCATCAAGCGCGCCGACAAGCGCCCC 75 Query 45006 GACCTGTTCGGAGAAACCCTCCCCGACGCGGCAGCCGAACGGTCCAGAGCCACCATGTGG 45065 |||| ||| || | ||||||| || |||||||| || | || || |||||| Sbjct 76 GACCCCAACGGGGAGGTGTTGCCCGACGACGCCGCCGAACGCTCGCGGGCGACGATGTGG 135 Query 45066 GACGTCGTCCGGTTCTCCGAATACCACCACTACCAAGCAGTGATCGTCGAAAACGTCGTC 45125 ||||||||||||||| |||| |||||||| |||| | || | ||||||||||||| ||| Sbjct 136 GACGTCGTCCGGTTCGCCGAGTACCACCAGTACCGATCAATCGTCGTCGAAAACGTTGTC 195 Query 45126 GACGTCTACCACTGGCCACCATTCCAAGCGTGGCTGGCAGCGATGGACTCCATCGGCTAC 45185 ||||| || |||||| ||| ||||||| || |||| |||| || | |||||| Sbjct 196 GACGTGTATTTCTGGCCGTTGTTCGCGCCGTGGCTCGCCGCGACGGACGCCCTGGGCTAC 255 Query 45186 GCCCACCACATCGTGTACCTGAACTCGATGCACGCCCAAGTGTTCGGACCTGGTGCCCCG 45245 |||| | ||||||| || |||||||||||||| || ||||||| | ||||| Sbjct 256 AACCACGAGATCGTGTGGCTCAACTCGATGCACGCGCAGCTGTTCGGTCAGCCGGCCCCT 315 Query 45246 CAGTCACGTGACCGCATCTACATCGT 45271 || ||| | ||| | ||||| |||| Sbjct 316 CAATCAAGGGACAGGATCTATGTCGT 341 Score = 82.4 bits (90), Expect = 3e-11 Identities = 171/249 (69%), Gaps = 8/249 (3%) Strand=Plus/Plus Query 45340 CGTGCGGACCTGTTCGGGCAATGCAGGTGTGGAAGCAGCCCGATCGTGCACCGTGGGGCC 45399 |||| || ||||| | | | || || ||||||| || || ||| | |||||||| Sbjct 389 CGTGTGGCCCTGTCCAGTCGGTGAAGACCTGGAAGCGCCCGGAGCGT---CAGTGGGGCC 445 Query 45400 GATACAGAGCCCAATACGTGTACCGCTGCCC-ATCGGTGAAGTGCCGCAACCAGATCGTT 45458 | ||| | ||||| ||| || | |||||| | ||| | ||| || ||| | || Sbjct 446 GCTACCGCGCCCAGTACACGTTCTCCTGCCCGAACGGCTCA-TGC-GCGGCCACA--GTG 501 Query 45459 GAACCAGTGTTCCGGCCAGCCGCCGAGATCATCGACTGGACGTTGGTTGGCCAGAGGATC 45518 ||||| | | || || ||||| || |||||||||||| || || ||| | ||| Sbjct 502 GAACCCGACTGGCGACCCGCCGCAGACATCATCGACTGGTCGCTGCCCGGCACCCGCATC 561 Query 45519 GGAGACCGCGACAAACCGTTGGCGGCCAAAACACTGTCACGCATCCAGGCCGGGATCGAA 45578 || |||||| | ||| |||| | || || || | || ||||||||||||||||| Sbjct 562 GGTGACCGCAAACGCCCGCTGGCCGAGAAGACCATGACCCGTATCCAGGCCGGGATCGAC 621 Query 45579 CGATACTGG 45587 || |||||| Sbjct 622 CGCTACTGG 630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184986119597154