Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_011103.1
Length=60195
Score E
Sequences producing significant alignments: (Bits) Value
seq230102 134 5e-27
seq259949 95.1 5e-15
>seq230102
Length=351
Score = 134 bits (148), Expect = 5e-27
Identities = 190/262 (73%), Gaps = 4/262 (2%)
Strand=Plus/Plus
Query 43318 aaGCTGATCGACGGCACTTTCCCTGACTATCAGCGCGTCATCCCCACCCAGAACGACAAG 43377
||||||||||||||||| ||||| ||||| ||||||||||||||| || ||||||||||
Sbjct 31 AAGCTGATCGACGGCACCTTCCCCGACTACCAGCGCGTCATCCCCGCCGGGAACGACAAG 90
Query 43378 AAGATCGTCTTCGGCAGCGATGACATGCGCC-AGGCAGCCTCGCGCGTCTCTGTGATCTC 43436
|| | ||| | || | | | |||| |||| | | |||||||| |||||
Sbjct 91 TGCCTCACCGTCGAGCGGGACG-CCTTCGCCAAGGCCGTCGATCGCGTCTCGACCATCTC 149
Query 43437 GTCTGAGCGTGGCCGCGCGGTGAAGTTATCCTTCGCGGAGGG-GGAAGCGAAGCTGGCCG 43495
||| ||||| ||||| ||||||||| | || || |||||| | || || | |
Sbjct 150 GTCCGAGCGCGGCCGTGCGGTGAAGCTCGCCGTCCAGGAGGGCCGCCTCG-CCCTCTCAG 208
Query 43496 TGAGCAGTCCGGAAACCGGAAGCGCCACCGACGAAATCTTCGTGAACTACGATGGCGACC 43555
||| || ||||| |||| |||||||| || ||| || ||| | ||||| | || |
Sbjct 209 TGAACAACCCGGATTCCGGCAGCGCCACGGAGGAACTCGACGTCGATTACGACGCCGCCG 268
Query 43556 CGATCGATATCGGATTCAACGC 43577
| |||||||||| ||||||||
Sbjct 269 CCCTCGATATCGGCTTCAACGC 290
>seq259949
Length=525
Score = 95.1 bits (104), Expect = 5e-15
Identities = 155/217 (71%), Gaps = 21/217 (10%)
Strand=Plus/Plus
Query 19592 TGGCGCATCTGGCCTACATGCTCGCCACGGCATTTCTCGAGAC-GGCCAAAACGATGCAG 19650
||||| || |||| ||| ||| |||||| | || | |||||| ||||| | ||||||
Sbjct 63 TGGCGTATGTGGCTTACGGGCTTGCCACGTCGTTCCACGAGACCGGCCAGCGC-ATGCAG 121
Query 19651 CCGATTGCCGAATACGGCAAGGGCGCTGGCCGCAAGTAC------GGC--GTCAAAGGCA 19702
||| || | || ||| ||| ||||| || || ||| ||| ||||
Sbjct 122 CCGGTTCCAGAGATCGGA-----CGC-GGCCGAAACTATCCATATGGCAAGTCG--GGCA 173
Query 19703 AGTA---CGGGCAGGTTCCCTATGGGCGCGGCTATGTCCAGCTAACGTGGGACTCGAACT 19759
|| | ||| ||||| |||||||||||||| |||||||||| |||||||| | ||||
Sbjct 174 AGCATGGCGGACAGGTCGCCTATGGGCGCGGCGATGTCCAGCTGACGTGGGATTATAACT 233
Query 19760 ACGAGCGCGCCGATAAGGAGCTTGGTCTGAAGGGCGC 19796
|||| ||||| || | ||||| || || ||||||||
Sbjct 234 ACGAACGCGCTGACGACGAGCTCGGGCTAAAGGGCGC 270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 191868997682822
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |