Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_011103.1 Length=60195 Score E Sequences producing significant alignments: (Bits) Value seq230102 134 5e-27 seq259949 95.1 5e-15 >seq230102 Length=351 Score = 134 bits (148), Expect = 5e-27 Identities = 190/262 (73%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 43318 aaGCTGATCGACGGCACTTTCCCTGACTATCAGCGCGTCATCCCCACCCAGAACGACAAG 43377 ||||||||||||||||| ||||| ||||| ||||||||||||||| || |||||||||| Sbjct 31 AAGCTGATCGACGGCACCTTCCCCGACTACCAGCGCGTCATCCCCGCCGGGAACGACAAG 90 Query 43378 AAGATCGTCTTCGGCAGCGATGACATGCGCC-AGGCAGCCTCGCGCGTCTCTGTGATCTC 43436 || | ||| | || | | | |||| |||| | | |||||||| ||||| Sbjct 91 TGCCTCACCGTCGAGCGGGACG-CCTTCGCCAAGGCCGTCGATCGCGTCTCGACCATCTC 149 Query 43437 GTCTGAGCGTGGCCGCGCGGTGAAGTTATCCTTCGCGGAGGG-GGAAGCGAAGCTGGCCG 43495 ||| ||||| ||||| ||||||||| | || || |||||| | || || | | Sbjct 150 GTCCGAGCGCGGCCGTGCGGTGAAGCTCGCCGTCCAGGAGGGCCGCCTCG-CCCTCTCAG 208 Query 43496 TGAGCAGTCCGGAAACCGGAAGCGCCACCGACGAAATCTTCGTGAACTACGATGGCGACC 43555 ||| || ||||| |||| |||||||| || ||| || ||| | ||||| | || | Sbjct 209 TGAACAACCCGGATTCCGGCAGCGCCACGGAGGAACTCGACGTCGATTACGACGCCGCCG 268 Query 43556 CGATCGATATCGGATTCAACGC 43577 | |||||||||| |||||||| Sbjct 269 CCCTCGATATCGGCTTCAACGC 290 >seq259949 Length=525 Score = 95.1 bits (104), Expect = 5e-15 Identities = 155/217 (71%), Gaps = 21/217 (10%) Strand=Plus/Plus Query 19592 TGGCGCATCTGGCCTACATGCTCGCCACGGCATTTCTCGAGAC-GGCCAAAACGATGCAG 19650 ||||| || |||| ||| ||| |||||| | || | |||||| ||||| | |||||| Sbjct 63 TGGCGTATGTGGCTTACGGGCTTGCCACGTCGTTCCACGAGACCGGCCAGCGC-ATGCAG 121 Query 19651 CCGATTGCCGAATACGGCAAGGGCGCTGGCCGCAAGTAC------GGC--GTCAAAGGCA 19702 ||| || | || ||| ||| ||||| || || ||| ||| |||| Sbjct 122 CCGGTTCCAGAGATCGGA-----CGC-GGCCGAAACTATCCATATGGCAAGTCG--GGCA 173 Query 19703 AGTA---CGGGCAGGTTCCCTATGGGCGCGGCTATGTCCAGCTAACGTGGGACTCGAACT 19759 || | ||| ||||| |||||||||||||| |||||||||| |||||||| | |||| Sbjct 174 AGCATGGCGGACAGGTCGCCTATGGGCGCGGCGATGTCCAGCTGACGTGGGATTATAACT 233 Query 19760 ACGAGCGCGCCGATAAGGAGCTTGGTCTGAAGGGCGC 19796 |||| ||||| || | ||||| || || |||||||| Sbjct 234 ACGAACGCGCTGACGACGAGCTCGGGCTAAAGGGCGC 270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191868997682822