Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq170880 197 1e-45 >seq170880 Length=1133 Score = 197 bits (218), Expect = 1e-45 Identities = 367/539 (68%), Gaps = 0/539 (0%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 |||||| ||||||||| |||||| || || ||| ||| ||||| ||| || || ||| Sbjct 586 AATTACAATTACTTTGGCTTCAAGACCCTTGAGCGGTCCTACCTTCTCCGCATCGACGGC 645 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | || ||||||| ||||| || |||| ||||||||||| ||||| || |||||| || Sbjct 646 CGCGTCGCCGAGCGCCCGCAGCACATGCTCATGCGCGTCGCTATCGGCATCCACGGCAAC 705 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 || | || || | | | | || ||||| || ||| | ||| ||| Sbjct 706 AACGTCACGCGTGCGATCGAGACGTACAACTACATGTCCGAAAAGTACTTCACCCATGCC 765 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | || ||||| ||||| || || || || || ||| | | || || ||||| || Sbjct 766 TCGCCCACCCTCTTCAATGCTGGCACGCCCCACCCCCAGCTTGCGTCTTGCTTCCTCGTG 825 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 ||| |||| |||||| ||| || || | ||||| ||| ||| || || | ||| Sbjct 826 GCGATGAAGGACGACTCGATCGAGGGCATCTACGACACCCTGAAGACGTGCGCCATGATC 885 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||| || || ||||| || | ||| || | |||||| || |||| Sbjct 886 TCCAAGACCGCCGGCGGTATCGGCCTCCACATTCACAACATCCGTGCCTCCGGAAGCTAC 945 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| | || || || || ||| |||||| |||| || |||||||| |||||||||||| Sbjct 946 ATCGGTGGCACAAACGGATACTCGAACGGCATCGTGCCCATGCTCCGCGTCTTCAACAAC 1005 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || ||||| || ||||||||||| | | | |||| | ||||| |||| || Sbjct 1006 ACTGCCCGCTATGTCGACCAGGGTGGGAACAAGCGCCCGGGTGCGTTCGCCATCTACCTT 1065 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||| |||||| | ||| | || | |||| || || ||||| || ||||| || Sbjct 1066 GAGCCGTGGCACCCCGACATCTTTGCCTGGCTCGATCTCCGCAAGAATCATGGCAAGGA 1124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493009707644680