Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_011289.1 Length=58578 Score E Sequences producing significant alignments: (Bits) Value seq232712 197 5e-46 >seq232712 Length=770 Score = 197 bits (218), Expect = 5e-46 Identities = 174/216 (81%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 45660 CATCAACCAGCTGCGGCCGGGCGTCGTAGTCATCGAAAACGTGAGGGGGTTGCTGAGTGC 45719 ||||| ||| || || ||| || ||| ||||||||||| || |||||| |||| ||||| Sbjct 215 CATCACCCACCTCCGACCGCGCTACGTGGTCATCGAAAATGTCAGGGGGCTGCTCAGTGC 156 Query 45720 AAAAGCCAATCGCGCAATGGAATCCGCAGAGACAACTG---TGGGAGACGGGGCAGATGG 45776 |||| ||||| || ||||||||| || | | || |||||||| | | | Sbjct 155 CCGAGCCCATCGCCCAGTGGAATCCG---AGTCGAATGGTCTGGGAGACCACGACTCTCG 99 Query 45777 ACCTGTTCTCCGGGCACTCGGAGCCGTACTCGGAGACCTTGCCGACATCGGGTATGACGC 45836 |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 98 ACCTGTTCTCCGAGCACTCGGAGCCGTACTCGGAGACCTTTCCGACATCGGGTATGACGC 39 Query 45837 GCAGTGGGTCACTGTTGCCGCTGCCGACGTCGGCGC 45872 |||||||||||||||| |||| ||| ||||| ||| Sbjct 38 GCAGTGGGTCACTGTTCCCGCCTCCGCCGTCGACGC 3 Score = 116 bits (128), Expect = 1e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 45363 CATGAAAATCGGCTCGTTGTTCTCTGGTGCTGGCGGCCTCGACATCGCTGTTGAGCAGTT 45422 ||||| ||||| || | ||||| || |||||||||||| |||| |||| ||| Sbjct 456 CATGAGGATCGGATCACTCTTCTCGGGGTACGGCGGCCTCGACCTCGCGTGTGAGGCGTT 397 Query 45423 CTTCGGTGCCCGCACCGTTTGGCACTGTGAGCTGAACCCGGACGCCTCGAAGGTGCTCGC 45482 ||||||||| |||| |||||| || | |||| | || ||| | | ||||| Sbjct 396 CTTCGGTGCGACGACCGCATGGCACGCCGACATCGACCCTGCTGCGTCGCGGATCCTCGC 337 Query 45483 GCACCGCTGGCCCGGTGTGCCGAACCTCGGTGACATCACCGCTGTCGACTGGTCGACCGT 45542 |||| |||||| |||||||||| ||| ||||||||||| |||||||| | | || Sbjct 336 CCACCACTGGCCGACCGTGCCGAACCACGGCGACATCACCGCCATCGACTGGACTGCGGT 277 Query 45543 CGAACCCGTCGACATTCTCGCGGGCGGATTCCCG 45576 |||||| || ||| | || | ||||| |||||| Sbjct 276 CGAACCAGTGGACGTGATCACCGGCGGGTTCCCG 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 186711623324840