Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq92975 95.1 9e-15 seq103797 86.0 5e-12 seq243710 84.2 2e-11 >seq92975 Length=1215 Score = 95.1 bits (104), Expect = 9e-15 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 118174 GTTTTCCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCA 118233 |||| ||||| ||||| |||| ||| | || || ||||| || ||||| || | |||| Sbjct 66 GTTTACCGTCACGACCCGCCCGTCCAGTTTCCTGGTAATAGCCTTCCAGGGAGCTCGGCA 125 Query 118234 TACTGTGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCG 118293 |||||| | || || |||||||| | ||| ||||||||||| ||||| || |||| Sbjct 126 AGGAGTGATGCACTACGAATCGCACGTCCGCTTTGTCGATGCCCATACCGAATGCGATCG 185 Query 118294 TCGAACATATCACTCGG 118310 ||| ||| || ||| || Sbjct 186 TCGCACAAATGACTTGG 202 >seq103797 Length=816 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 58546 GAGGCGGTGCACATCGACGCATACTCTCATCTAATAGAGACGCTCGGCATGCCCGAGAGC 58605 ||| |||| ||||||| ||| ||| ||||| | || || ||||||||||||||||| Sbjct 539 GAGACGGTCCACATCGCCGCCTACAGCCATCTGCTCGACACCATCGGCATGCCCGAGAGC 480 Query 58606 ACCTACCGCGAGTTCCTGGAGTACCACGAGATGAAGGAGAAACAAGACTACATCAAGAAG 58665 ||| ||| ||||| || || |||||||||||| || || || ||||| ||||| Sbjct 479 GAGTACGGCGCCTTCCTCGAATATGCCGAGATGAAGGAAAAGCATGATTACATGCAGAAG 420 Query 58666 TT 58667 || Sbjct 419 TT 418 >seq243710 Length=365 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525 ||||| | || ||| | || |||||||||| || || || |||| ||||| ||||| Sbjct 253 TGGGTACGTGACCACCGAGTCCACCACAAGTTATCGGAAACTTCGGCGGACCCTCACAAT 312 Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGA 108571 || || | ||||||| |||||||| ||||| ||||||||||||| Sbjct 313 GCTCACCGTGGGTTCTTTTTCTCGCATGTGGGGTGGCTCATGATGA 358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380483572700952