Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq13366 248 8e-61 seq10526 242 3e-59 seq41046 122 8e-23 seq27511 120 3e-22 seq28654 118 1e-21 seq76306 116 3e-21 seq27512 91.5 1e-13 >seq13366 Length=6323 Score = 248 bits (274), Expect = 8e-61 Identities = 1133/1790 (63%), Gaps = 15/1790 (1%) Strand=Plus/Minus Query 122899 AGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCG 122958 |||| || ||| | |||||| ||||| ||| | ||| | |||||| | || || | Sbjct 2278 AGGTGGCTGAAAGGCCTCAACACATGCTTATGAGAGTCTCCATAGGCATTCATGGTGAAG 2219 Query 122959 ACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGA 123018 |||| || | || | | | ||||| || ||||||| | |||| ||| || || || | Sbjct 2218 ACATTGATAGTGCAATCAATACTTATAATATGATGTCAGAGAAATATTTTACACATGCAA 2159 Query 123019 GTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCA 123078 | || || ||||| |||| | ||| | ||| ||| | || || ||||| | | Sbjct 2158 GCCCTACACTGTTCTCCGCAGCCACACCGCGGCCACAGCTTTCCTCCTGTTTCCTTATAG 2099 Query 123079 CCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTT 123138 | || || || ||||| ||||| | ||| ||||| | || || || |||| Sbjct 2098 CTATGAAAGACGATAGCATTGAAGGTATTTTTGATACTTTAAAACAATGTGCATTAATTT 2039 Query 123139 CCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTA--AGAGGCCGCGGAAGCCG 123196 | |||| || || |||||||| | || | ||| | | |||| | || Sbjct 2038 CTAAATCTGCTGGTGGCATAGGTTT--ACATACACATTGCATCAGAGCTCAGGGTTCTTA 1981 Query 123197 CATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAA 123256 ||| |||| | || || | || || | | ||| || |||| || || || Sbjct 1980 CATAGCTGGCACTAATGGGGTCTCAAATGGTCTAGTGCCAATGTTGAGAGTGTATAACAA 1921 Query 123257 CGCCGTGCGGCACGTCGACCAGGGCGG---CAAACGCAAAGGCGCGATGGCGATCTATCT 123313 | | | | || || || || || |||||| ||||| | || || ||| | Sbjct 1920 TACTGCCAGATATGTAGATCAAGGTGGAAACAAACGTCCCGGCGCATTTGCAATTTATTT 1861 Query 123314 AGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGA 123373 ||| || ||||| | ||| | | || || || ||||||| |||| || ||| Sbjct 1860 AGAGCCTTGGCATGCGGATATATTTGAATTCTTGGATTTAAAGAAGAACACAGGTAAGGA 1801 Query 123374 AGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACG 123433 ||||| || ||| | || |||| || ||||||||| |||| ||| |||||||| | | Sbjct 1800 AGAAATGAGAGCTAGAGAACTGTTTTATGCTTTATGGATACCAGATCTGTTTATGAAAAG 1741 Query 123434 CGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGA 123493 ||| || | || | || ||| ||||||||||| || ||||| ||| | || Sbjct 1740 AGTAGAAAAGGATGAAGTTTGGAGTCTCATGTGTCCTCATGATTGTCCTGGCCTCGCTGA 1681 Query 123494 CGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAGGT 123553 | | || | | ||||| || | || || |||| || |||| |||| | Sbjct 1680 CTGCTTTGGAGAGGAATTTGAAGAACTATATGCCAAATATGAA---GAAGAAAAACGATT 1624 Query 123554 TAGT---CAGGTTCCGGCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTCGAAAC 123610 || || || || | || || | || | ||||| ||| | ||||| || || Sbjct 1623 TATAAAACAAGTCAGAGCTCAAGAGTTATGGAAGTCAATTATAGAAGCCCAAGTGGAGAC 1564 Query 123611 CGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTT 123670 || || || |||||| | || || || || || ||||| || | ||||| | || | Sbjct 1563 TGGTACACCATACATGTTGTATAAGGATGCTTGTAACAGAAAGAGTAATCAAAAAAATCT 1504 Query 123671 GGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGATCA 123730 || || || |||||||| ||||||||| | || || | |||||| | ||| | Sbjct 1503 TGGCACTATTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACTTCAGAAGATGA 1444 Query 123731 AGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGTCGAAAACGGCGCTTT 123790 |||||| ||||| || | ||||| || | || | || ||||| | || Sbjct 1443 AGTGGCAGTGTGCAACCTTGCTTCCATAGCACTTAACATGTTTGTTGAAAATAACAGATT 1384 Query 123791 TAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGAACAAAATTAT 123850 |||||| ||| | ||| || ||||| | |||| | ||||| |||||| |||| Sbjct 1383 TAATTTTAAAAAATTAAAAGAAATCACAAAGATTGTAACTCAAAATTTAAACAAAGTTAT 1324 Query 123851 CGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGACCGGT 123910 |||||||||||||||||| | || || || ||| ||| ||| ||||| | Sbjct 1323 TGATGTTAATTTTTATCCTGTCCCTGAGGCAAAAACTTCAAATATGAGACATAGACCTAT 1264 Query 123911 CGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAAG 123970 || | || |||| || |||| || |||||||| || || | || | |||||||| Sbjct 1263 TGGTATTGGTGTTCAGGGCATGGCAGATGCGTTTGTGTTGATGAGAATATCTTACGAAAG 1204 Query 123971 CGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGA 124030 || |||||| | || ||| |||||| |||||||||||||| || || || || Sbjct 1203 TGAGAAAGCAATACTTCTCAATCAACAAATATTTGAAACAATTTATTATGGTGCATTAGA 1144 Query 124031 GGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGC 124090 || || || ||| | || ||| | || || ||| | || || || || || Sbjct 1143 AGCTAGTTGTGAATTAGCTGAAAAAGAAGGTGCATACAGCACATATCAAGGGAGTCCAGC 1084 Query 124091 GAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTG 124150 |||| |||||| | ||||| || |||||| | || || ||| | | |||||||| Sbjct 1083 AAGCCAAGGTATCCTCCAGTATGATATGTGGGACAAAACTCCTACAGACCTTTGGGACTG 1024 Query 124151 GAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTA 124210 | || | ||| || ||| | | || |||||||| || || || ||| | || Sbjct 1023 GGCTGTCCTTAAAGAAAAGATAGCAAAACATGGTTTGCGCAATTCTCTATTGATAGCTCC 964 Query 124211 CATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCAC 124270 |||||||| || | ||||| |||||| | || |||| ||||| || || || || || Sbjct 963 TATGCCGACTGCCTCTACTGCACAAATTCTTGGCAACACTGAATCTTTTGAACCCTTTAC 904 Query 124271 TAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATCATCATTT 124330 ||| | ||| || |||| ||| | || || |||| || | || |||||| | Sbjct 903 ATCAAATATTTACCAAAGAAGAGTCTTATCTGGAGAATTTCCTGTAGTGAACCATCATCT 844 Query 124331 GGTGGACGACTTG-GTGGCGTTAAATTTGTACGATGAAAACATGCGCAACGAAATTATTG 124389 || || ||| | | | | |||||| |||||| | ||| || ||||| Sbjct 843 TCTGACTGATTTGACTCGGGCT-GATTTGTGGGATGAAGATATGAAAAATCTTATTATAT 785 Query 124390 CGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATTCCGGAACACGTCAAGCAACTGTACA 124449 | ||| | || || | ||||| || | | | | |||||| Sbjct 784 ACAACAATGGATCTATACAAGAAATTGAAAAAATTCCTAAAGAAATAAGAGATTTGTACA 725 Query 124450 AAACCGTGTGGGAAATGAAAAATAAACGATTAATTGAAATGGCCGTCGACCGAGGCGCGT 124509 ||||||| ||||| || | ||| || || | ||||| | || |||| || | Sbjct 724 AAACCGTATGGGAGATTTCACTGAAAACATCCATACAGATGGCAGCTGATAGAGGAGCTT 665 Query 124510 ACACGGATCAAAGTCAATCTTTTAACGTGTTTGTAGCGGAACCCACCTACGCCCGCATGA 124569 | || |||||||||||||||||| | ||| || |||| | ||| | | | Sbjct 664 TTATAGACCAAAGTCAATCTTTTAACATACATGTTGCTAAACCTAACTATGGAAAACTTA 605 Query 124570 CCAGCATACACATGCACGCGTGGAGCAGCGGACTCAAAACGGGCATGTATTACTTAAGAA 124629 | || || | ||||| |||| | ||| | ||||| || ||||| |||||| | | Sbjct 604 CGTCGATTCATTTCCACGCTTGGAAAATGGGATTAAAAACAGGAATGTACTACTTACGCA 545 Query 124630 CCAAACCGGCGGCCGATGCCATTCAATTTACCGTCGACAAATCTAAACTA 124679 | ||||| || || |||| ||||| ||||| || |||||| |||| || Sbjct 544 CAAAACCAGCAGCAAATGCTATTCAGTTTACTGTAGACAAAGGTAAAATA 495 >seq10526 Length=5062 Score = 242 bits (268), Expect = 3e-59 Identities = 603/902 (67%), Gaps = 35/902 (4%) Strand=Plus/Plus Query 50155 TGTAATCAACTACGCCGTCTTCCCAAGTGCCTGCCGCCGGGCCGGTGGCGATTCCCGTAA 50214 |||| ||||| || ||||||| |||||| ||| | || || || ||| | || || | Sbjct 3166 TGTAGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGA 3225 Query 50215 ACGGATTGTCGTCTTTGTAGCCGGTCACGCCGCGCCAACCCCTGCCGTACATGGCCACGC 50274 | ||| ||| ||||| ||| | ||||| ||| || | || ||||| || || | Sbjct 3226 AGGGAATGTTGTCTTCGTAATCATGAACGCCAGTCCAGCCACGACCATACATAGCAACAC 3285 Query 50275 CTACGATTATTTTGCTCGGCTGCACGTTTTGATCGAG-AAGAACGTTTACCGCAAAATCG 50333 |||| | || || | || | ||| || | || ||| | ||||| |||| || Sbjct 3286 CTACTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTAT-TTTACTCCAAAGTCA 3344 Query 50334 GTCGTGTACTTTTCGTCGGTGTTCCATGCGGGCGCATACAAAGGCGTCTGATGTCCCAAA 50393 | ||||| |||| | || ||||| || ||||| ||||| ||||| |||||||| | | Sbjct 3345 GATGTGTAAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTTTGATGTCCAAGA 3404 Query 50394 TCGACGGTGGACCAAGCGCCTTTAAAATCGTAACTCATTAAAAATATTTTATCTAAATAA 50453 | | ||||| || || || || ||||||||||| || || || | ||| | |||| Sbjct 3405 GTATCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAA 3464 Query 50454 TTTTGAGCGTCGCCGTAATTGACAAGGGCGATTTTATCGTAACCTGCGCTAACGGCGCTC 50513 |||||||| | || || | |||| ||||||||| | || ||||||| || Sbjct 3465 TTTTGAGCCTTACCATAGTCAACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAA 3524 Query 50514 GTCAATTCGAATTCGCGGCCGGTGACGCGTTGAAGA----TCGTCCAGCATGTCGCGCAG 50569 || |||||| ||| || | | | | ||| || || ||||| || || | Sbjct 3525 GTTAATTCGTATTTCTTACCATT----CTTAGCAGAGAGCTCATCGAGCATCTCACGTAA 3580 Query 50570 ATCGCGAAGCAGCACAACGTACGTGAGT----CCGTCTTTGTGAGGATCGCCGACTGCGG 50625 || | || ||| ||| | | || |||| || || | |||| | | Sbjct 3581 TTCTTTCATCA----AACTTACATAACAATCACCATCTTC-TG-GGCTA-CCGAGGTCAG 3633 Query 50626 GATTGGCGCCGTTGCCGCCGGGAAACTCCCAATCGATGTCGACGCCGTCGAAAAACTTCC 50685 | || || || ||||| || || |||||||||||||| || || || ||||| || |||| Sbjct 3634 GGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCC 3693 Query 50686 AAGTCAGCAGAAACTCGCGTACCGATTCCACAAAAACGGCTCGTTTT-TCCGCGTCGTG- 50743 | || || |||||||| ||| || | |||||| |||| || || | || Sbjct 3694 ATGTTAGAAGAAACTCCTTTACTGACTGCACAAA------TCGTGTTCTCTTAGATTTGT 3747 Query 50744 CATGTGAAAA----AATGGATCGGACAACGTCCATCCGCCTATAGACGGTAACACCTTGA 50799 || | |||| || ||||||| | |||||| || || ||||| || | | ||| | Sbjct 3748 CAACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCA 3807 Query 50800 GGTGCGGGTTGGCtttttttATCGCCATCAGTTGACCGAAATTTCCTTTGTACGGTTCGT 50859 | ||| ||||| ||||| | ||| | ||| || || || |||||||| || |||| Sbjct 3808 ATTCAGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGT 3867 Query 50860 TCCAAGCCGAGACGCCCTTTTGTGGTTTCTGTACCGCAGCCCACGGGTCGTGAATGGACA 50919 |||| | || | || ||||||||||| |||| || ||||| || ||||| || || | Sbjct 3868 TCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGA 3927 Query 50920 CTTTAAAATCGGCTCGGCCGGCGCACGAACGCTGCAGCGCCTCGAAACTGCCCGTGA-CG 50978 |||| || || | |||||| || || ||||| || || | ||||||||| || | Sbjct 3928 CTTTGAAGTCCTCACGGCCGCTACAGGATCGCTGTAGTGCTTGGAAACTGCCTTCGATCT 3987 Query 50979 GTTTTCAACGCGTCGTTGACGCCTTCGCCGCCGCAAATCGGCACGAAACCGTACAGCAAA 51038 |||| ||| || || | ||| || ||||||||||| || | || ||||| |||||| Sbjct 3988 CTTTTAAAC-TATCATTAATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAA 4046 Query 51039 TG 51040 || Sbjct 4047 TG 4048 >seq41046 Length=7774 Score = 122 bits (134), Expect = 8e-23 Identities = 180/251 (72%), Gaps = 7/251 (3%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 |||||||| || | | ||| ||||||| || ||||||||||| || || || || | Sbjct 7155 CCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCA--G 7212 Query 45174 ACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 || | | | ||| || | |||||| || || | ||||| ||||||||||| || | Sbjct 7213 ACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTG 7272 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATC-GCTTCTACGGTGTCGGAAGACTCG 45290 |||| ||||| |||||||| ||||| ||| | | ||||| || || || | ||| Sbjct 7273 GAATACCTTCCTTATCTTGGATTTTAGCTTTTAACATTTTCTATAGTATCAGAGGCCTCC 7332 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC-- 45348 || ||||| |||| ||||| || || || || || || ||||||||||| | | ||| Sbjct 7333 ACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTGAGACTG 7392 Query 45349 CAATTTAATAA 45359 ||| |||||| Sbjct 7393 TAATATAATAA 7403 >seq27511 Length=800 Score = 120 bits (132), Expect = 3e-22 Identities = 167/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || | || | || ||| | |||| || |||||||| || ||||||||||| Sbjct 446 ATTCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTCTGAATATTATAATC- 388 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 |||| | | | ||| |||| ||||||||||| | || | | || ||||| | Sbjct 387 -TGACAATGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAG 329 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | |||||||||||||| |||||||| ||| || | ||||| || || |||| | Sbjct 328 GAGGAATGCCTTCTTTGTCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTT 269 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| | ||| | |||||||| || || || ||||||||||||||||| Sbjct 268 CCACTTCCAAAGTGATAGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 217 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || | |||| || || || |||| ||||||||||| || ||||| || || Sbjct 674 ATTCCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCA 615 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 || || | | ||| || | || ||||| || | || | || |||||| || | Sbjct 614 --GATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTG 557 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||| || |||||||| |||||||| || | ||| | || || |||| | Sbjct 556 GGGGAATACCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTT 497 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| | ||| | || ||||| || || || ||||||||||||||||| Sbjct 496 CCACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 445 >seq28654 Length=3315 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || || || | ||| || | || || || ||||| ||||| |||||||| || Sbjct 2385 ATTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCA 2444 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || || |||||||| ||||| ||| | ||||| ||||| || || || Sbjct 2445 GAAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGA 2504 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||||||||| || ||||||||||| ||| | ||| | || ||||||| || Sbjct 2505 GGAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCA 2564 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | ||||| ||||| || || || ||||| ||||| || ||||| Sbjct 2565 ACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 2614 Score = 111 bits (122), Expect = 1e-19 Identities = 159/222 (72%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189 |||| |||| || ||||| |||||||| || || || ||| || | || ||| | Sbjct 1950 ACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCA--GACAGTGTACGACCATCTT 2007 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 | ||||| || || || | || | ||||| || ||||| |||||||||||||| |||| Sbjct 2008 CTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCTT 2067 Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 | ||||| ||| | ||| | ||||| |||| || ||||| | ||||| |||| Sbjct 2068 GGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGTTT 2127 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGACCAA 45351 | || || || ||||| ||||| |||||||| ||| || || Sbjct 2128 TTCCAGTGAGTGTTTTAACAAAGATTTGCATACCGCCACGAA 2169 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | || |||||||| || || || ||||||||||| || || || Sbjct 1701 ATACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCA 1760 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| | ||| |||||||| || || || | || | || ||||| || || Sbjct 1761 GAGAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGT 1820 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || ||||| ||||| ||||| ||||| ||| | ||| | || || || | || Sbjct 1821 GGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCC 1880 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || |||| || || || ||||| ||||| |||||||| ||||| Sbjct 1881 ACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| ||||| | | || | || || || || || || |||||||| || || Sbjct 1017 ATACCTCCTCGGAGACGGAGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCA 1076 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| |||| |||||| || ||| | || | ||||| || || || Sbjct 1077 GACAGGGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGA 1136 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||| ||||||||||| || ||| | ||| | |||||| || | ||| Sbjct 1137 GGAATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCA 1196 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | ||| | ||||| || || || ||||| ||||| |||||||| Sbjct 1197 ACTTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCAT 1246 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || |||| ||| |||| ||| || || ||||||||||| ||||||||||| Sbjct 2157 ATACCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCA 2216 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || ||| |||| ||||||||| || | || | | || || || || Sbjct 2217 GATAATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGG 2276 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| || ||||| ||||| || ||| || | ||| | |||||||| | ||| Sbjct 2277 GGAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCT 2336 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||| | ||||| || || ||||| || ||||| || ||||| Sbjct 2337 ACCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 2386 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | || |||| ||| || || || || |||||||| || || || Sbjct 1473 ATACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCA 1532 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| || | || || || || | || | ||||| || || || Sbjct 1533 GACAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGG 1592 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| || |||||||||||||| || || | ||| | |||||| || | ||| Sbjct 1593 GGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCC 1652 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | || ||||| ||||| || || ||||| |||||||| Sbjct 1653 ACCTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 1702 >seq76306 Length=316 Score = 116 bits (128), Expect = 3e-21 Identities = 166/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || | || | ||| |||| |||| || |||||||| ||||||||||| || Sbjct 286 ATTCCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTC- 228 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 |||| | | | ||| |||| ||| ||||| ||| | |||| || ||| || || | Sbjct 227 -TGACAATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTG 169 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||||||||| || |||||||| ||| || | ||| | || || |||| | Sbjct 168 GAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTT 109 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| | || | ||||| || |||| ||||||||| || |||||||| Sbjct 108 CCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 57 >seq27512 Length=242 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189 |||| ||| | || ||||| || || ||||| || || ||| || | | ||| | Sbjct 19 ACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTC--TGATAGTGTACGTCCATCCT 76 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 | | || ||||| || | || | | ||| ||||| || ||||||||||| ||||||| Sbjct 77 CAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTATCTT 136 Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 |||||||| || | ||| | ||||| || | ||| ||||| || || | || | Sbjct 137 GAATTTTTGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCT 196 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||| || || || |||||||| |||||||| Sbjct 197 TGCCAGTCAGTGTCTTTACAAATATTTGCAT 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450437669966680