Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq185731 105 2e-18 seq101952 104 6e-18 seq238992 82.4 2e-11 >seq185731 Length=264 Score = 105 bits (116), Expect = 2e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 8878 GCGAAGGAACTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAAT 8937 |||||||| ||||| |||||| | | ||| || ||||| || || || | |||| | Sbjct 32 GCGAAGGAGCTCGAGGTTCCGGTGGTGGCGATGAGCCAGCTGAACCGTGGTCCCGAGCAG 91 Query 8938 CGCCCAAACAAGCGGCCCGTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGAT 8997 ||| | ||||| ||| | ||||||| ||||| ||||| || ||||||||||||| Sbjct 92 CGCACCGACAAGAAGCCGATGCTGTCCGACCTGCGTGAGTCCGGCTCGATCGAGCAGGAC 151 Query 8998 GCCGACGTGATCCTCTTTATCTACCGCGATGAGGTCTATAACCCCGACAGCGCAGATCGC 9057 ||||||| | ||| | || ||||| || |||| | ||||| | || | | | Sbjct 152 TCCGACGTCGTGCTCCTCGTCCACCGCCCCGATCTCTACGAGCCCGAGACCGAACGTGCC 211 Query 9058 GGTACGGCCGAAATCATCATTGCGAAGCAGCGAAACGGGCCGATTGGCACCGT 9110 || |||||| | ||||| || ||||| || ||||| || | | |||||| Sbjct 212 GGCGAGGCCGACCTGATCATCGCCAAGCACCGTAACGGCCCCACCGCCACCGT 264 >seq101952 Length=1540 Score = 104 bits (114), Expect = 6e-18 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 8878 GCGAAGGAACTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAAT 8937 || ||||| ||||| | |||||| ||||||| || ||||| || || || | ||||| Sbjct 844 GCCAAGGAGCTCGAGATCCCGATCGTCGCGCTCTCCCAGCTCAACCGTGGCCCCGAGACC 785 Query 8938 CGCCCAAACAAGCGGCCCGTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGAT 8997 ||| | ||||||| ||| | ||| |||| ||||||||||| || || | |||||||| Sbjct 784 CGCGCCGACAAGCGCCCCATGATGGCCGACCTGCGCGAGTCCGGCTCGCTGGAGCAGGAC 725 Query 8998 GCCGACGTGATCCTCTTTATCTACCGCGATGA 9029 |||||| | ||| || | | ||||||| || Sbjct 724 GCCGACATCATCATCCTGCTGCACCGCGAGGA 693 >seq238992 Length=528 Score = 82.4 bits (90), Expect = 2e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 8902 ATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCATG 8961 || ||| || ||||||| | || | | ||||| || || ||||||||||| | Sbjct 246 ATGGCGGTGGCGCAGCTCAGCCGCGACGTTGAGAAGCGTCCGGACAAGCGGCCCATGCCA 187 Query 8962 TCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCTAC 9021 ||||| || || || || |||||||||||| ||||||||||||||||| ||||| Sbjct 186 TCCGACCTCCGTGACAGCGGCCAGATCGAGCAGGACGCCGACGTGATCCTCTTCGTCTAC 127 Query 9022 CGCGATGAGG 9031 ||||| |||| Sbjct 126 CGCGAGGAGG 117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127125928979868