Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_013650.1 Length=155445 Score E Sequences producing significant alignments: (Bits) Value seq4597 509 2e-139 seq54171 132 5e-26 >seq4597 Length=157418 Score = 509 bits (564), Expect = 2e-139 Identities = 691/944 (73%), Gaps = 46/944 (5%) Strand=Plus/Minus Query 48335 CGCCAAGGCATCCGACGACTACGTGGCCGACATTGTCGAGGCCAAGCAGCGCATGGGCGG 48394 ||||||||| |||| ||| ||||| || || |||| || ||||| ||||| | Sbjct 59366 CGCCAAGGCTTCCGGCGAGTACGTCAAGGAGATCGTCGGTGCACAGCAGAAGCTGGGCCG 59307 Query 48395 ACGCAAGCTCAGCGCCCGCGAGAAGC---AG-GCCAAGC-TCGCTCACATCCTGAGCGAC 48449 |||| |||| |||| |||||||| || ||| || ||| | ||| || || | Sbjct 59306 TCGCACTCTCACCGCCAACGAGAAGCGTCAGCGCCTTGCGTCGATGCTCTCC-GA-CGGC 59249 Query 48450 AAGGTCGGCGGCATCCAGCGCCTGGGCCAGTCGATGATCGGCCCGATCCAGCTCCAGCTG 48509 || |||| || |||||||||||||||||||| | ||||| |||||| | |||| Sbjct 59248 GAGC---GCGGTTTCAAGCGCCTGGGCCAGTCGATGGTTGGCCCCATCCAGTTGAAGCTC 59192 Query 48510 CGTTACCAGGGCATCCTGCGTAACGTCCTGCTGGAGGACACGCTGACCCCCGGCGTGCCG 48569 |||||||||||| | |||||||| |||||||| ||| |||| || ||||| ||| Sbjct 59191 CGTTACCAGGGCCTGACCCGTAACGTTCTGCTGGAAGACGCGCTAGAGCCGGGCGTCCCG 59132 Query 48570 ATCCAGTACGACGTGCTGGACGACCTGGGCCAGGCCTACATGCTGCACGGCAATGAGGGC 48629 || |||||||||| || || |||||||||||||| ||| ||| ||| || |||||| Sbjct 59131 GTCGAGTACGACGTACTCGATGACCTGGGCCAGGCGTACCAGCTTCACCAGAACGAGGGC 59072 Query 48630 GAGATCCGCATCACCCCCTTCGAGGGCAAGCG--TATCGAGGTCCAGCTGTTCCGCATCG 48687 || | || |||||||| |||||||||||||| || || | | || |||| |||| Sbjct 59071 GAAGTTCGTATCACCCCGTTCGAGGGCAAGCGCGTACCGCTGCGTACCT--TCCGTATCG 59014 Query 48688 CGAGCTTCCCGCAGATCAAGAAGGAAGACCTGTACTACCTCCGCAGCAACATCGTGGAGT 48747 | ||||||| |||||||||||||||||||||||| || || ||||||||| |||| Sbjct 59013 CCTCCTTCCCGAAGATCAAGAAGGAAGACCTGTACTGGCTGCGTGCCAACATCGTTGAGT 58954 Query 48748 ACACGCAGGACATGACCAAGCAGGCCATCATGCGCCAGGAGGACTCGCGCCTCGTGACGC 48807 || |||||||| | | |||||||| |||||| ||||||||| | | ||| | | Sbjct 58953 ACGCGCAGGACGAGTCGAAGCAGGCGATCATGAAGCAGGAGGACGCTCTCCTGATCAACT 58894 Query 48808 TGCTGGAAGCTGCAGCGGTCTCCTACCGCGTCGTGGACAGCTCGGCTCAGCCGGGCGT-C 48866 | | || ||||| | || || ||| |||||||| || ||| | Sbjct 58893 TCATCGAGGCTGC---GATCACC------------GACTACTCGGCTC-GCGACCCGTAC 58850 Query 48867 GGCGCACTGCC-CAACGAGATCACCATCGCAGGCTCGCA-CCTGATGCCCGATGATCTCT 48924 ||| ||| || || || | || || || ||| || ||||| ||| || | ||| | Sbjct 58849 GGCA-ACTCCCACATCGTG-TCTGCACCG---GCTGGCGTCCTGACGCCGGACGTTCTAT 58795 Query 48925 ACACGGCGGTGACCTACACCGACCAGCGTCAGCTGGACAGCTCGCGCCTGCTGGCGAACC 48984 || ||||| ||| || ||| || |||| | ||| || ||| ||| Sbjct 58794 ACGACGCGGTCGGTGTCACGGATCAGTTGGAGTTGGAGTCCAAGCGTCTCCTGTTCAACA 58735 Query 48985 -CGCAGGAGTACCGCGACCTGTACCGGTGGGACATCAACACGACCGGTTGGGCCTTCAAG 49043 || | ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 58734 ACGTCCGT-TACCGCGACCTGTACCGCTGGGACATCAACACGACCGGTTGGGCCTTCAAG 58676 Query 49044 GACTCGGTGGTCGCTGGTGAGCGCATCGTCCAGTTCGGCGAGTTCCAGATCGGCAAGTCG 49103 ||| || || ||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct 58675 GACCGCGTCGTTGCTGGCGAGAAGATCGTCCAGTTCGGTGAGTTCCAGATCGGCAAGTCC 58616 Query 49104 ATCATCATCCCGCGTGGCACCGTCTACCTGACCCCGGAGCCCGAGTTCCTCGGCGTCTTC 49163 |||||||||||| ||| |||||||||||||||||||| || ||||||||||||||| Sbjct 58615 ATCATCATCCCGAAGAACACGGTCTACCTGACCCCGGAGCCGGAATTCCTCGGCGTCTTC 58556 Query 49164 CCGGTCATGTACTCCCTCGATGTCGAGGAGGACAACAAG---GTGGAGCGGTTCAACAAG 49220 ||||||||||||||||| || ||| || |||||| | || || ||| ||||| Sbjct 58555 CCGGTCATGTACTCCCTGGACGTC---GAAGACAACCCGCGTGTCGAAGACTTCCACAAG 58499 Query 49221 GGCTGGGTCATGGACGAGCTGGTCGGCATGGCCGTGCTCAATCC 49264 |||||||||||||||||| ||||||| |||| | | ||||| || Sbjct 58498 GGCTGGGTCATGGACGAGATGGTCGGTATGGGCATCCTCAACCC 58455 Score = 187 bits (206), Expect = 2e-42 Identities = 316/449 (70%), Gaps = 13/449 (3%) Strand=Plus/Minus Query 34899 CGCCGCCCAGGACGCGGTGGCCGATCGCCTCTACAGCCCGCTGGTGCTGGCCACCCTGGG 34958 ||| |||||| | || || ||||| | || ||||||||| || | || |||| | || Sbjct 65775 CGCGGCCCAGAAGGCTGTAGCCGACAGACTTTACAGCCCGATGATCCTCGCCAAGATCGG 65716 Query 34959 CATCGAGGACATGGGCGACGGCGAGC-CGTGGATTCCTGACC-AGGGCGAGCTCGACGAG 35016 ||| |||| ||||| ||| ||||||| || |||| ||| | |||| | | Sbjct 65715 TTCTCCCGACCTGGGTGACGGT-AGCGCGTGGATCCC-GACCGAGGACCAGCTTGCCACC 65658 Query 35017 GTCCGCGACGACATGCAGTCGCTGCTGGCCGCTGACTTCCGCCTGATGGTGCACAACTTC 35076 || |||| | ||| | | ||||||||| ||| ||| || | ||| || ||| | Sbjct 65657 TTCACCGACCAGATGAACATGGCGCTGGCCGCAGACACCCGTCTTCTCGTGTACCACTAC 65598 Query 35077 GGCCTCAAGGTCGAGAACGTGTTCGGGCGCGAGAGCGTGCCCAACCTCGACGCCGACTAC 35136 || || || |||||| |||||||| |||||| |||||| ||||| |||| | Sbjct 65597 GGTGTCGAGATCGAGAGTGTGTTCGGTCGCGAGTCCGTGCCGCGTTTCGACCAGGACTTC 65538 Query 35137 GACCGCATCGAGCGCAAGCTGCTGCAGGCCTGGGGCATCGGTGAGGCGCTGATCTCCGGC 35196 || ||| | ||| |||| ||||| | | |||||||||||||||||| ||||| ||||| Sbjct 65537 GAGCGCCTAGAGGCCAAGATGCTGGAAGTCTGGGGCATCGGTGAGGCACTGATTTCCGGT 65478 Query 35197 GGCA---CCGGTGGCGCCTACGCCTCCAGCGCGCTCAACCGTGAGTTCGTCACCCAGATC 35253 || | | || | ||| ||||| ||||| || |||||| | |||||| | | |||| || Sbjct 65477 GGAACATCAGGCGACGCATACGCTTCCAGTGCACTCAACAGCGAGTTCCTGAACCAGCTC 65418 Query 35254 ATGACAGGCTTCCAGAACGCTCTCAAGCGCCACATCCG---GCGCCGGTGCGAGGTGGTC 35310 ||| | | |||||| || ||||||||| |||| |||| ||| ||| || || Sbjct 65417 ATGTCGTCGTACCAGAAGTACCTAAAGCGCCACTTCCGCAAGCGC--GTG-GAGCTGATC 65361 Query 35311 GCCGAGGCGCAGGGTCACTATGACTACGA 35339 ||||||| |||| |||| |||||||| Sbjct 65360 GCCGAGGTCCAGGAGCACTTCGACTACGA 65332 Score = 132 bits (146), Expect = 5e-26 Identities = 228/324 (70%), Gaps = 14/324 (4%) Strand=Plus/Minus Query 112933 GCCGAGAACAACATCGGGCTGCGCAACCTGTGGGCGCTGTCCTCGCTGGCCTACGAGCCC 112992 |||||||||||| |||| || |||||||||||||||||| ||| ||||||| || Sbjct 136259 GCCGAGAACAACGTCGGCCTCTCTAACCTGTGGGCGCTGTCCACGCGCGCCTACG---CC 136203 Query 112993 GAGCAGTTCTACAAGAAGCCGCAGCTGGACCCCGGACTGCTTATGCAGTACCG---CGAT 113049 ||| ||||| | ||||||| |||| | |||||| || || | || ||| Sbjct 136202 GAGGGCTTCTATTACAAGCCGCTGCTGCAGTG-GGACTGG--ATCAAGGAACGGGCCGAG 136146 Query 113050 GGCCTGTGGGCCTCTGACGGCTGCATGCTGACCCGGTTCGCCGACTACGTGGTCAACGAC 113109 |||||| ||| | ||||||||||||||| || | || | ||| | | ||| | Sbjct 136145 GGCCTGATCGCCACCGACGGCTGCATGCTGGCCTACATGGCGAAGTACATCCTGGACGGC 136086 Query 113110 CAGGAGGACCTGGCCCGCCAGGA-GTGGGGCGTGCTTCTGCACATCTTCGGCGATC---A 113165 || ||||||| | |||| || || || | || ||| ||||| || | Sbjct 136085 AAGACGGACCTGATCGCCCAGCTCGTCGGTCG-GTACCTCGACACGTTCGGTGAGGGCAA 136027 Query 113166 CTTCTACTCCGAGCTGCACACCTGGCAGTTCATCAACCCGGTCAGCCCCGAGCAGCAGGC 113225 ||||||| ||||||||||||||||||||| |||||||| || ||||| |||| | Sbjct 136026 CTTCTACATGGAGCTGCACACCTGGCAGTTCCTCAACCCGAGCACTCCCGAAGAGCACGA 135967 Query 113226 GCTCAACGCCAAGATGTCCAAGAT 113249 | | |||||||||||||| ||||| Sbjct 135966 GTTGAACGCCAAGATGTCGAAGAT 135943 Score = 127 bits (140), Expect = 2e-24 Identities = 186/258 (72%), Gaps = 4/258 (2%) Strand=Plus/Plus Query 98281 CCTCGGTGATCATCACGTAGGCCGTCAGACCGTCGAGATGGCTGTCGGCGCGGTCGATGC 98340 ||||| || || | ||||| ||||| || ||||| | |||||| || |||||||| | Sbjct 9349 CCTCGTTGTACAGCCCGTAGCAAGTCAGTCCATCGAGGTAGCTGTCTGCCCGGTCGATCC 9408 Query 98341 GTGCGTTGCGCTGGGTGAGGTCGTCGTAGCTGTAGAGCGGGTCGGTGTTGATCACGTAGC 98400 | ||||| | ||||||||| |||||||||||||| | |||| |||||| ||||| Sbjct 9409 GGGCGTTCCTCTGGGTGAGATCGTCGTAGCTGTAAGGGATGTCGTAGTTGATGACGTACT 9468 Query 98401 GGGCCTCCTGCATGTTGAG-CCCGTGGCTCCCGGCGTCGGAGGTCAGGAAGCAGGTGA-G 98458 ||||| ||| | || |||| | | || ||||| || ||||||||| |||| Sbjct 9469 TGGCCTGCTGGAACGACAGTGCCGTCGAT-CCTGCGTCAGACGTCAGGAAGACCGTGATC 9527 Query 98459 GTCTGGATCGGCCTTGAAACGGTCCTGCGCGGCCTGGGACTCCCGGGCGGTCTGTCCGGT 98518 || || || |||||||| |||||| || |||| | || || | || | ||||| Sbjct 9528 TTCCGGTTC-GCCTTGAACGTGTCCTGAGCTTCCTGAGCCTGCCTGCTGGACATCCCGGT 9586 Query 98519 GCCGTAGTGGAGCACGTA 98536 ||||||||| || ||||| Sbjct 9587 GCCGTAGTGCAGGACGTA 9604 Score = 123 bits (136), Expect = 2e-23 Identities = 560/873 (64%), Gaps = 46/873 (5%) Strand=Plus/Minus Query 68344 GTGCGCCACGGCGTCACCACCGACCCGACCAGCCTGCACACCCGGGAGTGGAACATCATC 68403 || || ||||| ||||||||||||||| | | |||| ||| || || ||| |||| | Sbjct 31258 GTCCGTCACGGTGTCACCACCGACCCGTCGACCCTGTTCACGCGTGAATGGTCCATCCTG 31199 Query 68404 GGCCAGCAGGACGTGATGGTCTACCGCATTCGCGATTACCTCGACGCCGACGGCCTGATC 68463 |||||||||||| |||| ||| || ||| | ||| ||||| ||||| |||||| Sbjct 31198 GGCCAGCAGGACTCCATGGCGTACGCGATGCGCAACTACTTCGACAGTGACGGTCTGATC 31139 Query 68464 GGCATGCCGATCTACGACAC---CACGATCGTGCAGGTCAAGGCGTCGGCTGAGGCCGCG 68520 || |||||| |||||| ||| ||| | ||| | |||||| ||| || Sbjct 31138 GGTTCGCCGAT---CGACACGGACACCGTCGCAAACATCACCGGATCGGCTCTGGCAGCA 31082 Query 68521 CTGGTCTGGCTGGTGGACAACAACATCATCCGGGGCTACCGCAACCTCAAGGCCCGGCAG 68580 || | | ||||| |||| ||| ||||| |||| |||| | | | Sbjct 31081 CTCGAAAGCCTGGTCTCTTCCAACGCGATCGTCAGCTACTCGGACCTAAAGGTCAAGAAC 31022 Query 68581 ATCGAGCGCCAGCCCGACGTCATCGAGGTGCGCTACGAGTGGCGTCCGGCCTACCCGCTG 68640 | | | | |||||||| |||||||| |||||| |||||||||| | |||| Sbjct 31021 ACCACGGCATACCCCGACGTGATCGAGGTCAGCTACGCGTGGCGTCCGTCGATCCCGGCC 30962 Query 68641 AACTACATCGTCGTCCGCTACTCCATCGCTCCGGAGACCGGCGACATCACCTCGACCATC 68700 |||||| | |||||||| | | |||| | || |||| || || | | ||||| | Sbjct 30961 AACTACCTGGTCGTCCGGTTCACCAT-GAACC--TGACCTCCGGCAACTTCGCGACCGAC 30905 Query 68701 GAAGGCACCACGAGCTTCTAAGGGCT---CTC-GA--CACAAGT--AAGGAGGTGGCCGT 68752 || | || || | ||||| | | | || |||| | | |||| | Sbjct 30904 ACAGCCGCC-TGATCCGGAAAGGGATTAACACAGAATGACAACTCCGCGTAGGTCTTCCA 30846 Query 68753 CCCATGGAGAGCAAGACCCGGATTGGCGGTTCCGGCTTTACCACGATGACCTTCCGGGGC 68812 || |||| ||| ||||||| | | ||| ||||| || ||| | | ||| |||| Sbjct 30845 CCAGTGGA-AGCGAGACCCGAGTAGCCGGATCCGGTTTCACCGTGTTCCAGTTCAAGGGC 30787 Query 68813 ACGCGGTTGGCCTACCTGCAGACCCTGCAGGACACCCCGCCACAGCCTGTGGCCGGGGCT 68872 | | || |||| |||||||||||||| || ||||| |||||||| ||| Sbjct 30786 AAGACCCTGCTCTACTGCCAGACCCTGCAGGATACGGCGCCAGCCCCTGTGGCACAGGC- 30728 Query 68873 CAGGT---GGTTCAGTCCATCGACGACGAGACC---CCCTCGGAGATCGTGACGGCCATG 68926 ||| ||| ||||| ||| || ||| ||| || || |||||||| ||||| Sbjct 30727 --GGTTCCGGTACAGTCGATC-AC--CGACACCGTACCGTCCGAGATCGTCACGGCTCGC 30673 Query 68927 GCTGTCGGCGCGGGCACCCTGCGCCTGACCTTCTACGAGCTCTGGAACGAGCCCGTGTGG 68986 || ||||| |||||||| |||| |||||| | ||||| ||||| | ||| ||| Sbjct 30672 GCCGTCGGTCCGGGCACCTTGCGTCTGACCATGTACGAAGGCTGGACCCGCAGCGTATGG 30613 Query 68987 TCGCGACTTCCGGGCCTGGAGGGCACCAACAACCTGCTAGAGGTCCTCAAGCGCCAGGTC 69046 | | ||| | || | |||||| | |||| || ||| || || ||||| Sbjct 30612 CAGGAGATGCCGTCGTTCGAAGCTGCCAACACCTTGCTGGACGTCTTCGAGATCCAGGCT 30553 Query 69047 GCGCTGGGCGAGGTCACCTGCCGCAAGCTGATCAAGA----GCC---------CGTCG-- 69091 | || ||| | |||| ||| ||| | ||||||| ||| ||||| Sbjct 30552 GGACTTGGCCCGATCACGTGCAAGAAGATCATCAAGAAGGCGCCCCGCAACGGCGTCGGT 30493 Query 69092 GGCATCACGCGCGCCCGTGTCTACCACGGCTGTGTGCTCACCGACATCGACGAGGGCGAG 69151 ||| || |||| ||| || ||| | |||| |||||||| ||||||||| Sbjct 30492 GGCTTCTATCGCGTGAAGACGTACAACAACTGCAAGATCACTGACATCGATGAGGGCGAG 30433 Query 69152 CAGATCAACATCGGCACGATGACGCTGCCCAAG 69184 ||| ||||||||| || ||| | |||| ||| Sbjct 30432 CAGGTCAACATCGCCAGCATGCTGATGCCGAAG 30400 Score = 122 bits (134), Expect = 9e-23 Identities = 356/543 (66%), Gaps = 35/543 (6%) Strand=Plus/Minus Query 146692 TCTACCGCGCGCACGCCGACCCCTCGCGCACCAACGCCAACTTCGGCTTCTGCATCG-CC 146750 |||| | || ||||||||||| ||||| ||||| ||||||| | ||| | | || Sbjct 121718 TCTATCACGGTCACGCCGACCCTGGCCGCACTAACGCTAACTTCGCAGT-TGCGTTGTCC 121660 Query 146751 CACCTCGAAGACGCTCCG---CCTGATGAGCACGGGTATGTCTGGCCGCACGTGATCATC 146807 ||| | || || || || ||||| ||| |||| | |||||||||||| |||||| Sbjct 121659 CACTTGGAGGATGCGCCAGATCCTGACGAGTACGGCAACTACTGGCCGCACGTCATCATC 121600 Query 146808 GACGTGCTCAAGGTGTGGAAGCCCGAGGACTTTCCCGACCACACCCTGGACTACGTGCAG 146867 ||| | ||||| |||||||| ||||||| || ||| |||| | ||||| | || Sbjct 121599 GACTACATGAAGGTCTGGAAGCCGAAGGACTTCCCGGACAACACAATCAACTACATCAAG 121540 Query 146868 GTCACCGAGGAGCTGGACAACTACCTGACCCGGTTCCCCACCATCGAGAAGATGAGCTAC 146927 ||| || |||||| | ||| |||||| | || |||||| | | || | Sbjct 121539 GTCGAGGAAGAGCTGTCGCTGATCTTGAAGAAGTTCCCGTCGATGGAGAAGTTCACCTTC 121480 Query 146928 GACCAGTTCAACTCGGCGGGCCTGATCAGCCACCAGAAGC-GCAAGTTCAGCAACATCCG 146986 ||||||| ||| ||| | |||| || ||||| | | | |||| | | Sbjct 121479 GACCAGTGGAACAGCGCGTCCATGAT------CCCGAAGCTGGGTGCTGAGCATCCGGCT 121426 Query 146987 CATCCTG-CAGC-AG---ACGTTCACCGAGCAGCAGAACCAGGACAGGTTCGAGAAGTTC 147041 || || |||| || || |||||| || || ||| | | | |||||||||| Sbjct 121425 ATTCGTGTCAGCGAGGTCACTGCCACCGACAAGGTCAATCAGCAGCGCTACGAGAAGTTC 121366 Query 147042 AAGAGCGCGTTGAACCTGGGCTGGGTGCACAGTT---GGAAGGACGACTTCGCCGAGGAC 147098 ||||||||| | |||||||||||||| ||| | | | ||| || || | ||||| Sbjct 121365 AAGAGCGCGATCAACCTGGGCTGGGTCCACTCCTACCGAGATGACTTCTACGACAAGGAC 121306 Query 147099 ---GGCCAGTCGCTGCTGGAGNNNNNNNNNAAGTTCCTCCAGGAGAAGGTCTCCGGCTCC 147155 ||| |||||| ||||| ||||||||| | ||||| ||| Sbjct 121305 AATGGCATCTCGCTGTTGGAGCAGGAGCTTAAGTTCCTCTCCG---AGGTCAACGG---- 121253 Query 147156 AAGATCAAGGTCGACAAGCAGGACATCGGCCCGGTGCAGACTAAGGACCTCGCCGACTGT 147215 |||||||| ||||||||||||||| || || || |||||||| | ||||| Sbjct 121252 -----CAAGGTCGTCAAGCAGGACATCGGACCCGTTACCACCAAGGACCTTTCGGACTGC 121198 Query 147216 GTG 147218 ||| Sbjct 121197 GTG 121195 Score = 114 bits (126), Expect = 1e-20 Identities = 228/325 (70%), Gaps = 12/325 (4%) Strand=Plus/Minus Query 151133 CGACGAGCACCCCAACCCGACGCCGATCGCCATCGTGCTCGATGTCACCGGGTCCAACTA 151192 |||||||||||||||| | || ||||||||| || || |||| || ||||| || | Sbjct 110144 CGACGAGCACCCCAACTCCACCCCGATCGCCGTCCTGTTCGACGTGACCGGTTCGATGGG 110085 Query 151193 CACCGCCGCCGTGG-CCGTGCACGCCAAGCTGC-CGCAGTTGTTCGGTCTGCTGCAGCGC 151250 | | | |||| | || |||| | |||||| |||| | ||| || | || ||| Sbjct 110084 CTCGGT-GCCGCGCACCATGCAGGAGAAGCTGGGCGCACTCCA-CGGCCTCAT-CA-CGC 110029 Query 151251 AAGG-GCCTGATCG-AGGACCCGCAGATTCTCATTGCGGCCACCGGTGATGCCAACAGCG 151308 || | || || |||| |||||| | || | | || | ||||| ||| || || Sbjct 110028 GTGGTGGCTACGCGGAGGATCCGCAGGTCCTGTTCGGCGCGATTGGTGACGCCGACTCCG 109969 Query 151309 ATCGGGTGCCGCTGCAGGTCGGCCAGTTCGAGTCCGACAACCGCATCGACGCCATGATCG 151368 | ||||||||||||||||||||||||||||||||||||||| || |||| | | | Sbjct 109968 ACCGGGTGCCGCTGCAGGTCGGCCAGTTCGAGTCCGACAACAAGATGGACG--AGAACCT 109911 Query 151369 AGGC--CATGTACCTCGAAGGCTTCGGGGGTGGGCAGGCACACGAGACCTACGAGCTCGC 151426 ||| ||| || ||||| ||| || |||||| ||||| ||||||||| || Sbjct 109910 GGGCAACATCCTGCTGGAAGGTGGCGGCGGCGGGCAGAAGTCCGAGAGCTACGAGCTGGC 109851 Query 151427 GGCCTACTTCCTGGCCCGGCACACC 151451 ||| |||||| || | ||||||| Sbjct 109850 GGCGTACTTCATGTCGAAGCACACC 109826 Score = 105 bits (116), Expect = 7e-18 Identities = 148/204 (73%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 82790 CGGATCTGGACTACATCTTCGGCAACGTG---CACTTCCTGAGCCGCTCGCCGTCGGAGG 82846 |||| |||||| |||||||||||||| | || ||| | |||| || ||| ||| Sbjct 17855 CGGACCTGGACAACATCTTCGGCAACATCGCCCAGATCCCG---CGCTTGCAGTCCGAGA 17799 Query 82847 CCTACCCGTACAACCCGATGACCGACATGCTCACCTCCGACCAGTGGGACGAGGTCAAGG 82906 ||||| |||||||||| ||||| | | | || ||||||||||||||||||| Sbjct 17798 CCTACTCGTACAACCCAGCTTCCGACCTATTGCTGCCGGAGCAGTGGGACGAGGTCAAGG 17739 Query 82907 TCAAGGACTCCTGGTACCGCACCCGCATCCGTGAGTTCTTCGCGGC-CTGCTCTGCCGGT 82965 |||||||| | ||||||||| | || ||| | ||||||||||| ||| | |||| Sbjct 17738 TCAAGGACGCGTGGTACCGCGCTCGGATCAAGAACTTCTTCGCGGCACTGAAC-CTCGGT 17680 Query 82966 GGCACCCTCGACGGCATCCGGATG 82989 || || | ||||| || || ||| Sbjct 17679 GGTACGCCGGACGGTATTCGCATG 17656 Score = 93.3 bits (102), Expect = 4e-14 Identities = 215/314 (68%), Gaps = 14/314 (4%) Strand=Plus/Minus Query 34290 GTGCCGCCTCTTCTATGCCACCCACGACCTGGTCCCG-CTGCTCATCGACATCTACTCGA 34348 |||||| ||| ||| |||||| ||||| | || | ||| ||||| ||||||| Sbjct 66360 GTGCCGGATCTACTACCGTACCCACAACCTGATGTCGACGGCTG-TCGACGTCTACTCCC 66302 Query 34349 AGTTCCCGGTCGTGGGCATGGAGTTCGACTCCAAGGACCCGCTG--ATCAAGACGTT-CT 34405 |||||| || |||||||||| || | | ||||||| |||| ||| || |||| || Sbjct 66301 GTTTCCCGATCCAGGGCATGGAGATCAAGTGCAAGGAC--GCTGGCATCCAG-CGTTACT 66245 Query 34406 ACGAGGACCTGTTCTTCGGCGAAGACCTCAACTACCTGGAGTTCCTGCCCGACCAGTTCG 34465 ||||| | ||||| | || | || | | ||| | ||||||| ||| ||| Sbjct 66244 ACGAGCAGTTGTTCAT-GGAGCAGT--TGGAGTACGAGACGTTCCTGATCGATG---TCG 66191 Query 34466 CGCGCGAGTACTTCACCGTCGGTGAGGTCACCTCGCTGGCGCACTTCAACGAGTCACTTG 34525 | |||| |||||||||||| ||||||| | ||| || | |||||| || | Sbjct 66190 GCCAGGAGTTCTTCACCGTCGGCGAGGTCAACATGCTCGCCGCGTGGAACGAGCGTCTGG 66131 Query 34526 GCGTCTGGAGCTCCGAGGAGATCCTTAACCCCGACATGCTGCGTGTCAGCCGGTCGATGT 34585 |||||| || |||| ||||||| || ||||||| ||| ||||| | ||| ||| Sbjct 66130 GCGTCTACGACTACGAGCAGATCCTGAATCCCGACAAGCTCACTGTCACACCGTCTCTGT 66071 Query 34586 TCGTCCAGCGCGAG 34599 ||| | ||| ||| Sbjct 66070 TCGATCCGCGTGAG 66057 >seq54171 Length=260 Score = 132 bits (146), Expect = 5e-26 Identities = 176/242 (73%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 142204 TCTGGCTCAAGGAGGTCCTCGAAGCCGCAGGCCTGGTTTGCCACGTCTACGACGGCGCCT 142263 |||||||| ||||| || || || |||| ||| || ||||| |||||| | Sbjct 8 TCTGGCTCCCCGAGGTGCTGCGCGCAGCGCGCCTCACATGCGACATCTACCCCGGCGCAT 67 Query 142264 ACAACCGGGGCCACGGCGACTTCGGCGAGATCTGGGGCGTGGTGGCTCACCACACCGGCA 142323 | | || ||||||||||||||||| |||||||||| | | | ||||||||||||| Sbjct 68 TCCAGCGCGGCCACGGCGACTTCGGGTCGATCTGGGGCATCCTCGACCACCACACCGGCA 127 Query 142324 GCTTCGGCGAGACACCCAAGGGCATCGCTCAGCACCCCAGTCTGGGCCTGGCCAGTCAGC 142383 ||||||||||||| || || ||||| ||||||| || || ||||| |||| Sbjct 128 GCTTCGGCGAGACGCCGCGCGGTATCGCCGAGCACCCGTCGCTCGGTCTGGCGTCGCAGC 187 Query 142384 TCTATCT-GGGCCGTAACGGCGAGTACACCCTGTGTGGGGTCGGTATCGCCTGGCACGCC 142442 | | || |||| || || ||||| |||||||| ||||| ||||||||||||||| Sbjct 188 TGCACCTCTCGCCG-AAGGGTCGCTACACGCTGTGTGGTGTCGGGATCGCCTGGCACGCC 246 Query 142443 GG 142444 || Sbjct 247 GG 248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495573596655400