Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq266287 105 1e-17
>seq266287
Length=596
Score = 105 bits (116), Expect = 1e-17
Identities = 370/574 (64%), Gaps = 23/574 (4%)
Strand=Plus/Plus
Query 203838 TCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGC 203897
||| ||| ||||||||||| || |||||| |||||| | | | ||||||||||| |
Sbjct 25 TCTGGTCGACCGTGAACTGGATCGCGTTCGCGGCAGCGCGCGTCCGGAGATAGTACATAC 84
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
||||||| || ||||| | ||| | || | |||||| |
Sbjct 85 CGGTCTTGAGTCCCTTTTTCCAAGCATAGAAGTGCATCGNNNNNNNNNNNNNNNNNNNNN 144
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016
||| | | ||| || ||||| || ||||| ||||| | |||| || || ||
Sbjct 145 GGTGGAC---------GTTGAGCGACTGACTCTGGTCAATGAACG-CGCCTCGGTCGGCA 194
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076
|| | | | || | |||||| ||||||||||| || |||||| | ||| | | ||
Sbjct 195 GCAAGGTCAAGAACGACCTTCTGAGAAATCTCCCAGACGGTCTTGTAGACGGCCTTCATG 254
Query 204077 TGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135
||| || | | | | | || || ||| ||||| | || ||| || | | || |
Sbjct 255 TGTGCGGGTATACCGT-TGATGTTCTGGATTGAGCCCTGGTGGGCAATGATCCGGTTCTT 313
Query 204136 CGTCTCCTCCCCCCACATGCC--CAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193
| |||| || |||| | ||| || | || |||||| | ||| ||||| | |
Sbjct 314 CATCTCATCATCCCAGAGGCCGGCATC--GACGAGCTCCTTGAGCAGCCATGGGTTCACG 371
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253
||||| || || |||| || || | || ||| | | |||| ||| | || || ||
Sbjct 372 ATCTGGAACTCGCCGGCCAAGACGCGGCGCGTGTAGATGTTGGACGTGTACGGCTCAAAG 431
Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313
||||||| || | |||||| |||||| || || |||||||| ||||| || ||
Sbjct 432 CACTCGTTGAATCCAAGAATCTGGCTGGTGCTCGCTGTCGGCATGGGCGCCAGAAGGAGC 491
Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCGC-TTCAGAGAGGTCCAGTCGTGCA--TC 204370
|| ||||| | ||| | || || | || | ||||| | | |||||| | ||
Sbjct 492 GAATTGCGGATACCTTTGGCCTGAACGC-GCTCTTTCAGCGTCGCCCAGTCCCAGAGGTC 550
Query 204371 GCACTGGGTTTCACGCCCCACATGTCGAACTGAA 204404
|| || |||||||||||||||| ||||||
Sbjct 551 CGAC--GGCGTCACGCCCCACATGTCATACTGAA 582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 792401150146480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |