Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq266287 105 1e-17 >seq266287 Length=596 Score = 105 bits (116), Expect = 1e-17 Identities = 370/574 (64%), Gaps = 23/574 (4%) Strand=Plus/Plus Query 203838 TCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGC 203897 ||| ||| ||||||||||| || |||||| |||||| | | | ||||||||||| | Sbjct 25 TCTGGTCGACCGTGAACTGGATCGCGTTCGCGGCAGCGCGCGTCCGGAGATAGTACATAC 84 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 ||||||| || ||||| | ||| | || | |||||| | Sbjct 85 CGGTCTTGAGTCCCTTTTTCCAAGCATAGAAGTGCATCGNNNNNNNNNNNNNNNNNNNNN 144 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 ||| | | ||| || ||||| || ||||| ||||| | |||| || || || Sbjct 145 GGTGGAC---------GTTGAGCGACTGACTCTGGTCAATGAACG-CGCCTCGGTCGGCA 194 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076 || | | | || | |||||| ||||||||||| || |||||| | ||| | | || Sbjct 195 GCAAGGTCAAGAACGACCTTCTGAGAAATCTCCCAGACGGTCTTGTAGACGGCCTTCATG 254 Query 204077 TGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135 ||| || | | | | | || || ||| ||||| | || ||| || | | || | Sbjct 255 TGTGCGGGTATACCGT-TGATGTTCTGGATTGAGCCCTGGTGGGCAATGATCCGGTTCTT 313 Query 204136 CGTCTCCTCCCCCCACATGCC--CAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 | |||| || |||| | ||| || | || |||||| | ||| ||||| | | Sbjct 314 CATCTCATCATCCCAGAGGCCGGCATC--GACGAGCTCCTTGAGCAGCCATGGGTTCACG 371 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 ||||| || || |||| || || | || ||| | | |||| ||| | || || || Sbjct 372 ATCTGGAACTCGCCGGCCAAGACGCGGCGCGTGTAGATGTTGGACGTGTACGGCTCAAAG 431 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 ||||||| || | |||||| |||||| || || |||||||| ||||| || || Sbjct 432 CACTCGTTGAATCCAAGAATCTGGCTGGTGCTCGCTGTCGGCATGGGCGCCAGAAGGAGC 491 Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCGC-TTCAGAGAGGTCCAGTCGTGCA--TC 204370 || ||||| | ||| | || || | || | ||||| | | |||||| | || Sbjct 492 GAATTGCGGATACCTTTGGCCTGAACGC-GCTCTTTCAGCGTCGCCCAGTCCCAGAGGTC 550 Query 204371 GCACTGGGTTTCACGCCCCACATGTCGAACTGAA 204404 || || |||||||||||||||| |||||| Sbjct 551 CGAC--GGCGTCACGCCCCACATGTCATACTGAA 582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 792401150146480