Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq10526 159 4e-34
seq76306 98.7 1e-15
seq28654 98.7 1e-15
seq27511 91.5 2e-13
>seq10526
Length=5062
Score = 159 bits (176), Expect = 4e-34
Identities = 633/987 (64%), Gaps = 27/987 (3%)
Strand=Plus/Minus
Query 98734 AAAGTTACGGGGGCTTATTTTGTAGAATGGGGTGTTTACGATCGCAAATTTCCAGCAGAT 98793
|||||| ||| || || || |||||||||||||| || | | ||||| || | |||
Sbjct 4132 AAAGTTGTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGAT 4073
Query 98794 AAAGTGCCTATCCCCAATTTGACACACCTTTTGTATGGTTTTATCCCCATTTGCGGAGGC 98853
| ||||| || ||| | || || | | || || ||||| || |||||||| ||
Sbjct 4072 CGTATACCTATACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGT 4013
Query 98854 GACGGTATAAACGACAGTCTAAAACAAGTGCCGGGATCTTTTGAGACGTTACAAAAATCG 98913
||||| || || || ||| ||||| | | || ||| | | |||| |||
Sbjct 4012 GACGGCATTAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGATCC 3953
Query 98914 TGCGATAAGAGAGATGATTTCAAGGTGAGCATCCACGATATTTACGGTGCTCTACAGAAA 98973
|| | || || ||||| || ||||||||| | | || |||| |||
Sbjct 3952 TGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 3893
Query 98974 CCACAACAGGG--TGTCTCCGATTATAACGAGCCTTACCGTGGCAATTTCGGACAGCTTA 99031
|||||| | || ||||| | | |||||||| ||| ||||| || || || | |
Sbjct 3892 CCACAAAAAGGATTGTCTTCA--TGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAA 3835
Query 99032 TGGCCATACGTAAACA---CAACCCACATCTAAAAATCCTACCCAGTATCGGTGGTTGGA 99088
|| | || ||||| | ||| | | || || || ||| ||| ||||| ||||
Sbjct 3834 TGTCACTA---AAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGA 3778
Query 99089 CTCTTAGCGACCCCTTCTATTTTTTCGCCGATGATTACAAGCGCAAAGTGTTCGTAGACT 99148
| ||| ||| || |||| ||||| | || | | ||| | | | || || | |
Sbjct 3777 CGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAGAGAACACGATTTGTGCAGT 3718
Query 99149 CGGTTCGTGAATTCCTACAGGTGTGGAAATTTTTCGACGGTGTAGACATCGACTGGGAGT 99208
| || || || || | |||||||| ||||| ||||| || ||||| |||||||
Sbjct 3717 CAGTAAAGGAGTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGT 3658
Query 99209 TTCCTGGCGGAAAGGGGGCCAACCCTGAAGTAGGAAATCCTAATGAGGACGGAAACACTT 99268
| ||||| || || || || |||||||| | || | || || || || | ||
Sbjct 3657 TCCCTGGTGGCAAAGGTGCTAACCCTGACCTCGGTAGCCCA---GAAGATGGTGATTGTT 3601
Query 99269 ATGTCACACTTCTGCAAGAGCTTCGTTTGATGCTTGACGAATTGGGTGTGGCCAATAAAC 99328
|||| | | || |||| | ||| |||||| || || | || | || ||
Sbjct 3600 ATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCTCTCTG---CTAAGAATG 3544
Query 99329 GTGTT---TACGAACTGACAAGTGCCGTGGGCGCCGGTTACGATAAAATCGACGTGGTCG 99385
|| |||||| | || ||| | |||| || | ||||||||| | || || |
Sbjct 3543 GTAAGAAATACGAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTTGTTG 3484
Query 99386 ATTACTCTACAGCCAGTCAATATT---TGGACCATGTGTTTTTAATGAGTTACGATTTTA 99442
| || || || |||| ||| |||| ||| | || || ||||||||||| || |
Sbjct 3483 ACTATGGTAAGGC---TCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCA 3427
Query 99443 AAGGCGCCTGGTCCAACACCGACT-TGGGTCATCAAACACCATTGTATGCACCATCGTGG 99501
| || |||||||| || ||| | || |||||||| |||||||| || || |||||
Sbjct 3426 AGGGAGCCTGGTCAAATGAT-ACTCTTGGACATCAAACGCCATTGTACGCGCCTGCGTGG 3368
Query 99502 AACTCCGAAGAGAGATACACAACCGATTATGCGGTTAAACAGCTATTAAAGAAAAAAGTG 99561
|| || | || | |||||| | || | || || ||| | | | | | ||||
Sbjct 3367 AATCCCAAGGAAACTTACACATCTGACTTTGGAGTAAAATACTTGCTGGCGCAGGGAGTG 3308
Query 99562 CCTTCTCACAAGATTGTAGTGGGAGTCGCCATGTACGGCAGAGGATGGAGTGGAGTGCAT 99621
| || | ||||||||||| || || || ||||| || | || |||| ||| || |||
Sbjct 3307 AATCCTAAGAAGATTGTAGTAGGTGTTGCTATGTATGGTCGTGGCTGGACTGGCGTTCAT 3248
Query 99622 GACTACAAAAATAATAACGTTTTTACGGGTGTGGCCACGGGACCGGTAAAAGGCACCTGG 99681
|| ||| || | || | || || || || || ||||| || ||||| || |||
Sbjct 3247 GATTACGAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGG 3188
Query 99682 GAAAACGGTGTTGTTGATTATAGGCAG 99708
|| |||| || ||||| || ||| ||
Sbjct 3187 CAAGACGGAGTGGTTGACTACAGGGAG 3161
>seq76306
Length=316
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || |||| |||||| || | ||||| ||| ||||| |||||||| ||||| ||
Sbjct 283 CCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAC 224
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| |||||| | || || || ||||| |||||||| |||| | || || || | ||
Sbjct 223 AATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 164
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || |||||||| ||||| ||| | | | | || || | ||||||
Sbjct 163 ATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACT 104
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| ||||||||||| || || | ||||| || |||||||||||
Sbjct 103 TCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 57
>seq28654
Length=3315
Score = 98.7 bits (108), Expect = 1e-15
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 46390 ATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTG 46449
|||||| ||| || |||||||| || ||||| || |||||||| | || || | |||
Sbjct 587 ATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTCTAACTG 646
Query 46450 CTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTT 46509
|| || || || || | ||||| ||||| | || | || ||||||||| ||||||
Sbjct 647 TTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTT 706
Query 46510 CTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
||| | | | | |||||| | ||||| |||| |||||||| || || ||
Sbjct 707 AGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGTCTTCCCAGT 766
Query 46570 CAGCGTTTTAACAAAGATTTGCAT 46593
|| || ||||||||||| |||||
Sbjct 767 AAGAGTCTTAACAAAGATCTGCAT 790
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||||| |||||| || |||| ||||| || ||| || || ||||| ||||| ||
Sbjct 792 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTATAGTCAGAG 851
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||| || | || || ||||||||||| ||||| || | || || || || | ||
Sbjct 852 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 911
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | ||| ||||| |||||| || | | | | ||||| | ||| ||
Sbjct 912 ATACCCTCTTTGTCTTGGATCTTAGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 971
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | ||||| ||||| || ||||| || || |||||||| |||||
Sbjct 972 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 1018
>seq27511
Length=800
Score = 91.5 bits (100), Expect = 2e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | |||| ||||| ||||| || ||||| || ||||||||||| |||
Sbjct 671 CCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAGAT 612
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| | || || |||||||| || || || || | | ||||| || | ||
Sbjct 611 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 552
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | ||| || ||| || ||| ||| | | | | || || | ||||||
Sbjct 551 ATACCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 492
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|||| ||||| || ||||| ||||| || || ||||| |||||||||
Sbjct 491 TCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563280675605160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |