Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq10526 230 2e-55
seq28654 113 3e-20
seq27511 100 2e-16
seq76306 98.7 7e-16
>seq10526
Length=5062
Score = 230 bits (254), Expect = 2e-55
Identities = 849/1307 (65%), Gaps = 46/1307 (4%)
Strand=Plus/Plus
Query 5817 TTGCCCAAACCGGTGTTCATTGCATTTAAAAGATCACCGTTGTCCGCGTCTATTTCCCAC 5876
|| || | ||| ||||||| ||||| | || ||||| || || ||||| | ||||||
Sbjct 2931 TTACCGAGACCCATGTTCATGGCATTCAGTAGGTCACCATTATCAGCGTCCACTTCCCAA 2990
Query 5877 GCAAATAAACCACCCAAATTTTTGCTCACTACATACTTACCTTTTGCTACCACCGATTGA 5936
||||| | |||||| | || || | |||||| ||||| ||| | | || ||| |
Sbjct 2991 GCAAAGAGACCACCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACAGATCTA 3050
Query 5937 TCGTTGTCGTACGTAACTAAATCATTATT--ATCGT----AGACGTACGGAGATTGTGCA 5990
| || || || || || | ||| | | || || | || || || | ||| ||
Sbjct 3051 GCATTATCATAGGTTACAAGATCTCCAGTTGATGGTCTGAAAACATAGGGGGCTTGGGCG 3110
Query 5991 ATGTTATCATA---GAATTGTACACTTTCGTCGTACCTATTTA-----CAATATCTTTAT 6042
| || || || ||| | ||||| | | | | | |||| |||| || | |
Sbjct 3111 ACATTGTCGTAATGGAACTCC-CACTTGCCTTG-AGCAATTTCATTCGCAATCTCCCTGT 3168
Query 6043 AATCGATTACGCCGCTTTCCCATGTACCTTTAACGGGAGCGCTAGCTATTCCTGTAAACG 6102
| || | || ||| || ||| || ||||| || || | |||| | ||||| || |
Sbjct 3169 AGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGG 3228
Query 6103 GATTATTGTTTTCG-ACTCGATGCACACCGCTCCAGCCGCGTCCATACATAGCCACACCT 6161
|| | |||| |||| | || ||| || || ||||||| || ||||||||||| ||||||
Sbjct 3229 GAATGTTGTCTTCGTAATC-ATGAACGCCAGTCCAGCCACGACCATACATAGCAACACCT 3287
Query 6162 ACTACTAATTTAGTCGAATCGACATTTTGATTTAACAA-TCTGTTAATAGCAAAATGGGT 6220
||||| | || | | || || || | ||| | | ||| | |||| | |
Sbjct 3288 ACTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTATTTTACTC-CAAAGTCAGA 3346
Query 6221 TGTGTAATTTTCGTTAACGTCCCACGAAGGAGCGTAAAGCGGTGTTTGAAAACCCAAATT 6280
||||||| |||| || | ||||| ||| ||||| | || |||||| || | | |
Sbjct 3347 TGTGTAAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTTTGATGTCCAAGAGT 3406
Query 6281 TTCCATGGACCAAGCGCCTTTAAAATCGTAGGTCATTACAAATATATAATCGAGATAGCG 6340
|| | ||||| || || || || ||||| |||| | || |||| ||| | |||
Sbjct 3407 ATCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATT 3466
Query 6341 TTGCGCGTCTGTATAATCGACAACGTCGATTTTGTCGTAACCGGCACCGATAGCGCTAGT 6400
||| || | ||| || ||||| | |||||| || | || || | ||||| |||
Sbjct 3467 TTGAGCCTTACCATAGTCAACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGT 3526
Query 6401 TAGTTGCAATCGTTTACCTCTCtttttttCCAATTTGTTGAGCATTTCGCGTAACTCCTT 6460
|| || || ||||| |||| | | | |||||| || ||||| || ||
Sbjct 3527 TAATTCGTATTTCTTACCATTCTTAGCAGAGAGCTCATCGAGCATCTCACGTAATTCTTT 3586
Query 6461 TAAAAGTATTGTATATGTTTTGCGATCCACTGAAGCGTTGCCCAGCGACGGGTTGGCACC 6520
| | || ||| | | ||| ||| | | || || ||||| |||||
Sbjct 3587 CATCAAACTTACATAACAATCACCATCTTCTGG---GCTACCGAGGTCAGGGTTAGCACC 3643
Query 6521 TTTACCGCCCGGAAACTCCCAATCTATGTCGACGCCGTCGAAAAATTTCCACGTTTCCAA 6580
||| || || || ||||||||||| || || || || ||||| |||||||| ||| |
Sbjct 3644 TTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAG 3703
Query 6581 AAATTCGCGCACACTATCAACAAA-CGTATTTCGTTTTTCGAC--GTCGTTTAACTGGTA 6637
||| || || | ||||| ||| || | || || ||| ||| | |
Sbjct 3704 AAACTCCTTTACTGACTGCACAAATCGTGTTC---TCTTAGATTTGTCAACTAAAAAGAA 3760
Query 6638 AAACGGATCGCTAAGCGTCCATCCGCCTATCGATGGCAATATTGTTAAATCTGGATTGTG 6697
|| |||||| ||||||||| || || || || || | || | || || || | |
Sbjct 3761 GAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCAGG---GCG 3817
Query 6698 GCGCTTGATC----GCCATTAACTGTCCAAAGTTTCCTTTGTACGGTTCGTTGTAGGCCT 6753
| ||||| | | |||||| || |||||||| |||||||| || ||||| | |
Sbjct 3818 G-GCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAA- 3875
Query 6754 CGACA--CCTTTTTGTGGTTTTTGAAGCGCTCCCCATATATCATGAATGGTTACTTTGAA 6811
|||| ||||||||||||||||| | ||| ||||| ||| || || | ||||||||
Sbjct 3876 -GACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAA 3934
Query 6812 ATCTTTTCGGCCGGCGCACGATTTTTGCAACGCCTC-AAACGAACTGGGTATTTGTTGTT 6870
|| | |||||| || ||| || | || | |||| || | || | || |
Sbjct 3935 GTCCTCACGGCCGCTACAGGATCGCTGTAGTGCTTGGAAACTGCCTTCG-ATCTCTT--T 3991
Query 6871 TAAGCGCATCGTTTACACCATCGCCGCCACAAATTGGTATAAACCCGTACAACAAATGTG 6930
||| | ||| || | || || ||||| |||||||| ||||| ||||| | |||||| |
Sbjct 3992 TAAACT-ATCATTAATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAG 4050
Query 6931 TAAGATTAGGAATGGGAATTTTGTCGGCGGGATATTGTCTATCGTAAACACCCCATTCCA 6990
|||||||||| || || || || |||| ||| ||| || ||||||||||| |
Sbjct 4051 TAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTA 4110
Query 6991 CAAAGTAAGCGCCCACAACATTATCGGTAATTTTTTCGAACGGTACATTGTTTTCCGACC 7050
| ||||| || |||||||| || | | ||| | |||||| ||| ||||| |
Sbjct 4111 CGAAGTAGGCACCCACAACTTTTCCAGATGTTTGCTTGAACGGCTTATTTTTTTCTCCCA 4170
Query 7051 ACATATATTTTATAGGATTTAAATGCGAACCGTCTGTATCGGCCACG 7097
| |||||| | |||| |||||| || || ||||||||||||
Sbjct 4171 ATGTATATTCCAGAGGAGGTAAATGACTTCCATCGGTATCGGCCACG 4217
>seq28654
Length=3315
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||||| |||||| || | ||| ||||||||| |||||||| || |
Sbjct 2388 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAA 2447
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | |||| | || |||||||| || || | ||||| ||||| || ||||| | ||
Sbjct 2448 AGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 2507
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||| ||||| ||||| ||| | | | | || || | ||| ||
Sbjct 2508 ATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACT 2567
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||||||||| ||||||||||| | ||||| || |||||||||||
Sbjct 2568 TCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 2614
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| ||||| ||||| || |||||||| ||||||||| || || || || | |
Sbjct 1932 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAC 1991
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| || |||| || ||||| || || ||||||| | ||| || ||||||| ||
Sbjct 1992 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGA 2051
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||||||||| ||||| ||| | | | | |||||| | ||| ||
Sbjct 2052 ATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 2111
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| |||||||||||||| || || | ||||| || ||||| |||||
Sbjct 2112 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 2158
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||| ||||| ||||||||||| ||||||||| || ||||| || | |
Sbjct 564 CCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGAC 623
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | ||| |||| || || ||||| || |||| || | |||||| || || | |||
Sbjct 624 AGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGA 683
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTA--ATCGTCGCTACTGTGTCTGCGCTTTCCA 39670
| ||| || ||||| || || ||| || ||| || ||||| | ||||
Sbjct 684 ATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATA--GTGTCGGATGGCTCCA 741
Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| |||||||| || || || || || | ||| || || |||||||||||
Sbjct 742 CCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 790
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| ||||| ||||| | |||||| ||||||||| ||||| || |||||||| || |
Sbjct 792 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTATAGTCAGAG 851
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | || |||| |||| || || || | ||||| | ||| || ||||| | |||
Sbjct 852 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 911
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| || |||||||| || || ||||| | | | ||||||| | ||| ||
Sbjct 912 ATACCCTCTTTGTCTTGGATCTTAGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 971
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| || || || ||||| || || | || ||||| |||||||||||
Sbjct 972 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 1018
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| ||||||| ||||||||| | ||| | || || ||||| || || || || |
Sbjct 1704 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAG 1763
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| ||| |||| |||||||| || || |||| || | |||||||||||| | ||
Sbjct 1764 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 1823
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||| |||||||| ||||| ||| | | | | || || | | ||||||
Sbjct 1824 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 1883
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|||| ||||| || || || |||| ||||| || || ||||||||
Sbjct 1884 TCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930
>seq27511
Length=800
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
||||| ||||| |||||||| ||| || || ||||||||||| | ||| ||| ||
Sbjct 431 CGCAGCACCAAGTGCAAAGTAGATTCCTTCTGAATATTATAATCTGACAATGTACGTCCA 372
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| |||| ||||| || ||||||| | | ||| || || | || | ||||||||||
Sbjct 371 TCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGAATGCCTTCTTTG 312
Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684
|| || ||| |||| | ||| ||| || | |||||| |||||||| ||
Sbjct 311 TCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATA 252
Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||| || || | || ||||| || || |||||
Sbjct 251 GTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 217
>seq76306
Length=316
Score = 98.7 bits (108), Expect = 7e-16
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 39504 ACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTC 39563
||||| || || |||||||| ||| || || |||||||| || | ||| ||| |
Sbjct 272 ACGCAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGACAATGTGCGCCC 213
Query 39564 ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTT 39623
||| |||| ||| || ||| | ||||| | | || ||||| | || | |||||| ||
Sbjct 212 ATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTT 153
Query 39624 GTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAAT 39683
||| || ||| || | | | | ||| || | |||||| ||||| || ||
Sbjct 152 GTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGAT 93
Query 39684 TGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
||||| || |||||||||||||||||||| ||||||
Sbjct 92 GGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATG 56
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346196550554939
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |