Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_014458.1 Length=59598 Score E Sequences producing significant alignments: (Bits) Value seq84152 385 2e-102 seq134864 203 1e-47 seq231474 125 3e-24 seq12676 105 3e-18 seq189415 93.3 2e-14 seq20617 89.7 2e-13 seq171065 87.8 7e-13 seq47396 82.4 3e-11 >seq84152 Length=5826 Score = 385 bits (426), Expect = 2e-102 Identities = 568/794 (72%), Gaps = 33/794 (4%) Strand=Plus/Plus Query 53663 GTCGACCTGTCTCACTCCCCGAAGTGGCGGGAGCAGCTCGGCACGCTGGGCGGCGGCAAT 53722 |||||||| ||||| ||||||||| ||||||||||| |||| ||||||||||| Sbjct 4698 GTCGACCTCGGGCACTCGAAGAAGTGGCGTGAGCAGCTCGGGTCGCTCGGCGGCGGCAAC 4757 Query 53723 CACTTCATCGAGCTGTGCCTCGACCACCTCGACCGCGTGTGGTTGTTCCTGCACTCCGGT 53782 |||||||||||||||||||||||| | ||| || |||||| ||||||||||||||||| Sbjct 4758 CACTTCATCGAGCTGTGCCTCGACGAGTCCGATCGGGTGTGGATGTTCCTGCACTCCGGT 4817 Query 53783 TCGCGTGGCGTCGGTAACAAGATCGCGCAGAAGCACATTCAGGCCGCGCAGG-GCTATTG 53841 ||||| || ||||| ||| |||||||||| ||||| | ||||||| ||| | Sbjct 4818 TCGCGGGGTGTCGGCAACCGGATCGCGCAGCGACACATCGCGATCGCGCAGAAGCTG--G 4875 Query 53842 CCTCGCCAATGGGCTGCACGTGCCACACAA---GGATCTGGCGTACCT--CGTC-GAGGG 53895 || | || ||| ||||| | || ||| || |||||||| |||| ||| Sbjct 4876 CCAGG--AAGTGGCACATCGTGCTCCCGAACCCGGACCTCGCGTACCTGCCGTCCGAG-- 4931 Query 53896 CACGGTCGAGTTCGACCGCTACCTCGTTGAATTACGTTGGGCGCAGCGGTTTGCGTACTA 53955 ||| ||| |||| |||||| || | ||||| |||||||| ||| | | Sbjct 4932 -ACGCCGGAGCTCGAGGTGTACCTCCGGGATCTGGCGTGGGCACAGCGGTTCGCGCTCGA 4990 Query 53956 CAACCGCGCCGAAATGATGGACCGATTCGAGCAGGCGTTCCGCCATTGGGTCGGCGCCGA 54015 |||||||| || |||||||| || ||| |||||||||| || ||||| || ||| Sbjct 4991 GAACCGCGCTGAGATGATGGATCGCTTCCGGCAGGCGTTCGCGCACTGGGTAGGTCACGA 5050 Query 54016 CCA-GNNNNNNNNNNNNNNNNNNNNNACC--ATCAACGCGCACCACAACTACAC--GCAG 54070 | | | | |||||| | |||||||||||||| | | Sbjct 5051 CGGTGACCCGGCCGAGCTCGAGACCGAGCGGATCAACACCCACCACAACTACACCGTCCG 5110 Query 54071 AAGGAGCGGCACGGCGACCGTGACGTGTGGTTGACCCGTAAGGGTGCGATCGACGCGAAC 54130 | ||||| ||||||| | ||||||||| ||||||| |||||||||||||||||| || Sbjct 5111 A--GAGCGACACGGCGGCAAGGACGTGTGGCTGACCCGCAAGGGTGCGATCGACGCGCAC 5168 Query 54131 GAGGGTGTGCGGGGCCTGATTCCGGGCTCGATGGGCACCTGTTCGTATGTCGTGACCGGC 54190 ||||||||||||||| | || |||||||||||||| || | || || ||||||||||| Sbjct 5169 GAGGGTGTGCGGGGCATCATCCCGGGCTCGATGGGGACGCGGTCCTACATCGTGACCGGC 5228 Query 54191 AAGGGCAATCCCGAGGCG--TTGTGCTCGGCGCCGCACGGTGCGGGCCGCCGGTTCTCGC 54248 ||||| | | | |||| |||| |||||||||||||| ||||| || |||||||| | Sbjct 5229 AAGGG--ACACGGCGGCGGTCTGTGTTCGGCGCCGCACGGCGCGGGGCGTCGGTTCTCAC 5286 Query 54249 GCACGAAGGCACGCAAG---CTGTTCACGGTCGACGACCTCGAAG-CGCGTATGACGGGC 54304 | | |||| |||| | || ||| | | ||| ||||| | |||| ||||| || Sbjct 5287 GGGCCGAGGC---CAAGCGTCGGTACACCGAGGCCGATCTCGAGGCCGCG-ATGACCGGG 5342 Query 54305 ATCGAGTACCGCAAGGGCGAGGCGTGGGTCGATGAGATTCCCGACGCTTACAAGCCGATC 54364 ||||||||||| | || | || |||| |||| ||||| || | || |||||| ||| Sbjct 5343 ATCGAGTACCGGCACGGGGCGGAGTGGATCGACGAGATCCCGCAGGCGTACAAGAGCATC 5402 Query 54365 GACGTTGTGATGCACGACGCCGAAACGCTGGTGTCGGTGGATGCCGAGCTGCGCCAGCTC 54424 ||||| |||||| ||||||||| || |||||| | || | ||||| ||| | Sbjct 5403 GACGTCGTGATGGCCGACGCCGAGCGCCTCGTGTCGATCGACCACACCCTGCGTCAGGTG 5462 Query 54425 TTGAACGTCAAGGG 54438 | ||||| ||||| Sbjct 5463 CTCAACGTGAAGGG 5476 Score = 149 bits (164), Expect = 2e-31 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 53285 CTGATCAACTTTGCGAGCGAGGTCGACGACCAGACGCTTGCGCAGGCGCAGCAGATCGCC 53344 ||| ||||||| || |||| ||||||| ||||| | | ||||| || ||| ||| Sbjct 4379 CTGCTCAACTTCGCCTCCGAGATCGACGAGAAGACGATCGACCAGGCCAAGGAGACCGCA 4438 Query 53345 GATCTGCCTTTCGTTTATCCGCATGTGGCGCTGATGCCTGATGCGCATTTCGGTAAGGGC 53404 | ||||| ||||| | ||||| |||||| ||||||| |||||||| | ||| ||||| Sbjct 4439 GCGCTGCCCTTCGTGCACCCGCACGTGGCGTTGATGCCGGATGCGCACTACGGCAAGGGA 4498 Query 53405 AGCAGTGTCGGCACGGTGATCCCGACCGAGGGCGCTGTGATCCCGGCGGCCGTCGGCGTC 53464 | ||||| || || |||||||| | | ||| || |||||||| || ||||| ||| Sbjct 4499 TCCGCGGTCGGTACCGTCATCCCGACGGTCGACGCCGTCATCCCGGCCGCGGTCGGGGTC 4558 Query 53465 GATATTGGCTGCGGCATGATCGCAGCCCGCACCAC 53499 || || || |||||||||||||| | ||| ||||| Sbjct 4559 GACATCGGGTGCGGCATGATCGCCGTCCGGACCAC 4593 >seq134864 Length=649 Score = 203 bits (224), Expect = 1e-47 Identities = 433/642 (67%), Gaps = 27/642 (4%) Strand=Plus/Minus Query 53752 CGACCGCGTGTGGTTGTTCCTGCACTCCGGTTCGCGTGGCGTCGGTAACAAGATCGCGCA 53811 || |||| | |||||||||||||||||||| || || || ||||| ||| |||||| || Sbjct 625 CGGCCGCATCTGGTTGTTCCTGCACTCCGGGTCCCGCGGTGTCGGCAACCGGATCGCCCA 566 Query 53812 GAAGCACATTCAGGCCGCGCAG--GGCTATTGCCTCGCCAATGGGCTGCACGTGCCACAC 53869 | | ||||| || || | | | | || | | | ||| ||| | | || || | Sbjct 565 GCACCACATCGGGGTTGCCCGGAAGTCGATGG--TGGACAACGGGATCGAGCTGGCAGAT 508 Query 53870 AAGGATCTGGCGTACCTCGTCGAGGGCACGGTCGAGTTCGACCGCTACCTCGTTGAATTA 53929 ||||| |||||||| || |||||||| | ||||||||| |||||| | || | Sbjct 507 CGCGATCTCGCGTACCTGGTGGAGGGCACCGAGGAGTTCGACGCCTACCTGGCCGAGCTC 448 Query 53930 CGTTGGGCGCAGCGGTTTGC-GTACTACAACCGCGCCGAAATGATGGACCGATTCGAGCA 53988 ||||| |||| ||| || | ||| |||||||| ||| |||||||| || ||| || Sbjct 447 ACCTGGGCACAGCAGTTCGCCGCACT-CAACCGCGACGAGATGATGGAGCGTGTCGTGCG 389 Query 53989 GGCGTTCCGCCATTGGGTCGGCGCCGACCAGNNNNNNNNNNNNNNNNNNNNNACCATCAA 54048 | | | | ||| ||||||| || | ||| || Sbjct 388 GTCACTGCAGTTCTGGATCGGCGCGGAGGTGGAGGTGTCCGAGG--------ACC-TCGG 338 Query 54049 CGCGCACCACAACTACACG---CAGAAGGAGCGGCACGGCGACCGTGACGTGTGGTTGAC 54105 | ||||||||||||||| | || || ||||| || | || ||||| || | Sbjct 337 CTGCCACCACAACTACACGGCCCGCGAGACGCACCACGGTGAGC-TGC--TGTGGGTGTC 281 Query 54106 CCGTAAGGGTGCGATCGACGCGAACGAGGGTGTGCGGGGCCTGATTCCGGGCTCGATGGG 54165 ||| |||||||| ||| |||| | | || || | || ||||| ||||| |||||||| Sbjct 280 CCGCAAGGGTGCCATCAACGCCGAGGTCGGCGTCCCCGGGCTGATCCCGGGGTCGATGGG 221 Query 54166 CACCTGTTCGTATGTCGTGACCGGCAAGGGCAATCCCGAGGCGT---TGTGCTCGGCGCC 54222 || ||||| |||||| |||||| ||| || |||| || ||||| || || Sbjct 220 TACGGCGTCGTACGTCGTGTCCGGCAGGGGGAA---CGAGCAGTCCCTGTGCAGTGCACC 164 Query 54223 GCACGGTGCGGGCCGCCGGTTCTCGCGCACGAAGGCACGCAAGCTGTTCACGGTCGACGA 54282 |||||| || ||||| | |||||| |||||||| |||||| |||||||||||||| Sbjct 163 GCACGGAGCAGGCCGGGCCTACTCGCGGACGAAGGCGCGCAAGACCTTCACGGTCGACGA 104 Query 54283 CCTCGAAGCGCGTATGACGGGCATCGAGTACCGCAAGGGCGAGGCGTGGGTCGATGAGAT 54342 ||| ||| ||| || |||||||||||| | ||||||| ||||| ||||| Sbjct 103 CCTGCGGGCGGCGATGGTCGGGATCGAGTACCGCGACACGGAGGCGTTCGTCGACGAGAT 44 Query 54343 TCCCGACGCTTACAAGCCGATCGACGTTGTGATGCACGACGC 54384 |||| ||| |||||| |||||| |||||| ||| || Sbjct 43 CCCCGGCGCCTACAAGGACATCGACCAGGTGATGGCCGATGC 2 >seq231474 Length=516 Score = 125 bits (138), Expect = 3e-24 Identities = 325/491 (66%), Gaps = 21/491 (4%) Strand=Plus/Plus Query 53753 GACCGCGTGTGGTTGTTCCTGCACTCCGGTTCGCGTGGCGTCGGTAACAAGATCGCGCAG 53812 |||||||| ||| |||||||||||||||| || || |||||||| ||||||||||| ||| Sbjct 7 GACCGCGTCTGGCTGTTCCTGCACTCCGGCTCCCGCGGCGTCGGCAACAAGATCGCCCAG 66 Query 53813 AAGCACATTCAGGCCGCGCAGGGCTATTGCCT-CGCCAATGGGCTGCACGTGCCACACAA 53871 | ||||| ||| |||| | | |||| ||| ||| | || |||| || Sbjct 67 CACCACATCAAGGTCGCGAGCGACCTGTGCCGACGCTGGTGGATCG-ACCTGCCCGACCC 125 Query 53872 GGATCTGGCGTACCTCGTCGAGGGCACGGTCGA---GTTCGACCGCTACCTCGTTGAATT 53928 || || || ||||| || ||||| || ||| |||| |||| || || | Sbjct 126 CGACCTCGCCTACCTGGTGGAGGG---GGACGACACGTTCTGGGCCTACATCCGCGAGAT 182 Query 53929 ACGTTGGGCGCAGCGGTTTGCG-TACTACAACCGCGCCGAAATGATGGACCGATTCGAGC 53987 || ||||| |||| || || | || |||||||| || |||||| |||| || || Sbjct 183 GCGGTGGGCCCAGCACTTCGCCCTGCT-CAACCGCGAGGAGATGATGCACCGCGTCCAGG 241 Query 53988 AGG-CGTTCCGCCATTGGGTCGGCGCCGACCAGNNNNNNNNNNNNNNNNNNNNNACCATC 54046 ||| ||| || | | | ||||| |||| || ||| Sbjct 242 AGGTCGTCGCGG-ACGAGCTGGGCGC-GACC--------GTGCAGGCGGACGAGACGATC 291 Query 54047 AACGCGCACCACAACTACACGCAGAAGGAGCGGCACGGCGACCGTGACGTGTGGTTGACC 54106 ||| |||||||||||||| || ||||| || || || |||||| || || Sbjct 292 AACTGCCACCACAACTACACCGAGCGCGAGCGCGTGTTCGGTCGCGAGGTGTGGGTGTCC 351 Query 54107 CGTAAGGGTGCGATCGACGCGAACGAGGGTGTGCGGGGCCTGATTCCGGGCTCGATGGGC 54166 || ||||| |||||| ||| | |||||| || || ||||| || |||||||||||| Sbjct 352 CGCAAGGGCGCGATCCGTGCGGGCAAGGGTGATCGCGGGCTGATCCCCGGCTCGATGGGC 411 Query 54167 ACCTGTTCGTATGTCGTGACCGGCAAGGGCAATCCCGAGGCGTTGTGCTCGGCGCCGCAC 54226 || ||||| ||||| || ||| |||| | || | || || ||||| |||||| Sbjct 412 ACGGCGTCGTACGTCGTCACGGGCCTGGGCTACCCGCCGTCGCTGATGTCGGCCCCGCAC 471 Query 54227 GGTGCGGGCCG 54237 || || ||||| Sbjct 472 GGGGCCGGCCG 482 >seq12676 Length=358 Score = 105 bits (116), Expect = 3e-18 Identities = 131/177 (74%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 53307 TCGACGACCAGACGCTTGCGCAGGCGCAGCAGATCGCCGATCTGCCTTTCGTTTATCCGC 53366 ||||||||| ||||| |||||||| |||||| |||||| || |||| | ||| Sbjct 123 TCGACGACCTCACGCTCGCGCAGGCCAAGCAGACCGCCGAGCTCGACATCGTGTCGCCGT 182 Query 53367 ATGTGGCGCTGATGCCTGATGCGCATTTCGGTAAGGGCAGC-AGTGTCGGCACGGTGATC 53425 | ||||||||||||| || ||||| | || ||||| ||| | ||||| | || ||| Sbjct 183 ACCTGGCGCTGATGCCGGACGCGCACCTGGGCAAGGG-AGCGACGGTCGGTTCCGTCATC 241 Query 53426 CCGACCGAGGGCGCTGTGATCCCGGCGGCCGTCGGCGTCGATATTGGCTGCGGCATG 53482 || ||| || ||| | |||||||| || ||||| || || || |||||||| ||| Sbjct 242 CCCACCAGGGACGCGATCATCCCGGCCGCGGTCGGGGTGGACATCGGCTGCGGGATG 298 >seq189415 Length=2896 Score = 93.3 bits (102), Expect = 2e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 37640 TGCGCGCAGACCGACCCCGAAATCTTCTTTCCAGAGCAGGGCGGCAGCACCCGCGAGGCC 37699 |||||||||||||||||||| ||||| || ||| |||||||| |||||||||||| Sbjct 551 TGCGCGCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAGGGCGGCTCGACCCGCGAGGCC 492 Query 37700 AAGCGCATTTGCGGCGGCTGCCAGGTGGCCGACGAGTGTCTCACGTGGGCGCTG 37753 |||||||| ||| |||||| ||||| | ||||| ||| || |||||| Sbjct 491 AAGCGCATCTGCCAGGGCTGCGAGGTGAAGGCGGAGTGCCTCGAGTACGCGCTG 438 >seq20617 Length=36039 Score = 89.7 bits (98), Expect = 2e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 38533 ATCGAGTGCATCGACATCACCGAGCACATGGGGTTTTGCCTCGGCAACGCCACCAAATAC 38592 |||||||||||||| |||||| |||||||| || ||| | |||||||| | || ||| Sbjct 28194 ATCGAGTGCATCGAGATCACCAAGCACATGAACTTCTGCTTGGGCAACGCGATGAAGTAC 28135 Query 38593 GTCTGGCGTTGCGACCTCAAGCACGACGCAATCGAGGACTTACGTAAGGCAATTCAGTAC 38652 ||||||| | |||||| |||| | ||||| | || ||||| | |||||| Sbjct 28134 ATCTGGCGCGCTGGGCTCAAGGGCGACAGTGTGGAGGATCTGCGCAAGGCCAAGCAGTAC 28075 Query 38653 ATCGAGTTTGAAATCGCCCGGC 38674 ||||| || || |||| ||||| Sbjct 28074 ATCGACTTCGAGATCGACCGGC 28053 >seq171065 Length=1298 Score = 87.8 bits (96), Expect = 7e-13 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 38536 GAGTGCATCGACATCACCGAGCACATGGGGTTTTGCCTCGGCAACGCCACCAAATACGTC 38595 ||||||||||| ||||||||||||||||| | |||||||||| | ||| |||||| Sbjct 65 GAGTGCATCGAGATCACCGAGCACATGGGCTACCTGCTCGGCAACGTGATCAAGTACGTC 124 Query 38596 TGGCGTTGCGACCTCAAGCACGACGCAATCGAGGACTT 38633 ||||| |||| ||||| ||| ||| | |||||||| Sbjct 125 TGGCGCGCCGACATCAAGGGCGAGGCACTGGAGGACTT 162 >seq47396 Length=7053 Score = 82.4 bits (90), Expect = 3e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1000 GTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAGCCGCCGGTTGCACGTTCGAGTCGTGCC 1059 ||||||||| |||||||||||||||||||||| |||| ||||||| |||| |||| || | Sbjct 4059 GTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTGTC 4118 Query 1060 GCGCCCGC 1067 || || || Sbjct 4119 GCCCCTGC 4126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189964883587760