Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_014461.1 Length=73453 Score E Sequences producing significant alignments: (Bits) Value seq219192 89.7 2e-13 >seq219192 Length=699 Score = 89.7 bits (98), Expect = 2e-13 Identities = 235/354 (66%), Gaps = 11/354 (3%) Strand=Plus/Plus Query 48522 GTCCAGCCACGAGACGGCGGCAGCTTCCGGCGCGGCGCACCTGCTTAGCTTCACTGGCAC 48581 ||||||| |||| | || || || ||||| | |||||||| ||| ||||| Sbjct 1 GTCCAGCATCGAGTCCGCAGCGGCCGGTGGCGCCGGACACCTGCTCTCGTTCCTCGGCAC 60 Query 48582 GGATTCGCTTGTGTCGCTTGACTGGATCGACCGTTACTAC---GGCGGCGA-GTACATCG 48637 || ||| | |||||| |||| ||||||| |||||| |||| ||| | || ||| Sbjct 61 CGACTCGATGCCGTCGCTCGACTTCGTCGACCGGTACTACCCGGGCGACGACGGAC-TCG 119 Query 48638 CCGGGTCG---GTGCCCGCGACTGAGCATTCGGTGATGTGTACCGGGATCGAGACGGTGG 48694 | | || || || ||||| ||||| |||||||| | | || | | | | Sbjct 120 TGGCGGCGAGCGTCCCGGCGACCGAGCACAGCGTGATGTGCGTCCG---CGGGGCCGACG 176 Query 48695 GGGAGCTTGAGACGTTCCGGCGTCTGCTCACCCTGTATCCGGAAGGCATCGTAAGCATCG 48754 ||||||| ||||||||| || | ||| | | || ||| |||||||| | Sbjct 177 GGGAGCTCGAGACGTTCGAGCAGATCCTCGACGTCTACCCGACGGGCATCGTGTCGGCGG 236 Query 48755 TTAGCGACACGTTCGACCTGTGGCGGGTGCTCACGGAGTACCTGCCGACGCTGGCGAAGC 48814 | |||||| |||||||||| ||| |||| ||| || ||| ||| | | | Sbjct 237 TCAGCGACGGCTTCGACCTGTTCAAGGTCATCACCGAGACGCTCCCGCAGCTCAAGGACC 296 Query 48815 AGATCAAGTCGCGTGACGGCAAGCTGGTGATCCGGCCCGACTCGGGCGATCCGG 48868 ||||| ||| ||||||||||| |||||||| || |||||||| || |||| Sbjct 297 GGATCACCGGGCGCGACGGCAAGCTCGTGATCCGCCCGGACTCGGGTGACCCGG 350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 234131470916882