Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq13366 122 1e-22 seq170880 89.7 6e-13 >seq13366 Length=6323 Score = 122 bits (134), Expect = 1e-22 Identities = 896/1434 (62%), Gaps = 51/1434 (4%) Strand=Plus/Minus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| || || ||||| | ||| | ||| | || || || ||||| ||||| |||||| Sbjct 2270 GAAAGGCCTCAACACATGCTTATGAGAGTCTCCATAGGCATTCATGGTGAAGACATTGAT 2211 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAAC 111724 || | | || || | | |||||| | ||| || | || |||| || || Sbjct 2210 AGTGCAATCAATACTTATAATATGATGTCAGAGAAATATTTT-ACACATGCAAGCCCTAC 2152 Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784 || ||| ||| | ||||| | || || | ||| ||||||||||| || | || Sbjct 2151 ACTGTTCTCCGCAGCCACACCGCGGCCACAGCTTTCCTCCTGTTTCCTTATAGCTATGAA 2092 Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844 || ||| || | || |||| | ||| | | ||||||| ||| || || | Sbjct 2091 AGACGATAGCATTGAAGGTATTTTTGATACTTTAAAACAATGTGCATTAATTTCTAAATC 2032 Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA- 111902 |||||||| || || | || | ||| ||||||| || | || || ||| Sbjct 2031 TGCTGGTGGCATAGGTTTACATACACATTGCATCAGAGCT--CAGGGTTCTTACATAGCT 1974 Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 || || ||||| ||| ||||| | | |||||| | | || | |||| || || Sbjct 1973 GGCACTAATGGGGTCTCAAATGGTCTAGTGCCAATGTTGAGAGTGTATAACAATACTGCC 1914 Query 111963 CGCTATGTAAACCAAGCTGGG------CGTCGCAAGGGATCTATCGCAGTCTATCTTGAG 112016 | |||||| | |||| ||| |||| | | || | ||| | ||| | ||| Sbjct 1913 AGATATGTAGATCAAGGTGGAAACAAACGTCCCGGCGCATTT---GCAATTTATTTAGAG 1857 Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076 || ||||| |||||||| | || ||| | || || ||| |||| | || || Sbjct 1856 CCTTGGCATGCGGATATATTTGAATTCTTGGATTTAAAGAAGAACACAGGTAAGGAAGAA 1797 Query 112077 GCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 112136 | | | || || || | ||| | ||||| |||||||| || ||||| ||||| Sbjct 1796 ATGAGAGCTAGAGAACTGTTTTATGCTTTATGGATACCAGATCTGTTTATGAAAAGAGTA 1737 Query 112137 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCC 112196 || || || |||| |||| | ||||| | | || || ||| | || | Sbjct 1736 GAAAAGGATGAAGTTTGGAGTCTCATGTGTCCTCATGATTGTCCTGGCCTCGCTGACTGC 1677 Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG 112256 | || ||||| ||||||| || || | || || || ||||||| || | | Sbjct 1676 TTTGGAGAGGAATTTGAAGAACTATATGCCAAATATGAAGAAGAAAAACGATTTA-TAAA 1618 Query 112257 ACG-GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 112315 || || |||| || | ||||| | ||| | | | ||| ||||||||||| Sbjct 1617 ACAAGTCAGAGCTCAAGAGTTATGGAAGTCAATTATAGAAGCCCAAGTGGAGACTGGTAC 1558 Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375 |||||| ||| | || || || || |||||| ||||||||||||||| ||| | || Sbjct 1557 ACCATACATGTTGTATAAGGATGCTTGTAACAGAAAGAGTAATCAAAAAAATCTTGGCAC 1498 Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 112435 || || || ||| || || || || | || ||| || ||||||| ||| Sbjct 1497 TATTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGC 1438 Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT 112495 ||||| ||||| || || || || || || || ||| || | || | ||| Sbjct 1437 AGTGTGCAACCTTGCTTCCATAGCACTTAACATGTTTGT------TGAAAATAACAGATT 1384 Query 112496 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTAT 112555 | ||| | ||||| | | ||| | || || | ||| || |||| |||||| |||||| Sbjct 1383 TAATTTTAAAAAATTAAAAGAAATCACAAAGATTGTAACTCAAAATTTAAACAAAGTTAT 1324 Query 112556 TGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612 |||| |||||||| || || |||| || | || ||||||||||| | || Sbjct 1323 TGATGTTAATTTTTATCCTGTCCCTGAG---GCAAAAACTTCAAATATGAGACATAGACC 1267 Query 112613 AATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGA 112672 |||||| | ||||| || || | || |||| || | ||| | | || | Sbjct 1266 TATTGGTATTGGTGTTCAGGGCATGGCAGATGCGTT-----TGTGTTGATGAGAATAT-C 1213 Query 112673 TTCCGACGAAGCGAAGGAAA------TCAATGCGCGTATATTTGAGACAATGTATCACGC 112726 || ||| | ||| | || ||||| | |||||||| ||||| ||| | | Sbjct 1212 TTACGAAAGTGAGAAAGCAATACTTCTCAATCAACAAATATTTGAAACAATTTATTATGG 1153 Query 112727 CGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 112786 || | || || |||| || || || || || ||| |||| || | | | || Sbjct 1152 TGCATTAGAAGCTAGTTGTGAATTAGCTGAAAAAGAAGGTGCATACAGCACATATCAAGG 1093 Query 112787 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG---AAGGTGAGACCAAGCT 112843 |||||| ||||| | || || | ||||||||||| || | || | || Sbjct 1092 GAGTCCAGCAAGCCAAGGTATCCTCCAGTATGATATGTGGGACAAAACTCCTACAGACCT 1033 Query 112844 TCACTACGACTGGGACGCTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGT 112901 | | ||||||| | || || ||| || ||| | | ||| | || || | Sbjct 1032 T---TGGGACTGGGCTGTCCTTAAAGAAAAGATAGCAA--AACATGGTTTGCGCAATTCT 978 Query 112902 CTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 112961 || ||||| || || ||||| || ||||| || |||||||| | || || | ||||| Sbjct 977 CTATTGATAGCTCCTATGCCGACTGCCTCTACTGCACAAATTCTTGGCAACACTGAATCT 918 Query 112962 TTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTT 113015 |||||||||| || | || || || | |||||| | | | ||||| ||| Sbjct 917 TTTGAACCCTTTACATCAAATATTTACCAAAGAAGAGTCTTATCTGGAGAATTT 864 >seq170880 Length=1133 Score = 89.7 bits (98), Expect = 6e-13 Identities = 284/431 (66%), Gaps = 11/431 (3%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTC-TG 111669 ||| ||| ||||| ||||||| ||||| ||||| ||||| || || | | | | || Sbjct 660 CCCGCAGCACATGCTCATGCGCGTCGCTATCGGCATCCACGGC-AACAACGTCACGCGTG 718 Query 111670 TTTTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTC 111728 | ||||| ||| || | |||||| ||| |||| ||| || | || |||||| Sbjct 719 CGATCGAGACGTACAACTACATGTCCGAAAAGTAC-TTCACCCATGCCTCGCCCACCCTC 777 Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788 ||||| ||||| || || ||||| | | ||| ||||| | || | ||||| Sbjct 778 TTCAATGCTGGCACGCCCCACCCCCAGCTTGCGTCTTGCTTCCTCGTGGCGATGAAGGAC 837 Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848 || || ||| | ||||| |||| ||| || | || ||| ||||| ||| || Sbjct 838 GACTCGATCGAGGGCATCTACGACACCCTGAAGACGTGCGCCATGATCTCCAAGACCGCC 897 Query 111849 GGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAAC--AAGTCTCGTATTAGAGGTA 111906 || |||||||| | ||||| || | || | ||| | ||| || || | || | Sbjct 898 GGCGGTATCGGCCTCCACATTCACAACATCCGTGCCTCCGGAAG-CT-ACATCGGTGGCA 955 Query 111907 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 111966 |||| || | || | || || | || ||||| ||||| || ||| ||| || |||| Sbjct 956 CAAACGGATACTCGAACGGCATCGTGCCCATGCTCCGCGTCTTCAACAACACTGCCCGCT 1015 Query 111967 ATGTAAACCAAGCTGGG---CGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 112023 |||| |||| | |||| ||| ||| | |||| |||| |||||||| |||| Sbjct 1016 ATGTCGACCAGGGTGGGAACAAGCGCCCGGGTGCGTTCGCCATCTACCTTGAGCCGTGGC 1075 Query 112024 ACGCGGATATC 112034 || | || ||| Sbjct 1076 ACCCCGACATC 1086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618592435419760