Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq13366 156 5e-33
seq170880 93.3 5e-14
>seq13366
Length=6323
Score = 156 bits (172), Expect = 5e-33
Identities = 488/747 (65%), Gaps = 24/747 (3%)
Strand=Plus/Plus
Query 105907 AAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTC 105966
||| ||||| | | | |||||| | || || || | || |||||||||| ||||
Sbjct 864 AAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGATTC 923
Query 105967 ATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTT 106026
| | || || | |||||||| || ||||| || ||||| || || ||||| ||| ||
Sbjct 924 AGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAGAGAATT 983
Query 106027 ACGAAGACCCTTTTCCTTG--ATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTG 106084
|| | ||| | || ||| || ||| || || ||| ||||||| | || |
Sbjct 984 GCGCAAACCATGTT--TTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAA---AGGTCT 1038
Query 106085 GTTTCACCTT---CCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCA 106141
|| | || ||||||||||| | || || | |||||| | ||| || | |
Sbjct 1039 GTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGA 1098
Query 106142 AATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGA 106201
|||| || | ||||| |||||| |||||||| || || || | | | | |
Sbjct 1099 TATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAA 1158
Query 106202 TACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAG 106261
|| || |||||||| || | ||| | | |||| || || | | ||
Sbjct 1159 TAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGA-TAT 1217
Query 106262 CGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCG 106320
|| ||| | ||| |||| || | || |||||||| | |||||||||||| ||||
Sbjct 1218 TCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCT 1277
Query 106321 CATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTT 106377
|||||| || || || |||| || ||||||||||| ||||| ||| |||
Sbjct 1278 CATATTTGAAGTTTTTGC---CTCAGGGACAGGATAAAAATTAACATCAATAACTTTGTT 1334
Query 106378 TAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGT 106437
|| ||||| || ||||||||||||||||| | | ||||| | ||| ||| || |
Sbjct 1335 TAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG---TT 1391
Query 106438 CTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATC 106497
| |||| ||| || | ||| || || || || | ||||| || ||| |||||
Sbjct 1392 ATTTTCA---ACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATC 1448
Query 106498 CTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATT 106557
| ||||| | | || || || || | ||| || ||||| || || | |||
Sbjct 1449 TTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATT 1508
Query 106558 CTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617
||||| ||||||||| |||| || |||||||| || | |||||| || || || |||||
Sbjct 1509 TTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTC 1568
Query 106618 CGTCTGTGACTTGAGAATTGCCTTCCA 106644
| || | | | ||||| ||||||
Sbjct 1569 CACTTGGGCTTCTATAATTGACTTCCA 1595
>seq170880
Length=1133
Score = 93.3 bits (102), Expect = 5e-14
Identities = 321/495 (65%), Gaps = 7/495 (1%)
Strand=Plus/Minus
Query 106888 GATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACG---CCCAGC 106944
||| || | |||||| |||||||| |||| |||| | ||| || |||| |
Sbjct 1086 GATGTCGGGGTGCCACGGCTCAAGGTAGATGGCGAACGCACCCGGGCGCTTGTTCCCACC 1027
Query 106945 TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGA 107004
|| | |||||||| || ||| ||| || ||||| ||||| || | || || | ||
Sbjct 1026 CTGGTCGACATAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCACGATGCCGTTCGA 967
Query 107005 TTGACCATTTGTCCCCCGAATACGAGATTTATT-GGCTCTCACATCATGGATGTGCATCC 107063
| || ||||| || | || || || ||| | | | || ||||| | |
Sbjct 966 GTATCCGTTTGTGCCACCGATGT-AGCTTCCGGAGGCACGGATGTTGTGAATGTGGAGGC 908
Query 107064 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 107123
| ||||| || || ||| ||||| || ||| | | || || | ||||| || |
Sbjct 907 CGATACCGCCGGCGGTCTTGGAGATCATGGCGCACGTCTTCAGGGTGTCGTAGATGCCCT 848
Query 107124 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 107183
||| ||||| ||||| | || | ||||||||| | | ||| || || || |
Sbjct 847 CGATCGAGTCGTCCTTCATCGCCACGAGGAAGCAAGACGCAAGCTGGGGGTGGGGCGTGC 788
Query 107184 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CTTGGGACATCTTGTCGTAT 107242
|||||||||||||||| || | || || |||| ||| || |||||| | || |||
Sbjct 787 CAGCATTGAAGAGGGTGGGCGAGGCATGGGTGAA-GTACTTTTCGGACATGTAGTTGTAC 729
Query 107243 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATG 107302
||||| | || | || | |||||||||||||| || || ||||| | ||||
Sbjct 728 GTCTCGATCGCACGCGTGACGTTGTTGCCGTGGATGCCGATAGCGACGCGCATGAGCATG 669
Query 107303 TATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTT 107362
| || || || || | ||| |||| || |||| ||| | |||||||||
Sbjct 668 TGCTGCGGGCGCTCGGCGACGCGGCCGTCGATGCGGAGAAGGTAGGACCGCTCAAGGGTC 609
Query 107363 TTGAGACCAAAGTAA 107377
|||| |||||||||
Sbjct 608 TTGAAGCCAAAGTAA 594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587937379374920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |