Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq13366 156 5e-33 seq170880 93.3 5e-14 >seq13366 Length=6323 Score = 156 bits (172), Expect = 5e-33 Identities = 488/747 (65%), Gaps = 24/747 (3%) Strand=Plus/Plus Query 105907 AAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTC 105966 ||| ||||| | | | |||||| | || || || | || |||||||||| |||| Sbjct 864 AAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGATTC 923 Query 105967 ATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTT 106026 | | || || | |||||||| || ||||| || ||||| || || ||||| ||| || Sbjct 924 AGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAGAGAATT 983 Query 106027 ACGAAGACCCTTTTCCTTG--ATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTG 106084 || | ||| | || ||| || ||| || || ||| ||||||| | || | Sbjct 984 GCGCAAACCATGTT--TTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAA---AGGTCT 1038 Query 106085 GTTTCACCTT---CCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCA 106141 || | || ||||||||||| | || || | |||||| | ||| || | | Sbjct 1039 GTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGA 1098 Query 106142 AATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGA 106201 |||| || | ||||| |||||| |||||||| || || || | | | | | Sbjct 1099 TATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAA 1158 Query 106202 TACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAG 106261 || || |||||||| || | ||| | | |||| || || | | || Sbjct 1159 TAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGA-TAT 1217 Query 106262 CGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCG 106320 || ||| | ||| |||| || | || |||||||| | |||||||||||| |||| Sbjct 1218 TCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCT 1277 Query 106321 CATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTT 106377 |||||| || || || |||| || ||||||||||| ||||| ||| ||| Sbjct 1278 CATATTTGAAGTTTTTGC---CTCAGGGACAGGATAAAAATTAACATCAATAACTTTGTT 1334 Query 106378 TAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGT 106437 || ||||| || ||||||||||||||||| | | ||||| | ||| ||| || | Sbjct 1335 TAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG---TT 1391 Query 106438 CTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATC 106497 | |||| ||| || | ||| || || || || | ||||| || ||| ||||| Sbjct 1392 ATTTTCA---ACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATC 1448 Query 106498 CTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATT 106557 | ||||| | | || || || || | ||| || ||||| || || | ||| Sbjct 1449 TTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATT 1508 Query 106558 CTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617 ||||| ||||||||| |||| || |||||||| || | |||||| || || || ||||| Sbjct 1509 TTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTC 1568 Query 106618 CGTCTGTGACTTGAGAATTGCCTTCCA 106644 | || | | | ||||| |||||| Sbjct 1569 CACTTGGGCTTCTATAATTGACTTCCA 1595 >seq170880 Length=1133 Score = 93.3 bits (102), Expect = 5e-14 Identities = 321/495 (65%), Gaps = 7/495 (1%) Strand=Plus/Minus Query 106888 GATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACG---CCCAGC 106944 ||| || | |||||| |||||||| |||| |||| | ||| || |||| | Sbjct 1086 GATGTCGGGGTGCCACGGCTCAAGGTAGATGGCGAACGCACCCGGGCGCTTGTTCCCACC 1027 Query 106945 TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGA 107004 || | |||||||| || ||| ||| || ||||| ||||| || | || || | || Sbjct 1026 CTGGTCGACATAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCACGATGCCGTTCGA 967 Query 107005 TTGACCATTTGTCCCCCGAATACGAGATTTATT-GGCTCTCACATCATGGATGTGCATCC 107063 | || ||||| || | || || || ||| | | | || ||||| | | Sbjct 966 GTATCCGTTTGTGCCACCGATGT-AGCTTCCGGAGGCACGGATGTTGTGAATGTGGAGGC 908 Query 107064 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 107123 | ||||| || || ||| ||||| || ||| | | || || | ||||| || | Sbjct 907 CGATACCGCCGGCGGTCTTGGAGATCATGGCGCACGTCTTCAGGGTGTCGTAGATGCCCT 848 Query 107124 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 107183 ||| ||||| ||||| | || | ||||||||| | | ||| || || || | Sbjct 847 CGATCGAGTCGTCCTTCATCGCCACGAGGAAGCAAGACGCAAGCTGGGGGTGGGGCGTGC 788 Query 107184 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CTTGGGACATCTTGTCGTAT 107242 |||||||||||||||| || | || || |||| ||| || |||||| | || ||| Sbjct 787 CAGCATTGAAGAGGGTGGGCGAGGCATGGGTGAA-GTACTTTTCGGACATGTAGTTGTAC 729 Query 107243 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATG 107302 ||||| | || | || | |||||||||||||| || || ||||| | |||| Sbjct 728 GTCTCGATCGCACGCGTGACGTTGTTGCCGTGGATGCCGATAGCGACGCGCATGAGCATG 669 Query 107303 TATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTT 107362 | || || || || | ||| |||| || |||| ||| | ||||||||| Sbjct 668 TGCTGCGGGCGCTCGGCGACGCGGCCGTCGATGCGGAGAAGGTAGGACCGCTCAAGGGTC 609 Query 107363 TTGAGACCAAAGTAA 107377 |||| ||||||||| Sbjct 608 TTGAAGCCAAAGTAA 594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587937379374920