Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_015210.1 Length=61440 Score E Sequences producing significant alignments: (Bits) Value seq136124 159 1e-34 >seq136124 Length=3505 Score = 159 bits (176), Expect = 1e-34 Identities = 402/596 (67%), Gaps = 24/596 (4%) Strand=Plus/Plus Query 21321 GCCGCCGCGCGCACCCTGGGCAACGACGCCTCGCTCCCGGCCACCTCGGCGAGCAAGGCC 21380 ||| || |||||||||| || |||| | || |||||||| || | | || || | Sbjct 293 GCCACCTCGCGCACCCTCGGGTCCGACCTGACCCTGCCGGCCACGTCCG-GTGC--GGAC 349 Query 21381 GCCGCCGCGATGAC---CGAGCTGAGCAAGGGCGGGTTCTCGGTCCAGGACTCCATGACC 21437 || ||| ||| | |||||| ||||| || | | | ||| | || ||| | Sbjct 350 GCGGCCAAGATCATGGTCGAGCTCGCGAAGGGTGGCCTGACCCTGCAGCAGTCGATGTCG 409 Query 21438 GCGGCGCGGGGCACCCTGATCCTG---gccgccgccgcgcaggtcgacgccgcgcgcgcc 21494 || ||| |||||| ||||| | ||||| |||||||||||||||| ||| || Sbjct 410 GCTGCGAAGGGCAC---GATCCAGCTCGCCGCGGCCGCGCAGGTCGACGGCGCCACGGCG 466 Query 21495 gccgAGATCCAGTCGGACGCCCTGAACATCTTCGGGCTGAAAGCCGACTACGCCACCAAG 21554 |||||||||||| | || | |||||| ||| || ||| || | || || | Sbjct 467 GCCGAGATCCAGGCCAACTCGCTGAACCAGTTCTCCCTCTCAGCGAACAAGGCGGGCATG 526 Query 21555 GCCGCGGACATCCTGGCCAACACCGCGAACTC-GTCGTCG--GTCGAGATCGAGGACGTG 21611 | ||| ||| | || || |||||||||||| | | || || | || || | ||| | Sbjct 527 GTCGCCGACGTGCTCGCGAACACCGCGAACGCTGCCGCCGGCGGCGTGACC---GACATC 583 Query 21612 GCCAACTCGATGAAGTTCG-CGGGCGCGACGGCGAACACCCTCGGCATCGACATGAAGGA 21670 |||| |||||||||| || ||||| || | ||| ||||||| ||| |||| ||| Sbjct 584 GCCACGTCGATGAAGTACGTCGGGCCCGTC-GCGGCTGCCCTCGGGATCAACATCGGGGA 642 Query 21671 CACGGCCGCCGCGATCGGCGTCCTGGGCAACGCGGGCATCAAGGGCGAGCAGGGCGGCAC 21730 ||| || || |||||||| |||||| ||| |||| |||||||||| | ||| || Sbjct 643 CACCGCGGCGTCGATCGGCCTCCTGGCTAACCAGGGCCTCAAGGGCGACACCGCCGGTAC 702 Query 21731 CACGCTGCGCGCCGTGCTCTCGTCCCTGGTCGC-GCCGTCGAAGCAAGC-CAGCATCGCG 21788 | |||| |||| |||| | || || | ||| ||| || ||||| || ||| | | | Sbjct 703 CGCGCTCCGCGGAATGCTGGCATCGCTCG-CGCGGCCCTCAAAGCAGGCGCAG-AAGGGG 760 Query 21789 ATGGACGAACTGGGCCTGAGCGTGTTCGACGCCGAGGGCAAGTTCAAGGGGATGCCGGTC 21848 | |||| || || || || |||||| | |||| |||||| || |||| | | Sbjct 761 GTCGACGCCCTCGGGCTCTCGGTCTTCGACTCGCAGGGGAAGTTCGTCGGCATGCGTGCC 820 Query 21849 CTGTTCGACCAGCTCGCCGCCGCGCAGAAGCGGATGACGCCCGAGGCGTTCGCCGC 21904 | || | |||| || || |||||||||||||||| ||| |||||| || Sbjct 821 GTCATCCAGTCGCTCTCCAAGGCACAGAAGCGGATGACGCAGGAGCAGTTCGCTGC 876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195839888886092