Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq253728 150 4e-32 seq208259 107 5e-19 seq268213 105 2e-18 seq56468 91.5 3e-14 seq206635 87.8 4e-13 >seq253728 Length=404 Score = 150 bits (166), Expect = 4e-32 Identities = 221/310 (71%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 32538 GCTGTACTTCCTCGGCACCAACGCGCGCACTGCGCAGAGCTACCACGGCAACCTGTATTT 32597 |||| ||||||||||||| ||| ||||| |||||| | |||||||| | || || Sbjct 71 GCTGCACTTCCTCGGCACGAACTTTCGCACCGCGCAGGGGCGGCACGGCAATTTCTACTT 130 Query 32598 CGACGAGTACTTCTGGGTGCCGCGCTTCCAGGAGCTGCGCAAGGTCGCCTCCGGCATGGC 32657 |||||||| ||||||||| | ||||| |||||||| |||||||||||| || ||||| Sbjct 131 CGACGAGTTCTTCTGGGTTCACAGCTTCGAGGAGCTGAACAAGGTCGCCTCGGGGATGGC 190 Query 32658 GATTCACGACCAGTGGCGGCAGACGTATTTCTCGACGCCGTCGAGCCTCGCGCACGACGC 32717 || ||| | ||||||| | || || || |||||||| |||| | | |||| ||| Sbjct 191 GACGCACAAGAAGTGGCGAAAAACCTACTTTTCGACGCCATCGACCGTGCTGCACCCCGC 250 Query 32718 TTATCCGTTCTGGTCGGGCAAGCTGTTCAACCGTGGCCGACCGAAAGATCAGCACGTATC 32777 ||||| | |||| | ||| ||| | |||||| ||||| ||| || | | ||| Sbjct 251 CTATCCATACTGGACCGGCGAGCGGCGCAACCGGCGCCGAAAGAAGGAAGATCGCGTCGA 310 Query 32778 GATCGACATTTCGCACGCGGCGCTGGCCG-CGGGCCGTTCGTGTCAGGACGGCCAGTGGC 32836 | | ||| | || || |||||||| | ||| || ||| | | ||| | |||| Sbjct 311 GCTGGACGTGAGCCATGCAGCGCTGGCGGACGGCGCGGTCG-GCCCCGACCGGATTTGGC 369 Query 32837 GCCAGATCGT 32846 |||| ||||| Sbjct 370 GCCACATCGT 379 >seq208259 Length=548 Score = 107 bits (118), Expect = 5e-19 Identities = 351/533 (66%), Gaps = 38/533 (7%) Strand=Plus/Minus Query 33071 TCGGCGACGAGGAGGTCTGGATCGGCTACGACCCGTCGCATA-CG-----GGCGACAGCG 33124 ||||| || |||||||||| |||||| |||||| | | | || ||||||| | Sbjct 538 TCGGCCACCGGGAGGTCTGGGCCGGCTATGACCCGCAGGAAAGCGAGGACGGCGACAATG 479 Query 33125 CCGGCTGCGTGGTGATTGCGCCGCCGA---AGCGTCCGGGCGGGAAGTTCCGCGTGCTCG 33181 ||| | |||| || |||| |||| | | ||| ||| ||||||||| | |||| Sbjct 478 CCGCCCTCGTG---ATCGCGCTGCCGCCTGACGGACCGACCGGCAAGTTCCGCCTTCTCG 422 Query 33182 AGCGGTTCCAGTGGCACGGTTTGGACTTCGAGGCGCAGGCCGCGCAAATCGAA-----GC 33236 |||| ||| | || ||||| |||||||||||| || ||| || Sbjct 421 AGCGTCATCAGATCAAGGGC---GACTTTCAGGCGCAGGCCG---AATTCGTTCGTGCGC 368 Query 33237 GC-TGACGCGGCGCTATCGCGTGACCTACATCGGCATTGACACGACCGGGATCGGGCAGG 33295 || || ||||| ||| | || || ||||||| |||| || || || || || Sbjct 367 GCCTGGCGCGG---TATAACTGCACGTATCTCGGCATCGACAAGAAGGGCATTGGCGCGG 311 Query 33296 GCGTGTATCAGCTCGTC----ACG--AAGTTTTTCCCGGCCGCGACGCCGTTCCACTACT 33349 || |||||| || | ||| ||| | | |||| | ||| | || | || | Sbjct 310 CGGTCTATCAGATCCTGCGGGACGCCAAGGTG--CGCGGCGTGGTCGC-GATCGAATATT 254 Query 33350 CGGTGGAAATCAAGACCGCGCTGGTGATGAAGGCGCAGAACGTGATC-CGCAAGGGTCGG 33408 || | || | ||| | | || | |||||||||||||| |||||| ||| ||| || Sbjct 253 CGCTCGAGGTGAAGGCGATGATGATCATGAAGGCGCAGAATGTGATCTCGCGCGGG-CGC 195 Query 33409 CTCGAGTTCGACGCCGGCTGGAACGATCTCGCCGCGTCATTCATGGCGATCAAGAAAACC 33468 | | |||||| || ||||| |||| ||| | || ||| | ||||||||||||| Sbjct 194 ATGGCGTTCGATGCGAGCTGGCTCGATGTCGTTTCATCCTTCGTCTCGATCAAGAAAACG 135 Query 33469 ATCACGCCCAGCGGCCTGCAGGTCACGTACAAGGCGAGCCGCTCGGAAGAAGCGAGCCAC 33528 | || ||||||||| | | ||||||| |||||| |||| | || | ||||| Sbjct 134 CTGACCACCAGCGGCCGGAACGTCACGTTCAAGGCCGGCCGGGGCGGCGACGACGGCCAC 75 Query 33529 GGCGATCTCGCCTGGGCGTGCATGCACGCGCTGGCGAACGAGCCGCTCGAAGG 33581 | |||||||||||| || |||||||| || ||||| ||||| || || Sbjct 74 GCGGATCTCGCCTGGTCGATCATGCACGTCCTCAACAACGAACCGCTGGACGG 22 >seq268213 Length=253 Score = 105 bits (116), Expect = 2e-18 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 32545 TTCCTCGGCACCAACGCGCGCACTGCGCAGAGCTACCACGGCAACCTGTATTTCGACGAG 32604 |||||||| ||||| |||||||| |||||| |||| |||||||| | |||||||||||| Sbjct 106 TTCCTCGGGACCAATGCGCGCACCGCGCAGGGCTATCACGGCAATTTCTATTTCGACGAG 165 Query 32605 TACTTCTGGGTGCCGCGCTTCCAGGAGCTGCGCAAGGTCGCCTCCGGCATGGCGATTCAC 32664 | |||||| | ||| |||| || |||||||||| || |||||||| ||| Sbjct 166 TTTTTCTGGACCTACGGGTTCGAGGAACTCAACAAGGTCGCCAGCGCGATGGCGATGCAC 225 Query 32665 GACCAGTGGCGGCAGACGTATTTCTCGA 32692 | | |||| | ||||||||||||| Sbjct 226 AAGCGCTGGCCCCGCACGTATTTCTCGA 253 >seq56468 Length=1893 Score = 91.5 bits (100), Expect = 3e-14 Identities = 232/347 (67%), Gaps = 11/347 (3%) Strand=Plus/Plus Query 29872 GATGTCCTCGACCA-CGCAGCCCGCGCCGAATTCCTCGATCACGTACGCATCGTTCGAGC 29930 ||||| ||||| || | ||||| ||| | || |||| || || || | ||| || Sbjct 124 GATGTTCTCGATCAGCACAGCCTT-GCCCATGTCTTCGACGACATAGGCGTGGTTGACGC 182 Query 29931 TTTCGAAGTTCTCGATGCGATCGCGCTTCGGGTTGTCGATGAGCGCGCGACGGCGCGCAC 29990 | ||| |||||||||| | |||||||| | |||||| || | |||||| | | Sbjct 183 TCTCGTAGTTCTCGATCTGGTCGCGCTTGGCGTTGTCCTCGATCTTGCGACGCTCGGTGC 242 Query 29991 CGATTTGCCAGTACAGCGACAGGTTGTCCAGGCGCGTGATCATCAGCGCGCGCGGGGGGA 30050 |||| || || | |||||||||| | || ||||||| | |||| | |||| Sbjct 243 CGATCTGTTCATAGACCGACAGGTTGGCGAGCGTGGTGATCAGGATGGCGCTCTTTGGGA 302 Query 30051 AGTACGGCACGCGCACGGCCGGCAGATTGCCGATGCGCTTCTGCGCCGTGATGACGTC-C 30109 | | ||||||||| || || | || | |||||| ||| | | | | |||||| | Sbjct 303 ACTTCGGCACGCGGACCGCGGTCAAACCGCCGATCTTCTTGTCGGACAGCAGGACGTCAC 362 Query 30110 GCGGCGAGCGCTTCGGTCGGC-----GGCTGATCCTTGTTCACGACCGGGAAATACTTGT 30164 ||| | ||| ||||| | | | | ||| | ||| |||| || ||||||||||| Sbjct 363 GCGCC-AGCTGCTCGGTTGCCTTGTCGCCCGATGC--GTTGACGATCGAGAAATACTTGT 419 Query 30165 CCTGCAGCAGCTCGCGGCCGCAGATCACGACGAGATTCGGATCCTCG 30211 | | | ||| |||||||| |||| |||| || | | ||||||| Sbjct 420 CGTTGACGAGCGCGCGGCCGACGATCGCGACCAGGTCTGTATCCTCG 466 >seq206635 Length=401 Score = 87.8 bits (96), Expect = 4e-13 Identities = 120/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 33720 TTCTCGTTCGGCGA-CCCGATCGCCGTGCTGGATCGGCGCGAGCTGCTCGACTACGTCGA 33778 |||||||||||||| ||||| | | |||||| | || |||||| | | || ||||| Sbjct 362 TTCTCGTTCGGCGATCCCGAGC-CGGTGCTGAACCGACGCGAGATCATGGATATGGTCGA 304 Query 33779 GTGCATGCGCATGGGGAACTGGTACGAGCCGCCGCTGCCGCTCGACGGGCTCGCGCGTTC 33838 ||| | | | |||||| |||||||| || |||||||||| || |||||| | Sbjct 303 ATGCTATCAGAACGATCGCTGGTATGAGCCGCCACTATCGCTCGACGGCCTGGCGCGTGC 244 Query 33839 GTTCCGGGCCGCGCCGCATCACAGCTCGGCCATCTACGTGAAGCG 33883 ||| || | |||||||||| |||||||| ||| ||||||| Sbjct 243 GTTTCGTGTGTCGCCGCATCATAGCTCGGCGATCATGTTGAAGCG 199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118641936529508