Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_015265.1
Length=37236
Score E
Sequences producing significant alignments: (Bits) Value
seq253728 150 4e-32
seq208259 107 5e-19
seq268213 105 2e-18
seq56468 91.5 3e-14
seq206635 87.8 4e-13
>seq253728
Length=404
Score = 150 bits (166), Expect = 4e-32
Identities = 221/310 (71%), Gaps = 2/310 (1%)
Strand=Plus/Plus
Query 32538 GCTGTACTTCCTCGGCACCAACGCGCGCACTGCGCAGAGCTACCACGGCAACCTGTATTT 32597
|||| ||||||||||||| ||| ||||| |||||| | |||||||| | || ||
Sbjct 71 GCTGCACTTCCTCGGCACGAACTTTCGCACCGCGCAGGGGCGGCACGGCAATTTCTACTT 130
Query 32598 CGACGAGTACTTCTGGGTGCCGCGCTTCCAGGAGCTGCGCAAGGTCGCCTCCGGCATGGC 32657
|||||||| ||||||||| | ||||| |||||||| |||||||||||| || |||||
Sbjct 131 CGACGAGTTCTTCTGGGTTCACAGCTTCGAGGAGCTGAACAAGGTCGCCTCGGGGATGGC 190
Query 32658 GATTCACGACCAGTGGCGGCAGACGTATTTCTCGACGCCGTCGAGCCTCGCGCACGACGC 32717
|| ||| | ||||||| | || || || |||||||| |||| | | |||| |||
Sbjct 191 GACGCACAAGAAGTGGCGAAAAACCTACTTTTCGACGCCATCGACCGTGCTGCACCCCGC 250
Query 32718 TTATCCGTTCTGGTCGGGCAAGCTGTTCAACCGTGGCCGACCGAAAGATCAGCACGTATC 32777
||||| | |||| | ||| ||| | |||||| ||||| ||| || | | |||
Sbjct 251 CTATCCATACTGGACCGGCGAGCGGCGCAACCGGCGCCGAAAGAAGGAAGATCGCGTCGA 310
Query 32778 GATCGACATTTCGCACGCGGCGCTGGCCG-CGGGCCGTTCGTGTCAGGACGGCCAGTGGC 32836
| | ||| | || || |||||||| | ||| || ||| | | ||| | ||||
Sbjct 311 GCTGGACGTGAGCCATGCAGCGCTGGCGGACGGCGCGGTCG-GCCCCGACCGGATTTGGC 369
Query 32837 GCCAGATCGT 32846
|||| |||||
Sbjct 370 GCCACATCGT 379
>seq208259
Length=548
Score = 107 bits (118), Expect = 5e-19
Identities = 351/533 (66%), Gaps = 38/533 (7%)
Strand=Plus/Minus
Query 33071 TCGGCGACGAGGAGGTCTGGATCGGCTACGACCCGTCGCATA-CG-----GGCGACAGCG 33124
||||| || |||||||||| |||||| |||||| | | | || ||||||| |
Sbjct 538 TCGGCCACCGGGAGGTCTGGGCCGGCTATGACCCGCAGGAAAGCGAGGACGGCGACAATG 479
Query 33125 CCGGCTGCGTGGTGATTGCGCCGCCGA---AGCGTCCGGGCGGGAAGTTCCGCGTGCTCG 33181
||| | |||| || |||| |||| | | ||| ||| ||||||||| | ||||
Sbjct 478 CCGCCCTCGTG---ATCGCGCTGCCGCCTGACGGACCGACCGGCAAGTTCCGCCTTCTCG 422
Query 33182 AGCGGTTCCAGTGGCACGGTTTGGACTTCGAGGCGCAGGCCGCGCAAATCGAA-----GC 33236
|||| ||| | || ||||| |||||||||||| || ||| ||
Sbjct 421 AGCGTCATCAGATCAAGGGC---GACTTTCAGGCGCAGGCCG---AATTCGTTCGTGCGC 368
Query 33237 GC-TGACGCGGCGCTATCGCGTGACCTACATCGGCATTGACACGACCGGGATCGGGCAGG 33295
|| || ||||| ||| | || || ||||||| |||| || || || || ||
Sbjct 367 GCCTGGCGCGG---TATAACTGCACGTATCTCGGCATCGACAAGAAGGGCATTGGCGCGG 311
Query 33296 GCGTGTATCAGCTCGTC----ACG--AAGTTTTTCCCGGCCGCGACGCCGTTCCACTACT 33349
|| |||||| || | ||| ||| | | |||| | ||| | || | || |
Sbjct 310 CGGTCTATCAGATCCTGCGGGACGCCAAGGTG--CGCGGCGTGGTCGC-GATCGAATATT 254
Query 33350 CGGTGGAAATCAAGACCGCGCTGGTGATGAAGGCGCAGAACGTGATC-CGCAAGGGTCGG 33408
|| | || | ||| | | || | |||||||||||||| |||||| ||| ||| ||
Sbjct 253 CGCTCGAGGTGAAGGCGATGATGATCATGAAGGCGCAGAATGTGATCTCGCGCGGG-CGC 195
Query 33409 CTCGAGTTCGACGCCGGCTGGAACGATCTCGCCGCGTCATTCATGGCGATCAAGAAAACC 33468
| | |||||| || ||||| |||| ||| | || ||| | |||||||||||||
Sbjct 194 ATGGCGTTCGATGCGAGCTGGCTCGATGTCGTTTCATCCTTCGTCTCGATCAAGAAAACG 135
Query 33469 ATCACGCCCAGCGGCCTGCAGGTCACGTACAAGGCGAGCCGCTCGGAAGAAGCGAGCCAC 33528
| || ||||||||| | | ||||||| |||||| |||| | || | |||||
Sbjct 134 CTGACCACCAGCGGCCGGAACGTCACGTTCAAGGCCGGCCGGGGCGGCGACGACGGCCAC 75
Query 33529 GGCGATCTCGCCTGGGCGTGCATGCACGCGCTGGCGAACGAGCCGCTCGAAGG 33581
| |||||||||||| || |||||||| || ||||| ||||| || ||
Sbjct 74 GCGGATCTCGCCTGGTCGATCATGCACGTCCTCAACAACGAACCGCTGGACGG 22
>seq268213
Length=253
Score = 105 bits (116), Expect = 2e-18
Identities = 112/148 (76%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 32545 TTCCTCGGCACCAACGCGCGCACTGCGCAGAGCTACCACGGCAACCTGTATTTCGACGAG 32604
|||||||| ||||| |||||||| |||||| |||| |||||||| | ||||||||||||
Sbjct 106 TTCCTCGGGACCAATGCGCGCACCGCGCAGGGCTATCACGGCAATTTCTATTTCGACGAG 165
Query 32605 TACTTCTGGGTGCCGCGCTTCCAGGAGCTGCGCAAGGTCGCCTCCGGCATGGCGATTCAC 32664
| |||||| | ||| |||| || |||||||||| || |||||||| |||
Sbjct 166 TTTTTCTGGACCTACGGGTTCGAGGAACTCAACAAGGTCGCCAGCGCGATGGCGATGCAC 225
Query 32665 GACCAGTGGCGGCAGACGTATTTCTCGA 32692
| | |||| | |||||||||||||
Sbjct 226 AAGCGCTGGCCCCGCACGTATTTCTCGA 253
>seq56468
Length=1893
Score = 91.5 bits (100), Expect = 3e-14
Identities = 232/347 (67%), Gaps = 11/347 (3%)
Strand=Plus/Plus
Query 29872 GATGTCCTCGACCA-CGCAGCCCGCGCCGAATTCCTCGATCACGTACGCATCGTTCGAGC 29930
||||| ||||| || | ||||| ||| | || |||| || || || | ||| ||
Sbjct 124 GATGTTCTCGATCAGCACAGCCTT-GCCCATGTCTTCGACGACATAGGCGTGGTTGACGC 182
Query 29931 TTTCGAAGTTCTCGATGCGATCGCGCTTCGGGTTGTCGATGAGCGCGCGACGGCGCGCAC 29990
| ||| |||||||||| | |||||||| | |||||| || | |||||| | |
Sbjct 183 TCTCGTAGTTCTCGATCTGGTCGCGCTTGGCGTTGTCCTCGATCTTGCGACGCTCGGTGC 242
Query 29991 CGATTTGCCAGTACAGCGACAGGTTGTCCAGGCGCGTGATCATCAGCGCGCGCGGGGGGA 30050
|||| || || | |||||||||| | || ||||||| | |||| | ||||
Sbjct 243 CGATCTGTTCATAGACCGACAGGTTGGCGAGCGTGGTGATCAGGATGGCGCTCTTTGGGA 302
Query 30051 AGTACGGCACGCGCACGGCCGGCAGATTGCCGATGCGCTTCTGCGCCGTGATGACGTC-C 30109
| | ||||||||| || || | || | |||||| ||| | | | | |||||| |
Sbjct 303 ACTTCGGCACGCGGACCGCGGTCAAACCGCCGATCTTCTTGTCGGACAGCAGGACGTCAC 362
Query 30110 GCGGCGAGCGCTTCGGTCGGC-----GGCTGATCCTTGTTCACGACCGGGAAATACTTGT 30164
||| | ||| ||||| | | | | ||| | ||| |||| || |||||||||||
Sbjct 363 GCGCC-AGCTGCTCGGTTGCCTTGTCGCCCGATGC--GTTGACGATCGAGAAATACTTGT 419
Query 30165 CCTGCAGCAGCTCGCGGCCGCAGATCACGACGAGATTCGGATCCTCG 30211
| | | ||| |||||||| |||| |||| || | | |||||||
Sbjct 420 CGTTGACGAGCGCGCGGCCGACGATCGCGACCAGGTCTGTATCCTCG 466
>seq206635
Length=401
Score = 87.8 bits (96), Expect = 4e-13
Identities = 120/165 (73%), Gaps = 2/165 (1%)
Strand=Plus/Minus
Query 33720 TTCTCGTTCGGCGA-CCCGATCGCCGTGCTGGATCGGCGCGAGCTGCTCGACTACGTCGA 33778
|||||||||||||| ||||| | | |||||| | || |||||| | | || |||||
Sbjct 362 TTCTCGTTCGGCGATCCCGAGC-CGGTGCTGAACCGACGCGAGATCATGGATATGGTCGA 304
Query 33779 GTGCATGCGCATGGGGAACTGGTACGAGCCGCCGCTGCCGCTCGACGGGCTCGCGCGTTC 33838
||| | | | |||||| |||||||| || |||||||||| || |||||| |
Sbjct 303 ATGCTATCAGAACGATCGCTGGTATGAGCCGCCACTATCGCTCGACGGCCTGGCGCGTGC 244
Query 33839 GTTCCGGGCCGCGCCGCATCACAGCTCGGCCATCTACGTGAAGCG 33883
||| || | |||||||||| |||||||| ||| |||||||
Sbjct 243 GTTTCGTGTGTCGCCGCATCATAGCTCGGCGATCATGTTGAAGCG 199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 118641936529508
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |