Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq56468 127 5e-25 seq253728 102 2e-17 >seq56468 Length=1893 Score = 127 bits (140), Expect = 5e-25 Identities = 218/307 (71%), Gaps = 17/307 (6%) Strand=Plus/Plus Query 26453 GTCTTCGACGACATACGCGTCGTTCGACGAT-TCGTAGTTCTCGATTTGGTCGCGCTTCG 26511 ||||||||||||||| |||| ||| |||| | |||||||||||||| ||||||||||| | Sbjct 154 GTCTTCGACGACATAGGCGTGGTT-GACGCTCTCGTAGTTCTCGATCTGGTCGCGCTTGG 212 Query 26512 GGTTGTCGATCAGCGAGCGACGGCGCGCACCTTCCTGGAAGTAGATCGACAGGTTCTCCA 26571 |||||| | | |||||| | || ||| |||| ||||||||| | | Sbjct 213 CGTTGTCCTCGATCTTGCGACGCTCGGTGCCGATCTGTTCATAGACCGACAGGTTGGCGA 272 Query 26572 GCTTCGTCACCATCATCGCGCGCTTCGGGAAGAACGGCACACGCACGGCCGGCAGGTTGC 26631 || | || | || || |||| ||| ||||| |||||| || || || | || || Sbjct 273 GCGTGGTGATCAGGATGGCGCTCTTTGGGAACTTCGGCACGCGGACCGCGGTCAAACCGC 332 Query 26632 CGATGCGCTTC-TGGCTGACGATCAGGTCGGC---CGCGAGCTGCTCGGTCG----GT-G 26682 |||| |||| || | ||| | |||| || | ||| ||||||||||| | || | Sbjct 333 CGAT---CTTCTTGTCGGAC-AGCAGGACGTCACGCGCCAGCTGCTCGGTTGCCTTGTCG 388 Query 26683 CCTGCGTCGTGTTGACGATCGGGAAATACTTGTCGTGCAGCAGCTCGCGGCCGCAGATCA 26742 || || | ||||||||||| |||||||||||||| | ||| |||||||| |||| Sbjct 389 CC--CGATGCGTTGACGATCGAGAAATACTTGTCGTTGACGAGCGCGCGGCCGACGATCG 446 Query 26743 CAACGAG 26749 | || || Sbjct 447 CGACCAG 453 >seq253728 Length=404 Score = 102 bits (112), Expect = 2e-17 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29106 GCTGTACTTCCTAGGGACGAACTCGCGCACCGCGCAGTCGTATCACGGCAATCTGTACTT 29165 |||| ||||||| || ||||||| |||||||||||| | ||||||||| | ||||| Sbjct 71 GCTGCACTTCCTCGGCACGAACTTTCGCACCGCGCAGGGGCGGCACGGCAATTTCTACTT 130 Query 29166 CGACGAATATTTCTGGGTGCCGAAGTTCCGCGAGCTGAATACCGTTGCGTCGGGCATGGC 29225 |||||| | |||||||| | | ||| |||||||| | || || ||||| ||||| Sbjct 131 CGACGAGTTCTTCTGGGTTCACAGCTTCGAGGAGCTGAACAAGGTCGCCTCGGGGATGGC 190 Query 29226 GATGCACAAACGCTGGCGGCTGACCTACTTCAGCACGCCGTCGA 29269 || |||||| ||||| |||||||| ||||| |||| Sbjct 191 GACGCACAAGAAGTGGCGAAAAACCTACTTTTCGACGCCATCGA 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129227790267382