Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_015273.1 Length=32317 Score E Sequences producing significant alignments: (Bits) Value seq253728 131 3e-26 seq268213 123 5e-24 seq56468 95.1 2e-15 >seq253728 Length=404 Score = 131 bits (144), Expect = 3e-26 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 25430 GGCAGAGTTGATTTTCCTCGGCACGAATTCGCGAACGGCGCAGAGCTATCACGGCAATTT 25489 ||| ||| || |||||||||||||| | || || |||||| | ||||||||||| Sbjct 65 GGCCGAGCTGCACTTCCTCGGCACGAACTTTCGCACCGCGCAGGGGCGGCACGGCAATTT 124 Query 25490 CTATTTCGACGAGTATTTTTGGGTGAGCGGGTTTCGCCAGCTCAACAAGGTTGCATCGGG 25549 ||| |||||||||| || ||||| | | || |||| |||||||| || ||||| Sbjct 125 CTACTTCGACGAGTTCTTCTGGGTTCACAGCTTCGAGGAGCTGAACAAGGTCGCCTCGGG 184 Query 25550 CATGGCGATGCACAAGAAATGGCGAAAGACGTATTTTTCAACGCCGTCGAGCATCACGCA 25609 ||||||| ||||||||| |||||||| || || ||||| ||||| |||| | | ||| Sbjct 185 GATGGCGACGCACAAGAAGTGGCGAAAAACCTACTTTTCGACGCCATCGACCGTGCTGCA 244 Query 25610 CGAGGCTTACACCTTCTGGAGTGGCGAGCACTACAACAGGGGCCG 25654 | || || | | ||||| ||||||| |||| || |||| Sbjct 245 CCCCGCCTATCCATACTGGACCGGCGAGCGGCGCAACCGGCGCCG 289 >seq268213 Length=253 Score = 123 bits (136), Expect = 5e-24 Identities = 125/160 (78%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 25430 GGCAGAGTTGATTTTCCTCGGCACGAATTCGCGAACGGCGCAGAGCTATCACGGCAATTT 25489 ||| ||| ||||||||||||| || ||| |||| || |||||| |||||||||||||||| Sbjct 93 GGCTGAGCTGATTTTCCTCGGGACCAATGCGCGCACCGCGCAGGGCTATCACGGCAATTT 152 Query 25490 CTATTTCGACGAGTATTTTTGGGTGAGCGGGTTTCGCCAGCTCAACAAGGTTG-CATCGG 25548 |||||||||||||| ||| ||| |||||| | ||||||||||| | || || Sbjct 153 CTATTTCGACGAGTTTTTCTGGACCTACGGGTTCGAGGAACTCAACAAGGTCGCCAGCGC 212 Query 25549 GCATGGCGATGCACAAGAAATGGCGAAAGACGTATTTTTC 25588 | ||||||||||||||| |||| |||||||| || Sbjct 213 G-ATGGCGATGCACAAGCGCTGGCCCCGCACGTATTTCTC 251 >seq56468 Length=1893 Score = 95.1 bits (104), Expect = 2e-15 Identities = 93/115 (81%), Gaps = 4/115 (3%) Strand=Plus/Plus Query 22501 CGATGTTCTCG-GCAACAGCAGCGCGGCCGAGGTCTTCGACGACATACGCATCGTTCGAC 22559 ||||||||||| || || |||| ||| | ||||||||||||||| || | ||| ||| Sbjct 123 CGATGTTCTCGATCAGCA-CAGCCTTGCCCATGTCTTCGACGACATAGGCGTGGTT-GAC 180 Query 22560 GAT-TCATAGTTCTCGATACGGTCGCGCTTCGCGTTGTCGACGATCGTGCGACGC 22613 | | || ||||||||||| |||||||||| |||||||| ||||| |||||||| Sbjct 181 GCTCTCGTAGTTCTCGATCTGGTCGCGCTTGGCGTTGTCCTCGATCTTGCGACGC 235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 102952929438034