Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq76306 159 8e-34 seq28654 149 1e-30 seq27512 147 5e-30 seq27511 141 2e-28 >seq76306 Length=316 Score = 159 bits (176), Expect = 8e-34 Identities = 168/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 || || | |||||| | ||| | ||| || || || || ||||| || || | | || Sbjct 277 CTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGACAATGTG 218 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | ||||||||| || ||||| || ||||| || |||| |||||| ||||||||||||||| Sbjct 217 CGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCT 158 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099 || ||||||||||| ||| ||| ||||| || || || || ||| ||||||||| | Sbjct 157 TCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAAT 98 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || |||||||||||||| | |||||| Sbjct 97 GTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 57 >seq28654 Length=3315 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | ||||||||| || |||||||||||||| || || | |||||| | || || Sbjct 2402 CAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTC 2461 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | ||||| || ||||| || | |||||||| ||||||||||||||||| ||||| Sbjct 2462 TTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTC 2521 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||||||||| || || || ||||| || || ||| ||| ||||| | |||| || Sbjct 2522 TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGT 2581 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || || | ||||| || || | ||||||| Sbjct 2582 TTTACCCGTAAGTGTTTTCACAAAGATCTGCATTT 2616 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || |||||||| |||||||||||||| | | ||| | |||||||| | || Sbjct 1271 GTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTCCAATTG 1330 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || || || || || ||||||||||| || ||||| || || || || ||||| Sbjct 1331 CTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGTATTTT 1390 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||| ||||| || ||||| || ||| ||||| ||||||| |||||||| || Sbjct 1391 AGCTTTGACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTCCAGT 1450 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||| ||||| || || | |||||| Sbjct 1451 CAATGTTTTGACAAATATTTGCAT 1474 Score = 145 bits (160), Expect = 2e-29 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || |||||||| || |||||||| || | || || | |||||||| || || Sbjct 1043 GTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGTTG 1102 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||||| ||||||||||| |||||||| ||||||||||| ||||| || |||||||| || Sbjct 1103 TTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTT 1162 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || || ||||||||||| || || ||||| | || | || ||||| || Sbjct 1163 AGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAAGTTATTGTTTTTCCAGT 1222 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 | ||||| || || | ||||||| Sbjct 1223 AAGTGTTTTGACAAATATTTGCATT 1247 Score = 145 bits (160), Expect = 2e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || ||||||||||| || ||||| || | || || | |||||||| |||||| Sbjct 1500 TGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCTAGCTGC 1559 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || |||||||| |||||||| ||||| ||||| || ||||| |||||||| || Sbjct 1560 TTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCCTCTTTATCTTGAATCTTA 1619 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || || ||||||||||| || ||||| || || || | ||||| ||||| Sbjct 1620 GCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAGAGTTATAGTCTTGCCTGTT 1679 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || || || | |||||| Sbjct 1680 AGTGTCTTGACAAATATTTGCAT 1702 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| | ||| || |||||||| || ||||| || | || || | |||||||| | || Sbjct 1955 GTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTACGACCATCTTCTAATTG 2014 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || || ||||| |||||||| || ||||||||||||||||||||||| ||||| Sbjct 2015 CTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCTTGGATTTT 2074 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || || ||||| ||||| ||| ||| ||||| | |||| || ||||| || Sbjct 2075 AGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGTTTTTCCAGT 2134 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | |||||| Sbjct 2135 GAGTGTTTTAACAAAGATTTGCAT 2158 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 || || | ||| | |||||||||||| |||||||| || || | ||||| | ||||| Sbjct 807 AATACCAAGTGCAAAGTGGACTCTTTCTGAATATTATAGTCAGAGAGAGTACGGCCATCC 866 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 || |||||||| || ||||| || || |||||||| ||||| ||||| || ||||||||| Sbjct 867 TCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCT 926 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 || || || || || || ||||| ||||| || ||| ||||| | || | || Sbjct 927 TGGATCTTAGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTT 986 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||||| || ||||| || | ||||| Sbjct 987 TTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 1018 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| || ||||| ||||| || ||||| || | || || | |||||||| Sbjct 1722 ACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTGCGACCATCTTCC 1781 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | |||||||| || |||||||| || || || || || || ||||| ||||||||||| Sbjct 1782 AATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGG 1841 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| || || || ||||| || || || ||||||||| ||||||| |||||| Sbjct 1842 ATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGGGTAATGGTCTTT 1901 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| || || | ||||| Sbjct 1902 CCAGTTAGGGTTTTAACAAAAATCTGCAT 1930 Score = 105 bits (116), Expect = 1e-17 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 ||| || |||||||| || || || || | ||||| | ||||| || | ||| ||||| Sbjct 593 AGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTCTAACTGTTTACC 652 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 || ||||| || || ||||||||||| |||||||| || |||||||| || || ||| Sbjct 653 AGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTT 712 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 || || || || ||||| || ||||| || | || | ||||| || || | ||| Sbjct 713 AACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGTCTTCCCAGTAAGAGT 772 Query 195123 TTTTACGAACACTTGCAT 195140 || || || | ||||| Sbjct 773 CTTAACAAAGATCTGCAT 790 Score = 102 bits (112), Expect = 2e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || || || ||||||||||| ||||| | | || | |||||||| || || Sbjct 2184 TGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCATCTTCCAGTTGT 2243 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || || ||||| | ||||| ||||| ||||| || ||||||||||| || ||| Sbjct 2244 TTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTTT 2303 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || || || || ||||| || || || || | || | || |||||||| Sbjct 2304 GCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTGATGGTTTTTCCTGTA 2363 Query 195118 AAAGTTTTTACGAACACTTGCATT 195141 | ||| || || || | |||||| Sbjct 2364 AGAGTCTTAACAAAGATCTGCATT 2387 >seq27512 Length=242 Score = 147 bits (162), Expect = 5e-30 Identities = 152/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 ||| || ||||| ||||||||||| || | || || | ||||| || |||||||| || Sbjct 30 AGTAGATTCTTTCTGAATATTGTAGTCTGATAGTGTACGTCCATCCTCAAGCTGCTTTCC 89 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 || || ||||| | |||||||||||||||||||||||| || |||||||||||| ||| Sbjct 90 AGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTATCTTGAATTTTTGCCTT 149 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 || || || || ||||| || || ||||| || || | ||||| || |||| || Sbjct 150 AACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCTTGCCAGTCAGTGT 209 Query 195123 TTTTACGAACACTTGCATT 195141 ||||| || | ||||||| Sbjct 210 CTTTACAAATATTTGCATT 228 >seq27511 Length=800 Score = 141 bits (156), Expect = 2e-28 Identities = 165/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || || ||||| | ||| || || || ||||||||||| || | || || Sbjct 666 TCTCAGCCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAGATAGTGT 607 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| || || || ||||||| ||| || ||||| ||||| || Sbjct 606 GCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATACC 547 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||| || |||||||| ||| || || ||||| || || ||| ||||||||| | Sbjct 546 CTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAA 487 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || | ||||| || |||| || ||||| || | ||||||| Sbjct 486 AGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 444 Score = 140 bits (154), Expect = 7e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| | ||| || || || |||||||| ||||| | | || | |||||||| ||||| Sbjct 420 GTGCAAAGTAGATTCCTTCTGAATATTATAATCTGACAATGTACGTCCATCTTCCAGCTG 361 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || ||||| || ||||| | |||||||| |||||||||||||||||||||||||| || Sbjct 360 TTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGAATGCCTTCTTTGTCTTGAATCTT 301 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||| || || || || || || ||| ||||||||| | || | || || || || Sbjct 300 TGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTGCCAGT 241 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 || || ||||| || | ||||||| Sbjct 240 CAGTGTCTTTACAAAAATTTGCATT 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1105542800594661