Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq28654 102 5e-17
seq41046 98.7 6e-16
seq27511 89.7 3e-13
seq27512 86.0 4e-12
>seq28654
Length=3315
Score = 102 bits (112), Expect = 5e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| |||||||||| || |||||| ||||| |||||||| ||||| | ||| | ||
Sbjct 2402 CAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTC 2461
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|||| || ||||| || || || | ||||| || ||| | || | || ||||||||
Sbjct 2462 TTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTC 2521
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948
||| || ||| || | | || | || | ||||| || | || |||||
Sbjct 2522 TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGT 2581
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
||| ||||| || || ||||||||||||||||| ||
Sbjct 2582 TTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 2617
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829
|| |||||||| | ||| ||||||||||| |||||||| || || | || ||||
Sbjct 807 AATACCAAGTGCAAAGTGGACTCTTTCTGAATATTATAGTCAGAGAGAGTACGGCCATCC 866
Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889
|||||||| || || || || || || ||||| || ||| | || | ||||| |||||
Sbjct 867 TCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCT 926
Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949
||||| ||| || | | || | || || ||||| || | || || |||
Sbjct 927 TGGATCTTAGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTT 986
Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || || ||||| |||||||||||||||
Sbjct 987 TTCCCTGTCAGTGTCTTTACAAAGATCTGCATA 1019
Score = 96.9 bits (106), Expect = 2e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
|||||| || |||||||||||||| || | || |||| || | |||||| || |||||
Sbjct 599 TTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAA 658
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || || |||||| | || | ||||||||||| ||||| || ||
Sbjct 659 GATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATT 718
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | || | || | ||| || || | || ||||| || || || |||||||| ||
Sbjct 719 TTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAAC 778
Query 34970 AAAGATCTGCATA 34982
|||||||||||||
Sbjct 779 AAAGATCTGCATA 791
>seq41046
Length=7774
Score = 98.7 bits (108), Expect = 6e-16
Identities = 150/210 (71%), Gaps = 4/210 (2%)
Strand=Plus/Plus
Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833
|||| || | |||| ||| || |||||||| ||||| || | | ||| |||| || |
Sbjct 7174 CAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTA 7233
Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893
| ||||| || ||||| || | |||||||||||| | || | || ||||| || |
Sbjct 7234 GTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGA 7293
Query 34894 TCTT--CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
| || || ||| || | |||| | ||| |||||| || |||| ||| ||||||||
Sbjct 7294 TTTTAGCT-TTTAACATTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTT 7352
Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| || ||||| || || || |||||
Sbjct 7353 ACCCGTAAGGGTCTTGACGAAAATTTGCAT 7382
>seq27511
Length=800
Score = 89.7 bits (98), Expect = 3e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
|||| ||||| | | || |||||||| | || ||| |||||||| ||||| || |
Sbjct 445 TTCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTCTGAATATTATAATCTG 386
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
| | | ||| |||| |||||||||||||| ||||| || || | || ||||| | |
Sbjct 385 ACAATGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAG 326
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932
| | || || ||||| |||||| || || | |||| | ||| || || |
Sbjct 325 GAATGCCTTCTTTGTCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCA 266
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | || || ||||| || || || ||||| ||||| || |||||
Sbjct 265 CTTCCAAAGTGATAGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 217
>seq27512
Length=242
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
|||||||||||| || ||||| || || | ||| |||| || ||||| ||||| |||||
Sbjct 36 TTCTTTCTGAATATTGTAGTCTGATAGTGTACGTCCATCCTCAAGCTGCTTTCCAGCAAA 95
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || | ||| |||||| | || | || ||||| || ||| || || ||
Sbjct 96 AATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTATCTTGAATTTTTGCCTTAACATT 155
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | || | ||| || |||||| || | || || || || || || || ||||| ||
Sbjct 156 TTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTAC 215
Query 34970 AAAGATCTGCAT 34981
||| || |||||
Sbjct 216 AAATATTTGCAT 227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323537328868824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |