Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_015466.1 Length=62668 Score E Sequences producing significant alignments: (Bits) Value seq52268 100 1e-16 >seq52268 Length=4154 Score = 100 bits (110), Expect = 1e-16 Identities = 187/269 (70%), Gaps = 12/269 (4%) Strand=Plus/Minus Query 14496 GATCGTGTCGGTGATAAGCTGGTCAATCACCTTGGGCTCGAGAGCGTCCAGCTCCCAGCT 14555 |||| |||| ||| | |||||| || || |||| |||| ||||| |||||||| | Sbjct 980 GATCTCGTCGTCGATCAACTGGTCGATGACGCGGGGCGCGAGCGCGTCGAGCTCCCA-CG 922 Query 14556 ATG-CGGTCCGTATTTGGACACATAG--GCCTTCGCCCGGCTGTCGGTCTCTTTGGCAGG 14612 | | | | |||| ||| | || ||| ||| || |||||| || || || Sbjct 921 ACGACCGACCGTGCATGGCGATGTACCCGCCGGCGCGCGA--GTCGGTGATCTTCGCCGG 864 Query 14613 GTTCGGCGGCGGAGCATAGTGCTCGACCTGATCCATATTCAGAGCGATGCGTCGCACCTC 14672 |||||||||||| || ||||||| ||| ||||| ||||| |||||||| |||||||| Sbjct 863 GTTCGGCGGCGGGCTGTACTGCTCGATCTGGTCCATGTTCAGGGCGATGCGCCGCACCTC 804 Query 14673 GACACCTTGGTCTTCCGCGAACAGGCGAAGCCGGTCGGTGTTGTCGTCGGTCATATTCAG 14732 | ||| | |||||||| || ||||| | ||||| |||||| | | Sbjct 803 G-----GTGG-AGGCGCCGAACAGGGCGAGGCGGTCCTCGATGTCGCGGGTCATGTCGAT 750 Query 14733 GCCAGAGGGGTCGTGGTCGGCAAGGTGGA 14761 ||| || |||||||||||| | ||||||| Sbjct 749 GCCGGACGGGTCGTGGTCGCCGAGGTGGA 721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199736016182927