Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_015584.1 Length=75960 Score E Sequences producing significant alignments: (Bits) Value seq136878 82.4 4e-11 >seq136878 Length=1830 Score = 82.4 bits (90), Expect = 4e-11 Identities = 195/291 (67%), Gaps = 8/291 (3%) Strand=Plus/Minus Query 55498 GGCAACCTTACCGCTGATCCGGAATTGCGGTTCCTTGAGTCGGGCGTGGCCGTCGCTCAG 55557 || ||||| ||||| ||||| ||| |||| ||| ||| || | ||| || || | Sbjct 375 GGGAACCTGACCGCGGATCCCGAACTGCGTTTCACCCCGTCCGGTGCGGCGGTGGCCAAC 316 Query 55558 TTCTCCGTGGCGTCTACGCCTCGGGT-TAAGA-----AGGGCGACGAGTGGGTGGACGGT 55611 ||| |||| ||||| ||||| ||| | | || || | |||| ||| ||||| Sbjct 315 TTCACCGTTGCGTCCACGCCGCGGATGTTCGACCGTCAGACCAACGAATGGAAAGACGGC 256 Query 55612 GAGACGGTGTTCCTCCGTACCACTGTGTGGCGCGAGCTGGCTGAGGGTGCCGCTGAGGCC 55671 ||| | ||||| | || || | ||||| ||| ||| ||| | || ||| | Sbjct 255 GAGGCACTGTTCATGCGGTGCAGCATCTGGCGGGAGGCGGCCGAGAACGTGGCGGAGAGC 196 Query 55672 CTGCGTAAGGGTGACTC-TGTTGTGGTGATCGGCAAGCTCAAGCAGCGGTCGTTTGAGAC 55730 || ||||||| ||| ||| | ||| || |||||||||||| || | || || Sbjct 195 CTCACCAAGGGTG-CTCGTGTCATCGTGTCGGGTCGGCTCAAGCAGCGCTCCTACGAAAC 137 Query 55731 CCGCGAGGGTGAGAAGCGGTCCGTGTTTGAAATCGACGGCGAGTTCGTCGG 55781 |||||||||||||||||| | ||| | || |||| | |||| ||||| Sbjct 136 CCGCGAGGGTGAGAAGCGCACGGTGGTCGAGCTCGAGGTCGAGGAGGTCGG 86 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242126779680723