Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_015720.1 Length=45530 Score E Sequences producing significant alignments: (Bits) Value seq199668 87.8 5e-13 >seq199668 Length=559 Score = 87.8 bits (96), Expect = 5e-13 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 10111 ATGATCGGTCAGCGCATGGCGCCGCTGCTGACTGCGTTCCGTGACCTTCGCCAGGAGATC 10170 |||||||||||||| ||||||||||||||| | | ||| ||| ||| ||||| || Sbjct 233 ATGATCGGTCAGCGGATGGCGCCGCTGCTGTCGTCATTCAAGTCCCTCCGCGAGGAGGTC 174 Query 10171 GTCGGCAACTTCAGTCAGGCGCTTGTTCCCGCATTCGAGAAGACCGGCGGCCTGATCTCG 10230 || ||| |||| || | | ||| ||| |||||||||||||| ||| Sbjct 173 ACCGACAAGTTCACCACCGCCATGGCCGGCGCGTTCACCAAGACCGGCGGCCTCATCGAC 114 Query 10231 AACCTGCAGGGACC---GCTCGGCGGCCTGTCGACTACGCTGGGTCGGATCGGTACTCAG 10287 | ||||| |||| ||| || ||||||||||| ||| || | ||||| || ||| Sbjct 113 ACCCTGC---GACCGAAGCTGGGTGGCCTGTCGACGGTGCTCGGCGGCATCGGCACCCAG 57 Query 10288 ATCGCCCAGTCGATC 10302 ||||| ||||||| Sbjct 56 ATCGCGACGTCGATC 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145095407726232