Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_016650.1 Length=48072 Score E Sequences producing significant alignments: (Bits) Value seq4597 113 1e-20 seq179780 84.2 7e-12 >seq4597 Length=157418 Score = 113 bits (124), Expect = 1e-20 Identities = 593/920 (64%), Gaps = 54/920 (6%) Strand=Plus/Plus Query 28695 TCGTTCACCTCTACCGAGATATTCGTCGTCCAGTGCTTGCCGGACTGGGCCTTGCAGTGG 28754 |||| ||||| || ||||| ||||| |||||||| || | | ||||||||||| | Sbjct 124419 TCGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGCCTTGCAGTTG 124478 Query 28755 ATGAACTCCAGGATCTGGGGGTCATCCCAGCGCATCATCGCCATGCGAGCTGAGCGGCGA 28814 ||||| || | || | ||||| |||||| |||||| ||||| || || || || || Sbjct 124479 ATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGACGT 124538 Query 28815 TTGCCGCCCGACACAACGCATTCCGCGAGATGGTGGTCGATCTCCATTGCCCCGAGACCC 28874 || || | || ||| || |||||| | ||||||||||| ||| ||| ||| || Sbjct 124539 GCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATGCCG 124598 Query 28875 GTGAGCTTCTGGCCCTCGAAGTCGTTCATCACGTCGGCAATGTCCTTGAGCATC---TTC 28931 || || | |||| | ||| | ||| | ||| ||| ||| || Sbjct 124599 GTCAGGTGACGGCCGGTTGCCTTGTTGAGGGTGTCTGTGATG---CTGACAATCGATGTC 124655 Query 28932 GCCAGAGGCATCGGCCCCGAGGCCGTGCCGCCGAAGGTCTTGAGTCGCGCTCCGCGACCT 28991 |||| ||| || || || || || || ||||| ||||| | | | ||| | ||| Sbjct 124656 GCCAAAGGTGCTGGGCCAGAAGCGGTTCCACCGAATGTCTTCAACGGTACGCCGTGTCCT 124715 Query 28992 CGGACCCTGGACACGTCGAACACCCGGAAG-GGGTGCTCCACGATCGGACGGTAGAACGT 29050 | ||| ||||| |||||| || | | | ||| || | |||| || |||| Sbjct 124716 CTGACATCGGACAGGTCGAAGACGAGTCCGTGCATGC-CCTC-TTCGGTCG-----ACGT 124768 Query 29051 ATCGAGCAGGTCCACGAGGGCACCTGCCCAGCCCTCGCGGCTGTCCTCCACCTCGT-AG- 29108 || | |||||||| || | ||||||||| |||| |||||||||| | | || Sbjct 124769 GTCAATCAGGTCCAGCCATGCTGCGACCCAGCCCTGGCGGGTGTCCTCCACGACATGAGT 124828 Query 29109 GCACCAGC--CCAGTCGGAGTTGTACCGCTTGGACAGGAGTCCTGCCTGCTCC-AGCT-- 29163 || |||| | | | | |||| | || ||||| |||||||||||| | | Sbjct 124829 GCGGCAGCTTTCCGGC-GCCTTGT---CCATGAACAGGCTGCCTGCCTGCTCCTTGGTTG 124884 Query 29164 CTGCGTAATCCGGGTGAGCCGGATCGCAGACGATCTCGACCTC---CAGGCATTGCTGGA 29220 ||||||| |||||||||| | ||| || | | || || | ||||| | ||| Sbjct 124885 CTGCGTAGTCCGGGTGAGAC---TCGGCGATGGTGACGCCCACGAACAGGCTGCCCAGGA 124941 Query 29221 CCTCGTCGTACTGCTCCAGGTACCGGTTC---GAGTAGTTCGCCCCGACGCCACCGCCTT 29277 ||| | | || || | | ||| | |||||||| || ||||| || ||||| | Sbjct 124942 --TCGGCTGAGTG-GCCTTGATCAGGTGCTGTGAGTAGTTGGCGCCGACACCGCCGCCCT 124998 Query 29278 CCATGAGGCGCATGAACG---TGAACTCGAAGTGGTCCGAGAGACGCT-CGTTCCAGTGG 29333 | | || || | ||| ||||| ||||||||| | | | | | ||| | Sbjct 124999 CGAACAGACG---GGACGCGAGGAACTTGAAGTGGTCACTG-GTCTTTGCCGACCATCCG 125054 Query 29334 CTCACGTGGCAGTTGAAGAGGTATTGCCTGCCC--TTCACACCCGACGCCCACAGGTGCC 29391 ||| |||||| ||| | | | | | || || | |||||||||| | Sbjct 125055 GAGACGAAACAGTTG-CGAGAGAACGGGTTCACGGTT----CCGGTGACCCACAGGTGGC 125109 Query 29392 GGCCAGCGGGCAGGATCTTGAAGTCCCGGATCATCTCGACCAGGTCGTCCCGCTC-ACCG 29450 | || || || || |||||||||| ||||| |||| || || || ||||| || Sbjct 125110 GTCCGGCCGGGAGCATCTTGAAGTTGTAGATCAGGTCGAACAAATCCTCACGCTCGTTCG 125169 Query 29451 GGCATGTGGTATCGCTCGTCAACGAGACCCAGGTTGCCGTCCACGACCCGCTCGACCGTC 29510 || ||| | || ||| |||||||||||||| || || || ||| ||| Sbjct 125170 GGAGCCAGGTTGAGGACG-GGACGTAGCCCAGGTTGCCGTCGACCACACGTGAGACGGTC 125228 Query 29511 TCGGGCCAGGTCTCCTTCGTGCCGTCAGGCTTGGTCCGCGAGTAGGTGCGGTTGTAGACC 29570 ||| ||| ||||||||||| |||||||||||| | || |||||| |||| ||| ||| Sbjct 125229 TCGAACCATGTCTCCTTCGTACCGTCAGGCTTGATGCGACTGTAGGTCCGGTCGTATACC 125288 Query 29571 AACTCGCCCTGCGGTCCCCA 29590 || ||| ||||||||| Sbjct 125289 TCCTTGCCGATCGGTCCCCA 125308 >seq179780 Length=763 Score = 84.2 bits (92), Expect = 7e-12 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 46643 GGGCACGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGT 46702 |||||| |||||||| ||| |||||| ||||||||||| ||| |||||||||||| ||| Sbjct 577 GGGCAC-TAGCTCAACTGGCAGAGCATCGGTCTCCAAAACCGAAGGTTGGGGGTTCAAGT 519 Query 46703 CCCTCCGGGCCTGCAA 46718 ||||| | ||||||| Sbjct 518 CCCTCGTGCCCTGCAA 503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153203042616764