Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_016650.1
Length=48072
Score E
Sequences producing significant alignments: (Bits) Value
seq4597 113 1e-20
seq179780 84.2 7e-12
>seq4597
Length=157418
Score = 113 bits (124), Expect = 1e-20
Identities = 593/920 (64%), Gaps = 54/920 (6%)
Strand=Plus/Plus
Query 28695 TCGTTCACCTCTACCGAGATATTCGTCGTCCAGTGCTTGCCGGACTGGGCCTTGCAGTGG 28754
|||| ||||| || ||||| ||||| |||||||| || | | ||||||||||| |
Sbjct 124419 TCGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGCCTTGCAGTTG 124478
Query 28755 ATGAACTCCAGGATCTGGGGGTCATCCCAGCGCATCATCGCCATGCGAGCTGAGCGGCGA 28814
||||| || | || | ||||| |||||| |||||| ||||| || || || || ||
Sbjct 124479 ATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGACGT 124538
Query 28815 TTGCCGCCCGACACAACGCATTCCGCGAGATGGTGGTCGATCTCCATTGCCCCGAGACCC 28874
|| || | || ||| || |||||| | ||||||||||| ||| ||| ||| ||
Sbjct 124539 GCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATGCCG 124598
Query 28875 GTGAGCTTCTGGCCCTCGAAGTCGTTCATCACGTCGGCAATGTCCTTGAGCATC---TTC 28931
|| || | |||| | ||| | ||| | ||| ||| ||| ||
Sbjct 124599 GTCAGGTGACGGCCGGTTGCCTTGTTGAGGGTGTCTGTGATG---CTGACAATCGATGTC 124655
Query 28932 GCCAGAGGCATCGGCCCCGAGGCCGTGCCGCCGAAGGTCTTGAGTCGCGCTCCGCGACCT 28991
|||| ||| || || || || || || ||||| ||||| | | | ||| | |||
Sbjct 124656 GCCAAAGGTGCTGGGCCAGAAGCGGTTCCACCGAATGTCTTCAACGGTACGCCGTGTCCT 124715
Query 28992 CGGACCCTGGACACGTCGAACACCCGGAAG-GGGTGCTCCACGATCGGACGGTAGAACGT 29050
| ||| ||||| |||||| || | | | ||| || | |||| || ||||
Sbjct 124716 CTGACATCGGACAGGTCGAAGACGAGTCCGTGCATGC-CCTC-TTCGGTCG-----ACGT 124768
Query 29051 ATCGAGCAGGTCCACGAGGGCACCTGCCCAGCCCTCGCGGCTGTCCTCCACCTCGT-AG- 29108
|| | |||||||| || | ||||||||| |||| |||||||||| | | ||
Sbjct 124769 GTCAATCAGGTCCAGCCATGCTGCGACCCAGCCCTGGCGGGTGTCCTCCACGACATGAGT 124828
Query 29109 GCACCAGC--CCAGTCGGAGTTGTACCGCTTGGACAGGAGTCCTGCCTGCTCC-AGCT-- 29163
|| |||| | | | | |||| | || ||||| |||||||||||| | |
Sbjct 124829 GCGGCAGCTTTCCGGC-GCCTTGT---CCATGAACAGGCTGCCTGCCTGCTCCTTGGTTG 124884
Query 29164 CTGCGTAATCCGGGTGAGCCGGATCGCAGACGATCTCGACCTC---CAGGCATTGCTGGA 29220
||||||| |||||||||| | ||| || | | || || | ||||| | |||
Sbjct 124885 CTGCGTAGTCCGGGTGAGAC---TCGGCGATGGTGACGCCCACGAACAGGCTGCCCAGGA 124941
Query 29221 CCTCGTCGTACTGCTCCAGGTACCGGTTC---GAGTAGTTCGCCCCGACGCCACCGCCTT 29277
||| | | || || | | ||| | |||||||| || ||||| || ||||| |
Sbjct 124942 --TCGGCTGAGTG-GCCTTGATCAGGTGCTGTGAGTAGTTGGCGCCGACACCGCCGCCCT 124998
Query 29278 CCATGAGGCGCATGAACG---TGAACTCGAAGTGGTCCGAGAGACGCT-CGTTCCAGTGG 29333
| | || || | ||| ||||| ||||||||| | | | | | ||| |
Sbjct 124999 CGAACAGACG---GGACGCGAGGAACTTGAAGTGGTCACTG-GTCTTTGCCGACCATCCG 125054
Query 29334 CTCACGTGGCAGTTGAAGAGGTATTGCCTGCCC--TTCACACCCGACGCCCACAGGTGCC 29391
||| |||||| ||| | | | | | || || | |||||||||| |
Sbjct 125055 GAGACGAAACAGTTG-CGAGAGAACGGGTTCACGGTT----CCGGTGACCCACAGGTGGC 125109
Query 29392 GGCCAGCGGGCAGGATCTTGAAGTCCCGGATCATCTCGACCAGGTCGTCCCGCTC-ACCG 29450
| || || || || |||||||||| ||||| |||| || || || ||||| ||
Sbjct 125110 GTCCGGCCGGGAGCATCTTGAAGTTGTAGATCAGGTCGAACAAATCCTCACGCTCGTTCG 125169
Query 29451 GGCATGTGGTATCGCTCGTCAACGAGACCCAGGTTGCCGTCCACGACCCGCTCGACCGTC 29510
|| ||| | || ||| |||||||||||||| || || || ||| |||
Sbjct 125170 GGAGCCAGGTTGAGGACG-GGACGTAGCCCAGGTTGCCGTCGACCACACGTGAGACGGTC 125228
Query 29511 TCGGGCCAGGTCTCCTTCGTGCCGTCAGGCTTGGTCCGCGAGTAGGTGCGGTTGTAGACC 29570
||| ||| ||||||||||| |||||||||||| | || |||||| |||| ||| |||
Sbjct 125229 TCGAACCATGTCTCCTTCGTACCGTCAGGCTTGATGCGACTGTAGGTCCGGTCGTATACC 125288
Query 29571 AACTCGCCCTGCGGTCCCCA 29590
|| ||| |||||||||
Sbjct 125289 TCCTTGCCGATCGGTCCCCA 125308
>seq179780
Length=763
Score = 84.2 bits (92), Expect = 7e-12
Identities = 65/76 (86%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 46643 GGGCACGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGT 46702
|||||| |||||||| ||| |||||| ||||||||||| ||| |||||||||||| |||
Sbjct 577 GGGCAC-TAGCTCAACTGGCAGAGCATCGGTCTCCAAAACCGAAGGTTGGGGGTTCAAGT 519
Query 46703 CCCTCCGGGCCTGCAA 46718
||||| | |||||||
Sbjct 518 CCCTCGTGCCCTGCAA 503
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 153203042616764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |