Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_016653.1 Length=46586 Score E Sequences producing significant alignments: (Bits) Value seq4597 105 2e-18 seq179780 80.6 8e-11 >seq4597 Length=157418 Score = 105 bits (116), Expect = 2e-18 Identities = 141/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 28020 GAACCTCTGGTCAACTTCGACGGAGATGTTCGTGGTCCAGTGCTT--ACCGGACTGCGCT 28077 ||||| | ||| || |||||||||||||||||||||||||| | ||| | | || Sbjct 124412 GAACCGGTCGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGCC-- 124469 Query 28078 TTGCAGTGGATGAACTCGAAAATCTGTGGGTCATCCCAGCGCATCATTGCCATTCGAGCC 28137 ||||||| |||||| ||||| | | ||||| |||||| |||||||||||| || || Sbjct 124470 TTGCAGTTGATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCG 124529 Query 28138 GAACGGCGATTACCGCCAGACACAACACATTCCGCGAGATGATGGTCAATCTCCATCGCT 28197 || || || ||| || | || || || |||||| | ||||| |||| ||| || Sbjct 124530 GACCGACGTGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCC 124589 Query 28198 CCCAGACCGGTCAG 28211 | | |||||||| Sbjct 124590 TCGATGCCGGTCAG 124603 >seq179780 Length=763 Score = 80.6 bits (88), Expect = 8e-11 Identities = 68/81 (84%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 45156 TCTAGGGCACGTAGCTCAATTGGATAGAGCCCCGGTCTCCAAAGCCGGTGGTTGGGGGTT 45215 |||||||||| |||||||| ||| ||||| ||||||||||| ||| ||||||||||| Sbjct 581 TCTAGGGCAC-TAGCTCAACTGGC-AGAGCATCGGTCTCCAAAACCGAAGGTTGGGGGTT 524 Query 45216 CGAGTCCCTCCGGGCCTGCAA 45236 | |||||||| | ||||||| Sbjct 523 CAAGTCCCTCGTGCCCTGCAA 503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148463488939608